RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 CC2D2BQ6DHV5 1058 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 PLEKHG1Q9ULL1 1385 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 LOC102724428A0A0B4J2F2 783 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 HNRNPDLO14979 420 aaKnown RBP13.94□□□□□ -0.18
LDB3-205ENST00000429277 SIK1P57059 783 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 MIS18BP1Q6P0N0 1132 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 CNOT6LQ96LI5 555 aaKnown RBP13.94□□□□□ -0.18
LDB3-205ENST00000429277 ANO3Q9BYT9 981 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 ANAPC5Q9UJX4 755 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 CFAP74Q9C0B2 1584 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 ZNF500O60304 480 aaPredicted RBP13.94□□□□□ -0.18
LDB3-205ENST00000429277 GSPT1P15170 499 aaKnown RBP13.94□□□□□ -0.18
LDB3-205ENST00000429277 METTL23Q86XA0 190 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 LRRC8AQ8IWT6 810 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 TUBGCP2Q9BSJ2 902 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 SLC39A2Q9NP94 309 aa13.94□□□□□ -0.18
LDB3-205ENST00000429277 SPDYE16A6NNV3 312 aaPredicted RBP13.93□□□□□ -0.18
LDB3-205ENST00000429277 GUCY2FP51841 1108 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 GNGT1P63211 74 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 ZNF449Q6P9G9 518 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 RAB44Q7Z6P3 723 aaPredicted RBP13.93□□□□□ -0.18
LDB3-205ENST00000429277 SCYL1Q96KG9 808 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 FANCLQ9NW38 375 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 CLASP1Q7Z460 1538 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 TTC36A6NLP5 189 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 MED7O43513 233 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 HSPA8P11142 646 aaKnown RBP13.93□□□□□ -0.18
LDB3-205ENST00000429277 PSMD2Q13200 908 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 CCDC170Q8IYT3 715 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 NME8Q8N427 588 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 RABGGTAQ92696 567 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 TTC1Q99614 292 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 ATP8B3O60423 1300 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 F8W8V4 182 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 PPEF1O14829 653 aaPredicted RBP13.93□□□□□ -0.18
LDB3-205ENST00000429277 AFPP02771 609 aaKnown RBP13.93□□□□□ -0.18
LDB3-205ENST00000429277 SLC8A1P32418 973 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 ITKQ08881 620 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 MAN2A1Q16706 1144 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 RNF169Q8NCN4 708 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 LRRC8CQ8TDW0 803 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 UBE2Q2Q8WVN8 375 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 MRPL47Q9HD33 250 aaKnown RBP13.93□□□□□ -0.18
LDB3-205ENST00000429277 NUB1Q9Y5A7 615 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 ARHGAP42A6NI28 874 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 IL9RQ01113 521 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 GPKOWQ92917 476 aaPredicted RBP eCLIP13.93□□□□□ -0.18
LDB3-205ENST00000429277 CCDC127Q96BQ5 260 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 CAPS2Q9BXY5 557 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 H7C0C1 242 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 RFC1P35251 1148 aaPredicted RBP13.93□□□□□ -0.18
LDB3-205ENST00000429277 ATP5OP48047 213 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 FKBP3Q00688 224 aaKnown RBP13.93□□□□□ -0.18
LDB3-205ENST00000429277 EDC3Q96F86 508 aaKnown RBP13.93□□□□□ -0.18
LDB3-205ENST00000429277 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.93□□□□□ -0.18
LDB3-205ENST00000429277 SLC12A6Q9UHW9 1150 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 KIAA1024Q9UPX6 916 aa13.93□□□□□ -0.18
LDB3-205ENST00000429277 ZFYVE16Q7Z3T8 1539 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 INHBAP08476 426 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 CCDC24Q8N4L8 307 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 MGARPQ8TDB4 240 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 ZNF577Q9BSK1 485 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 BAIAP2L1Q9UHR4 511 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 MUM1Q2TAK8 710 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 APOA5Q6Q788 366 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 TDRD7Q8NHU6 1098 aaKnown RBP13.92□□□□□ -0.18
LDB3-205ENST00000429277 P2RX5Q93086 422 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 CDC23Q9UJX2 597 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 THRAP3Q9Y2W1 955 aaKnown RBP13.92□□□□□ -0.18
LDB3-205ENST00000429277 GPC4O75487 556 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 NXNQ6DKJ4 435 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 ABI1Q8IZP0 508 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 LSG1Q9H089 658 aaKnown RBP13.92□□□□□ -0.18
LDB3-205ENST00000429277 AP5M1Q9H0R1 490 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 TRPC5Q9UL62 973 aaPredicted RBP13.92□□□□□ -0.18
LDB3-205ENST00000429277 PHLPP2Q6ZVD8 1323 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 ATP7BP35670 1465 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 NR2F2P24468 414 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 LRRC24Q50LG9 513 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 MID2Q9UJV3 735 aa13.92□□□□□ -0.18
LDB3-205ENST00000429277 BUB1O43683 1085 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 NDUFA8P51970 172 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 GJA10Q969M2 543 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 ERVV-1B6SEH8 477 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 SUN1O94901 812 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 TTC4O95801 387 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 SCNN1DP51172 638 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 FAM160B2Q86V87 743 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 EFCAB13Q8IY85 973 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 FAM186BQ8IYM0 893 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.91□□□□□ -0.18
LDB3-205ENST00000429277 GBP5Q96PP8 586 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 ANKFY1Q9P2R3 1169 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 ARMC9Q7Z3E5 817 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 GREM2Q9H772 168 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 EFCC1Q9HA90 598 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 PCDHB4Q9Y5E5 795 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 GOLGA8HP0CJ92 632 aa13.91□□□□□ -0.18
LDB3-205ENST00000429277 PHKA1P46020 1223 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms