RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 PTPROQ16827 1216 aa13.73□□□□□ -0.21
DDX39B-209ENST00000428450 TIGD5Q53EQ6 642 aa13.73□□□□□ -0.21
DDX39B-209ENST00000428450 SLFN13Q68D06 897 aa13.73□□□□□ -0.21
DDX39B-209ENST00000428450 LRRC8DQ7L1W4 858 aa13.73□□□□□ -0.21
DDX39B-209ENST00000428450 ERC1Q8IUD2 1116 aa13.73□□□□□ -0.21
DDX39B-209ENST00000428450 RNF135Q8IUD6 432 aa13.73□□□□□ -0.21
DDX39B-209ENST00000428450 STK11IPQ8N1F8 1099 aa13.73□□□□□ -0.21
DDX39B-209ENST00000428450 LRRC47Q8N1G4 583 aaKnown RBP13.73□□□□□ -0.21
DDX39B-209ENST00000428450 SP7Q8TDD2 431 aaPredicted RBP13.73□□□□□ -0.21
DDX39B-209ENST00000428450 PRRX2Q99811 253 aa13.73□□□□□ -0.21
DDX39B-209ENST00000428450 PUS7LQ9H0K6 701 aaKnown RBP13.73□□□□□ -0.21
DDX39B-209ENST00000428450 INSL6Q9Y581 213 aa13.73□□□□□ -0.21
DDX39B-209ENST00000428450 H3BNC9 293 aa13.72□□□□□ -0.21
DDX39B-209ENST00000428450 PARNO95453 639 aaKnown RBP13.72□□□□□ -0.21
DDX39B-209ENST00000428450 ALDH5A1P51649 535 aaPredicted RBP13.72□□□□□ -0.21
DDX39B-209ENST00000428450 SNAP25P60880 206 aa13.72□□□□□ -0.21
DDX39B-209ENST00000428450 HTRA4P83105 476 aaPredicted RBP13.72□□□□□ -0.21
DDX39B-209ENST00000428450 MKRN4PQ13434 485 aaPredicted RBP13.72□□□□□ -0.21
DDX39B-209ENST00000428450 UBE3CQ15386 1083 aa13.72□□□□□ -0.21
DDX39B-209ENST00000428450 EPC2Q52LR7 807 aa13.72□□□□□ -0.21
DDX39B-209ENST00000428450 BRDTQ58F21 947 aaPredicted RBP13.72□□□□□ -0.21
DDX39B-209ENST00000428450 GDF6Q6KF10 455 aaPredicted RBP13.72□□□□□ -0.21
DDX39B-209ENST00000428450 NSMFQ6X4W1 530 aa13.72□□□□□ -0.21
DDX39B-209ENST00000428450 CCDC155Q8N6L0 562 aa13.72□□□□□ -0.21
DDX39B-209ENST00000428450 RHPN1Q8TCX5 695 aa13.72□□□□□ -0.21
DDX39B-209ENST00000428450 CHURC1Q8WUH1 139 aa13.72□□□□□ -0.21
DDX39B-209ENST00000428450 STAG1Q8WVM7 1258 aa13.72□□□□□ -0.21
DDX39B-209ENST00000428450 COPS5Q92905 334 aa13.72□□□□□ -0.21
DDX39B-209ENST00000428450 CRBNQ96SW2 442 aa13.72□□□□□ -0.21
DDX39B-209ENST00000428450 PAG1Q9NWQ8 432 aa13.72□□□□□ -0.21
DDX39B-209ENST00000428450 VPS13AQ96RL7 3174 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 PLA2G6O60733 806 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 EFCAB14O75071 495 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 TTLL1O95922 423 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 CKBP12277 381 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 BAATQ14032 418 aaPredicted RBP13.71□□□□□ -0.21
DDX39B-209ENST00000428450 IKBKEQ14164 716 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 CTC1Q2NKJ3 1217 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 CEP85Q6P2H3 762 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 TRAF7Q6Q0C0 670 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.71□□□□□ -0.21
DDX39B-209ENST00000428450 TRIM67Q6ZTA4 783 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 EP400NLQ6ZTU2 488 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 FAM160B2Q86V87 743 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 SESTD1Q86VW0 696 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 PBXIP1Q96AQ6 731 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 FAM86C1Q9NVL1 165 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 CLDND1Q9NY35 253 aa13.71□□□□□ -0.21
DDX39B-209ENST00000428450 LOC102724159A0A0B4J2E5 919 aa13.7□□□□□ -0.22
DDX39B-209ENST00000428450 TMEM221A6NGB7 291 aa13.7□□□□□ -0.22
DDX39B-209ENST00000428450 GSG1L2A8MUP6 293 aa13.7□□□□□ -0.22
DDX39B-209ENST00000428450 M0R296 226 aa13.7□□□□□ -0.22
DDX39B-209ENST00000428450 NKRFO15226 690 aaKnown RBP eCLIP13.7□□□□□ -0.22
DDX39B-209ENST00000428450 MBTPS2O43462 519 aa13.7□□□□□ -0.22
DDX39B-209ENST00000428450 PRDM1O75626 825 aa13.7□□□□□ -0.22
DDX39B-209ENST00000428450 DLX2Q07687 328 aaPredicted RBP13.7□□□□□ -0.22
DDX39B-209ENST00000428450 MBTPS1Q14703 1052 aa13.7□□□□□ -0.22
DDX39B-209ENST00000428450 PWP2Q15269 919 aaKnown RBP13.7□□□□□ -0.22
DDX39B-209ENST00000428450 PKN1Q16512 942 aa13.7□□□□□ -0.22
DDX39B-209ENST00000428450 GMCL1Q96IK5 515 aa13.7□□□□□ -0.22
DDX39B-209ENST00000428450 STRBPQ96SI9 672 aaKnown RBP13.7□□□□□ -0.22
DDX39B-209ENST00000428450 POP1Q99575 1024 aaKnown RBP13.7□□□□□ -0.22
DDX39B-209ENST00000428450 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.7□□□□□ -0.223e-10■□□□□ 10.7
DDX39B-209ENST00000428450 BOLA2Q9H3K6 86 aa13.7□□□□□ -0.22
DDX39B-209ENST00000428450 NSUN3Q9H649 340 aaKnown RBP13.7□□□□□ -0.22
DDX39B-209ENST00000428450 ADD3Q9UEY8 706 aaKnown RBP13.7□□□□□ -0.22
DDX39B-209ENST00000428450 RAD50Q92878 1312 aa13.69□□□□□ -0.22
DDX39B-209ENST00000428450 MINDY4BA8MYZ0 360 aa13.69□□□□□ -0.22
DDX39B-209ENST00000428450 MCCP23508 829 aa13.69□□□□□ -0.22
DDX39B-209ENST00000428450 SLC1A4P43007 532 aa13.69□□□□□ -0.22
DDX39B-209ENST00000428450 CHMP4BP1P59074 171 aa13.69□□□□□ -0.22
DDX39B-209ENST00000428450 GPM6BQ13491 265 aa13.69□□□□□ -0.22
DDX39B-209ENST00000428450 PPP2R5BQ15173 497 aa13.69□□□□□ -0.22
DDX39B-209ENST00000428450 RPAINQ86UA6 219 aa13.69□□□□□ -0.22
DDX39B-209ENST00000428450 ZNF444Q8N0Y2 327 aaPredicted RBP13.69□□□□□ -0.22
DDX39B-209ENST00000428450 KAT2BQ92831 832 aa13.69□□□□□ -0.22
DDX39B-209ENST00000428450 SAMD11Q96NU1 681 aa13.69□□□□□ -0.22
DDX39B-209ENST00000428450 PRR12Q9ULL5 1215 aa13.69□□□□□ -0.22
DDX39B-209ENST00000428450 FAM186AA6NE01 2351 aa13.68□□□□□ -0.22
DDX39B-209ENST00000428450 NCK2O43639 380 aa13.68□□□□□ -0.22
DDX39B-209ENST00000428450 ARIH2O95376 493 aa13.68□□□□□ -0.22
DDX39B-209ENST00000428450 EDNRBP24530 442 aa13.68□□□□□ -0.22
DDX39B-209ENST00000428450 IKQ13123 557 aaPredicted RBP13.68□□□□□ -0.22
DDX39B-209ENST00000428450 CLUL1Q15846 466 aa13.68□□□□□ -0.22
DDX39B-209ENST00000428450 TRIM71Q2Q1W2 868 aaKnown RBP13.68□□□□□ -0.22
DDX39B-209ENST00000428450 GIMAP6Q6P9H5 292 aa13.68□□□□□ -0.22
DDX39B-209ENST00000428450 CLASRPQ8N2M8 674 aaKnown RBP13.68□□□□□ -0.22
DDX39B-209ENST00000428450 FBXL6Q8N531 539 aa13.68□□□□□ -0.22
DDX39B-209ENST00000428450 NEDD1Q8NHV4 660 aa13.68□□□□□ -0.22
DDX39B-209ENST00000428450 WNT8BQ93098 351 aa13.68□□□□□ -0.22
DDX39B-209ENST00000428450 CHMP4CQ96CF2 233 aa13.68□□□□□ -0.22
DDX39B-209ENST00000428450 CCPG1Q9ULG6 757 aa13.68□□□□□ -0.22
DDX39B-209ENST00000428450 MICAL3Q7RTP6 2002 aa13.68□□□□□ -0.22
DDX39B-209ENST00000428450 NFIBO00712 420 aa13.67□□□□□ -0.22
DDX39B-209ENST00000428450 ICAM1P05362 532 aa13.67□□□□□ -0.22
DDX39B-209ENST00000428450 TXNP10599 105 aaKnown RBP13.67□□□□□ -0.22
DDX39B-209ENST00000428450 ATP5JP18859 108 aa13.67□□□□□ -0.22
DDX39B-209ENST00000428450 ZNF618Q5T7W0 954 aa13.67□□□□□ -0.22
DDX39B-209ENST00000428450 ZKSCAN2Q63HK3 967 aa13.67□□□□□ -0.22
DDX39B-209ENST00000428450 RCSD1Q6JBY9 416 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms