RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 DNAI1Q9UI46 699 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 LTBP2Q14767 1821 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 TNPO2O14787 897 aaKnown RBP10.86□□□□□ -0.67
NEDD1-203ENST00000429527 NTRK3Q16288 839 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 CCDC129Q6ZRS4 1044 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 OGDHLQ9ULD0 1010 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 CCDC85CA6NKD9 419 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 SMIM22K7EJ46 135 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 TULP2O00295 520 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 SPTLC2O15270 562 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 CBFA2T2O43439 604 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 ADCY3O60266 1144 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 FMNL1O95466 1100 aaPredicted RBP10.85□□□□□ -0.67
NEDD1-203ENST00000429527 FLT3LGP49771 235 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 ETF1P62495 437 aaKnown RBP10.85□□□□□ -0.67
NEDD1-203ENST00000429527 TUBB4BP68371 445 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 CBX1P83916 185 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 Q3C1V9 767 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 ANO1Q5XXA6 986 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 SPATC1LQ9H0A9 340 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 DNAJC25-GNG10A0A024R161 153 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 TADA3O75528 432 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 FGAP02671 866 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 GHRHRQ02643 423 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 DPCR1Q3MIW9 517 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 AOPEPQ8N6M6 819 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 TCEANC2Q96MN5 208 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 NUDT12Q9BQG2 462 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 RNF41Q9H4P4 317 aaPredicted RBP10.85□□□□□ -0.67
NEDD1-203ENST00000429527 IL17RBQ9NRM6 502 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 ZNF214Q9UL59 606 aaPredicted RBP10.85□□□□□ -0.67
NEDD1-203ENST00000429527 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.85□□□□□ -0.67
NEDD1-203ENST00000429527 EFCAB8A8MWE9 144 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 TUBB2AQ13885 445 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 RSRC2Q7L4I2 434 aaKnown RBP10.85□□□□□ -0.67
NEDD1-203ENST00000429527 RAET1EQ8TD07 263 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 TUBB2BQ9BVA1 445 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 SLC38A10Q9HBR0 1119 aa10.85□□□□□ -0.67
NEDD1-203ENST00000429527 DOCK3Q8IZD9 2030 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 RPTORQ8N122 1335 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 VWA5AO00534 786 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 CUTAO60888 179 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 ZNF202O95125 648 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 CCL5P13501 91 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 LIFRP42702 1097 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 MORC4Q8TE76 937 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 XPO4Q9C0E2 1151 aaKnown RBP10.84□□□□□ -0.67
NEDD1-203ENST00000429527 SH2B2O14492 632 aaPredicted RBP10.84□□□□□ -0.67
NEDD1-203ENST00000429527 NDUFB10O96000 172 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 ARID5BQ14865 1188 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 AKNAD1Q5T1N1 836 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 MAMDC4Q6UXC1 1216 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 DGKHQ86XP1 1220 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 ZNF444Q8N0Y2 327 aaPredicted RBP10.84□□□□□ -0.67
NEDD1-203ENST00000429527 CEP95Q96GE4 821 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 TMEM87BQ96K49 555 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 SLF1Q9BQI6 1058 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 MOV10L1Q9BXT6 1211 aaKnown RBP10.84□□□□□ -0.67
NEDD1-203ENST00000429527 PSD3Q9NYI0 1048 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 CLIC4Q9Y696 253 aa10.84□□□□□ -0.67
NEDD1-203ENST00000429527 FANCGO15287 622 aa10.83□□□□□ -0.67
NEDD1-203ENST00000429527 INHAP05111 366 aa10.83□□□□□ -0.67
NEDD1-203ENST00000429527 PFKFB1P16118 471 aa10.83□□□□□ -0.67
NEDD1-203ENST00000429527 CYP2C19P33261 490 aa10.83□□□□□ -0.67
NEDD1-203ENST00000429527 BMS1Q14692 1282 aaKnown RBP10.83□□□□□ -0.67
NEDD1-203ENST00000429527 ZNF792Q3KQV3 632 aa10.83□□□□□ -0.67
NEDD1-203ENST00000429527 MKNK2Q9HBH9 465 aa10.83□□□□□ -0.67
NEDD1-203ENST00000429527 POTEFA5A3E0 1075 aa10.83□□□□□ -0.68
NEDD1-203ENST00000429527 KIF28PB7ZC32 967 aa10.83□□□□□ -0.68
NEDD1-203ENST00000429527 F5H6K3 240 aa10.83□□□□□ -0.68
NEDD1-203ENST00000429527 SGPL1O95470 568 aa10.83□□□□□ -0.68
NEDD1-203ENST00000429527 PBX1P40424 430 aa10.83□□□□□ -0.68
NEDD1-203ENST00000429527 MNX1P50219 401 aaPredicted RBP10.83□□□□□ -0.68
NEDD1-203ENST00000429527 KLRC3Q07444 240 aa10.83□□□□□ -0.68
NEDD1-203ENST00000429527 STK3Q13188 491 aa10.83□□□□□ -0.68
NEDD1-203ENST00000429527 MUM1L1Q5H9M0 696 aa10.83□□□□□ -0.68
NEDD1-203ENST00000429527 CHST13Q8NET6 341 aa10.83□□□□□ -0.68
NEDD1-203ENST00000429527 HNRNPLLQ8WVV9 542 aaKnown RBP10.83□□□□□ -0.68
NEDD1-203ENST00000429527 FTOQ9C0B1 505 aaKnown RBP eCLIP10.83□□□□□ -0.68
NEDD1-203ENST00000429527 PORCNQ9H237 461 aa10.83□□□□□ -0.68
NEDD1-203ENST00000429527 ORC3Q9UBD5 711 aaPredicted RBP10.83□□□□□ -0.68
NEDD1-203ENST00000429527 SYNGAP1Q96PV0 1343 aa10.83□□□□□ -0.68
NEDD1-203ENST00000429527 TPM4P67936 248 aa10.83□□□□□ -0.68
NEDD1-203ENST00000429527 TMEM132BQ14DG7 1078 aa10.83□□□□□ -0.68
NEDD1-203ENST00000429527 PRPF38AQ8NAV1 312 aaKnown RBP10.83□□□□□ -0.68
NEDD1-203ENST00000429527 NCOA7Q8NI08 942 aa10.83□□□□□ -0.68
NEDD1-203ENST00000429527 TRIB2Q92519 343 aa10.83□□□□□ -0.68
NEDD1-203ENST00000429527 RANBP17Q9H2T7 1088 aaKnown RBP10.83□□□□□ -0.68
NEDD1-203ENST00000429527 ARHGAP6O43182 974 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 CDKL5O76039 1030 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 TOP1P11387 765 aaKnown RBP10.82□□□□□ -0.68
NEDD1-203ENST00000429527 COL6A1P12109 1028 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 MYL5Q02045 173 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 SEMA3FQ13275 785 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 IMMTQ16891 758 aaKnown RBP10.82□□□□□ -0.68
NEDD1-203ENST00000429527 SHC4Q6S5L8 630 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 KIFC2Q96AC6 838 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 DDX11Q96FC9 970 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 TMEM106CQ9BVX2 250 aa10.82□□□□□ -0.68
NEDD1-203ENST00000429527 CNNM2Q9H8M5 875 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms