RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 CYP2C9P11712 490 aa18.15■□□□□ 0.5
SEC13-210ENST00000428626 NT5C2P49902 561 aa18.15■□□□□ 0.5
SEC13-210ENST00000428626 PTH1RQ03431 593 aa18.15■□□□□ 0.5
SEC13-210ENST00000428626 ASPRV1Q53RT3 343 aa18.15■□□□□ 0.5
SEC13-210ENST00000428626 CCDC178Q5BJE1 867 aa18.15■□□□□ 0.5
SEC13-210ENST00000428626 SCLYQ96I15 445 aa18.15■□□□□ 0.5
SEC13-210ENST00000428626 VAT1LQ9HCJ6 419 aa18.15■□□□□ 0.5
SEC13-210ENST00000428626 CTNNA3Q9UI47 895 aa18.15■□□□□ 0.5
SEC13-210ENST00000428626 GBF1Q92538 1859 aa18.14■□□□□ 0.49
SEC13-210ENST00000428626 PPP1R11O60927 126 aaPredicted RBP18.14■□□□□ 0.49
SEC13-210ENST00000428626 PARP1P09874 1014 aaKnown RBP18.14■□□□□ 0.49
SEC13-210ENST00000428626 PPP2R5BQ15173 497 aa18.14■□□□□ 0.49
SEC13-210ENST00000428626 NBPF20Q3BBV1 942 aa18.14■□□□□ 0.49
SEC13-210ENST00000428626 CCDC62Q6P9F0 684 aa18.14■□□□□ 0.49
SEC13-210ENST00000428626 PSRC1Q6PGN9 363 aaPredicted RBP18.14■□□□□ 0.49
SEC13-210ENST00000428626 SCFD2Q8WU76 684 aa18.14■□□□□ 0.49
SEC13-210ENST00000428626 HERVK_113Q902F9 699 aa18.14■□□□□ 0.49
SEC13-210ENST00000428626 TIFAQ96CG3 184 aa18.14■□□□□ 0.49
SEC13-210ENST00000428626 COL25A1Q9BXS0 654 aaPredicted RBP18.14■□□□□ 0.49
SEC13-210ENST00000428626 KRT23Q9C075 422 aa18.14■□□□□ 0.49
SEC13-210ENST00000428626 ZNF576Q9H609 170 aa18.14■□□□□ 0.49
SEC13-210ENST00000428626 SENP2Q9HC62 589 aa18.14■□□□□ 0.49
SEC13-210ENST00000428626 POLR3EQ9NVU0 708 aa18.14■□□□□ 0.49
SEC13-210ENST00000428626 SCN5AQ14524 2016 aa18.14■□□□□ 0.49
SEC13-210ENST00000428626 ABCB11O95342 1321 aa18.14■□□□□ 0.49
SEC13-210ENST00000428626 BAZ2BQ9UIF8 2168 aaKnown RBP18.14■□□□□ 0.49
SEC13-210ENST00000428626 SPTBN5Q9NRC6 3674 aaKnown RBP18.13■□□□□ 0.49
SEC13-210ENST00000428626 CHD7Q9P2D1 2997 aa18.13■□□□□ 0.49
SEC13-210ENST00000428626 A6NJR5 290 aa18.13■□□□□ 0.49
SEC13-210ENST00000428626 RBAK-RBAKDNI3L0D1 243 aa18.13■□□□□ 0.49
SEC13-210ENST00000428626 TXNP10599 105 aaKnown RBP18.13■□□□□ 0.49
SEC13-210ENST00000428626 FOSL2P15408 326 aa18.13■□□□□ 0.49
SEC13-210ENST00000428626 CPT1AP50416 773 aa18.13■□□□□ 0.49
SEC13-210ENST00000428626 OTOP2Q7RTS6 562 aa18.13■□□□□ 0.49
SEC13-210ENST00000428626 MTG1Q9BT17 334 aaPredicted RBP18.13■□□□□ 0.49
SEC13-210ENST00000428626 SEZ6LQ9BYH1 1024 aa18.13■□□□□ 0.49
SEC13-210ENST00000428626 KIAA1217Q5T5P2 1943 aa18.13■□□□□ 0.49
SEC13-210ENST00000428626 NKRFO15226 690 aaKnown RBP eCLIP18.12■□□□□ 0.49
SEC13-210ENST00000428626 FGBP02675 491 aa18.12■□□□□ 0.49
SEC13-210ENST00000428626 CYP21A2P08686 494 aa18.12■□□□□ 0.49
SEC13-210ENST00000428626 CHMLP26374 656 aa18.12■□□□□ 0.49
SEC13-210ENST00000428626 IFIT1BQ5T764 474 aaKnown RBP18.12■□□□□ 0.49
SEC13-210ENST00000428626 FBXO11Q86XK2 927 aa18.12■□□□□ 0.49
SEC13-210ENST00000428626 USP38Q8NB14 1042 aa18.12■□□□□ 0.49
SEC13-210ENST00000428626 MTMR8Q96EF0 704 aa18.12■□□□□ 0.49
SEC13-210ENST00000428626 UBAC1Q9BSL1 405 aa18.12■□□□□ 0.49
SEC13-210ENST00000428626 CNNM2Q9H8M5 875 aa18.12■□□□□ 0.49
SEC13-210ENST00000428626 MAD2L2Q9UI95 211 aa18.12■□□□□ 0.49
SEC13-210ENST00000428626 LY6KQ17RY6 165 aa18.11■□□□□ 0.49
SEC13-210ENST00000428626 SEPT14Q6ZU15 432 aa18.11■□□□□ 0.49
SEC13-210ENST00000428626 STOX1Q6ZVD7 989 aa18.11■□□□□ 0.49
SEC13-210ENST00000428626 YBX2Q9Y2T7 364 aaKnown RBP18.11■□□□□ 0.49
SEC13-210ENST00000428626 TET1Q8NFU7 2136 aa18.11■□□□□ 0.49
SEC13-210ENST00000428626 TTC28Q96AY4 2481 aa18.1■□□□□ 0.49
SEC13-210ENST00000428626 RAD50Q92878 1312 aa18.1■□□□□ 0.49
SEC13-210ENST00000428626 PALM3A6NDB9 673 aaPredicted RBP18.1■□□□□ 0.49
SEC13-210ENST00000428626 KLRF2D3W0D1 207 aa18.1■□□□□ 0.49
SEC13-210ENST00000428626 DHX16O60231 1041 aaKnown RBP18.1■□□□□ 0.49
SEC13-210ENST00000428626 EIF2AK2P19525 551 aaKnown RBP18.1■□□□□ 0.49
SEC13-210ENST00000428626 ARHGAP1Q07960 439 aa18.1■□□□□ 0.49
SEC13-210ENST00000428626 TTLL4Q14679 1199 aa18.1■□□□□ 0.49
SEC13-210ENST00000428626 NSUN6Q8TEA1 469 aaKnown RBP18.1■□□□□ 0.49
SEC13-210ENST00000428626 AFG1LQ8WV93 481 aa18.1■□□□□ 0.49
SEC13-210ENST00000428626 CTAGE1Q96RT6 745 aa18.1■□□□□ 0.49
SEC13-210ENST00000428626 RMDN3Q96TC7 470 aa18.1■□□□□ 0.49
SEC13-210ENST00000428626 MAF1Q9H063 256 aa18.1■□□□□ 0.49
SEC13-210ENST00000428626 MRPL11Q9Y3B7 192 aaKnown RBP18.1■□□□□ 0.49
SEC13-210ENST00000428626 HSD17B4P51659 736 aa18.09■□□□□ 0.49
SEC13-210ENST00000428626 RABGGTBP53611 331 aa18.09■□□□□ 0.49
SEC13-210ENST00000428626 GHRHRQ02643 423 aa18.09■□□□□ 0.49
SEC13-210ENST00000428626 FAM47CQ5HY64 1035 aa18.09■□□□□ 0.49
SEC13-210ENST00000428626 KAT2BQ92831 832 aa18.09■□□□□ 0.49
SEC13-210ENST00000428626 MPHOSPH6Q99547 160 aaKnown RBP18.09■□□□□ 0.49
SEC13-210ENST00000428626 PRDM12Q9H4Q4 367 aa18.09■□□□□ 0.49
SEC13-210ENST00000428626 GPHNQ9NQX3 736 aaPredicted RBP18.09■□□□□ 0.49
SEC13-210ENST00000428626 TRIP12Q14669 1992 aaPredicted RBP18.08■□□□□ 0.49
SEC13-210ENST00000428626 SGSM2O43147 1006 aa18.08■□□□□ 0.48
SEC13-210ENST00000428626 CYTH3O43739 400 aa18.08■□□□□ 0.48
SEC13-210ENST00000428626 RGS20O76081 388 aa18.08■□□□□ 0.48
SEC13-210ENST00000428626 CFBP00751 764 aa18.08■□□□□ 0.48
SEC13-210ENST00000428626 MMP3P08254 477 aa18.08■□□□□ 0.48
SEC13-210ENST00000428626 COL9A3Q14050 684 aaPredicted RBP18.08■□□□□ 0.48
SEC13-210ENST00000428626 ADGRE1Q14246 886 aa18.08■□□□□ 0.48
SEC13-210ENST00000428626 NFRKBQ6P4R8 1299 aa18.08■□□□□ 0.48
SEC13-210ENST00000428626 CHST3Q7LGC8 479 aa18.08■□□□□ 0.48
SEC13-210ENST00000428626 MCF2L2Q86YR7 1114 aa18.08■□□□□ 0.48
SEC13-210ENST00000428626 IWS1Q96ST2 819 aa18.08■□□□□ 0.48
SEC13-210ENST00000428626 AMNQ9BXJ7 453 aa18.08■□□□□ 0.48
SEC13-210ENST00000428626 NKX2-4Q9H2Z4 354 aa18.08■□□□□ 0.48
SEC13-210ENST00000428626 PXMP2Q9NR77 195 aa18.08■□□□□ 0.48
SEC13-210ENST00000428626 DDX41Q9UJV9 622 aaKnown RBP18.08■□□□□ 0.48
SEC13-210ENST00000428626 B4DLN1 442 aa18.07■□□□□ 0.48
SEC13-210ENST00000428626 E7EWF7 191 aa18.07■□□□□ 0.48
SEC13-210ENST00000428626 ZBTB5O15062 677 aa18.07■□□□□ 0.48
SEC13-210ENST00000428626 GH1P01241 217 aa18.07■□□□□ 0.48
SEC13-210ENST00000428626 NR3C2P08235 984 aa18.07■□□□□ 0.48
SEC13-210ENST00000428626 SUPT20HL2P0C7V6 817 aa18.07■□□□□ 0.48
SEC13-210ENST00000428626 MYOGP15173 224 aa18.07■□□□□ 0.48
SEC13-210ENST00000428626 MRPL12P52815 198 aaKnown RBP18.07■□□□□ 0.48
SEC13-210ENST00000428626 ANTXR2P58335 489 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms