RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 FCHSD1Q86WN1 690 aa17.21■□□□□ 0.35
RTN4-210ENST00000427710 SPC25Q9HBM1 224 aa17.21■□□□□ 0.35
RTN4-210ENST00000427710 LTBP2Q14767 1821 aa17.2■□□□□ 0.34
RTN4-210ENST00000427710 GOLGA8AA7E2F4 631 aa17.2■□□□□ 0.34
RTN4-210ENST00000427710 GOLGA8BA8MQT2 603 aa17.2■□□□□ 0.34
RTN4-210ENST00000427710 ZBTB43O43298 467 aa17.2■□□□□ 0.34
RTN4-210ENST00000427710 ARIH2O95376 493 aa17.2■□□□□ 0.34
RTN4-210ENST00000427710 ASGR1P07306 291 aa17.2■□□□□ 0.34
RTN4-210ENST00000427710 RPS6KB1P23443 525 aa17.2■□□□□ 0.34
RTN4-210ENST00000427710 RTN1Q16799 776 aa17.2■□□□□ 0.34
RTN4-210ENST00000427710 SEPT14Q6ZU15 432 aa17.2■□□□□ 0.34
RTN4-210ENST00000427710 NSUN6Q8TEA1 469 aaKnown RBP17.2■□□□□ 0.34
RTN4-210ENST00000427710 BRF1Q92994 677 aa17.2■□□□□ 0.34
RTN4-210ENST00000427710 LZTS2Q9BRK4 669 aa17.2■□□□□ 0.34
RTN4-210ENST00000427710 TSEN34Q9BSV6 310 aaKnown RBP17.2■□□□□ 0.34
RTN4-210ENST00000427710 AP5M1Q9H0R1 490 aa17.2■□□□□ 0.34
RTN4-210ENST00000427710 PXMP2Q9NR77 195 aa17.2■□□□□ 0.34
RTN4-210ENST00000427710 SEC63Q9UGP8 760 aaKnown RBP17.2■□□□□ 0.34
RTN4-210ENST00000427710 LOC102724159A0A0B4J2E5 919 aa17.19■□□□□ 0.34
RTN4-210ENST00000427710 RBM47A0AV96 593 aaKnown RBP17.19■□□□□ 0.34
RTN4-210ENST00000427710 GCOM1H8Y6P7 765 aaPredicted RBP17.19■□□□□ 0.34
RTN4-210ENST00000427710 HMGB1P09429 215 aaKnown RBP17.19■□□□□ 0.34
RTN4-210ENST00000427710 POLR2MP0CAP2 368 aa17.19■□□□□ 0.34
RTN4-210ENST00000427710 MYCLP12524 364 aaPredicted RBP17.19■□□□□ 0.34
RTN4-210ENST00000427710 CST5P28325 142 aaPredicted RBP17.19■□□□□ 0.34
RTN4-210ENST00000427710 CDC27P30260 824 aa17.19■□□□□ 0.34
RTN4-210ENST00000427710 PWP2Q15269 919 aaKnown RBP17.19■□□□□ 0.34
RTN4-210ENST00000427710 OR6J1Q8NGC5 347 aa17.19■□□□□ 0.34
RTN4-210ENST00000427710 IL31RAQ8NI17 732 aa17.19■□□□□ 0.34
RTN4-210ENST00000427710 GPKOWQ92917 476 aaPredicted RBP eCLIP17.19■□□□□ 0.34
RTN4-210ENST00000427710 VTI1AQ96AJ9 217 aa17.19■□□□□ 0.34
RTN4-210ENST00000427710 MPHOSPH6Q99547 160 aaKnown RBP17.19■□□□□ 0.34
RTN4-210ENST00000427710 STARD7Q9NQZ5 370 aa17.19■□□□□ 0.34
RTN4-210ENST00000427710 FAM217BQ9NTX9 383 aaPredicted RBP17.19■□□□□ 0.34
RTN4-210ENST00000427710 RBM27Q9P2N5 1060 aaKnown RBP17.19■□□□□ 0.34
RTN4-210ENST00000427710 CNTNAP5Q8WYK1 1306 aa17.19■□□□□ 0.34
RTN4-210ENST00000427710 RANBP2P49792 3224 aaKnown RBP17.18■□□□□ 0.34
RTN4-210ENST00000427710 NR3C2P08235 984 aa17.18■□□□□ 0.34
RTN4-210ENST00000427710 SMARCA1P28370 1054 aa17.18■□□□□ 0.34
RTN4-210ENST00000427710 MDM2Q00987 491 aaPredicted RBP17.18■□□□□ 0.34
RTN4-210ENST00000427710 GHRHRQ02643 423 aa17.18■□□□□ 0.34
RTN4-210ENST00000427710 TLE2Q04725 743 aa17.18■□□□□ 0.34
RTN4-210ENST00000427710 SNX17Q15036 470 aa17.18■□□□□ 0.34
RTN4-210ENST00000427710 FSCN1Q16658 493 aaKnown RBP17.18■□□□□ 0.34
RTN4-210ENST00000427710 DUSP28Q4G0W2 176 aa17.18■□□□□ 0.34
RTN4-210ENST00000427710 CXCL17Q6UXB2 119 aa17.18■□□□□ 0.34
RTN4-210ENST00000427710 SH3RF1Q7Z6J0 888 aa17.18■□□□□ 0.34
RTN4-210ENST00000427710 LARP6Q9BRS8 491 aaKnown RBP17.18■□□□□ 0.34
RTN4-210ENST00000427710 PRDM5Q9NQX1 630 aaPredicted RBP17.18■□□□□ 0.34
RTN4-210ENST00000427710 TRIP12Q14669 1992 aaPredicted RBP17.18■□□□□ 0.34
RTN4-210ENST00000427710 MOXD2PA6NHM9 499 aa17.17■□□□□ 0.34
RTN4-210ENST00000427710 B4DLN1 442 aa17.17■□□□□ 0.34
RTN4-210ENST00000427710 PQBP1O60828 265 aaKnown RBP17.17■□□□□ 0.34
RTN4-210ENST00000427710 ADD1P35611 737 aaKnown RBP17.17■□□□□ 0.34
RTN4-210ENST00000427710 MAGEA10P43363 369 aaPredicted RBP17.17■□□□□ 0.34
RTN4-210ENST00000427710 MRPL12P52815 198 aaKnown RBP17.17■□□□□ 0.34
RTN4-210ENST00000427710 PPP2R5BQ15173 497 aa17.17■□□□□ 0.34
RTN4-210ENST00000427710 STXBP2Q15833 593 aa17.17■□□□□ 0.34
RTN4-210ENST00000427710 LY6KQ17RY6 165 aa17.17■□□□□ 0.34
RTN4-210ENST00000427710 HABP4Q5JVS0 413 aaKnown RBP17.17■□□□□ 0.34
RTN4-210ENST00000427710 USP17L6PQ6QN14 398 aa17.17■□□□□ 0.34
RTN4-210ENST00000427710 PCSK9Q8NBP7 692 aaKnown RBP17.17■□□□□ 0.34
RTN4-210ENST00000427710 IWS1Q96ST2 819 aa17.17■□□□□ 0.34
RTN4-210ENST00000427710 PDCD2LQ9BRP1 358 aa17.17■□□□□ 0.34
RTN4-210ENST00000427710 RBM28Q9NW13 759 aaKnown RBP17.17■□□□□ 0.34
RTN4-210ENST00000427710 SCN10AQ9Y5Y9 1956 aa17.17■□□□□ 0.34
RTN4-210ENST00000427710 SORBS3O60504 671 aa17.16■□□□□ 0.34
RTN4-210ENST00000427710 PPFIA3O75145 1194 aa17.16■□□□□ 0.34
RTN4-210ENST00000427710 TXNP10599 105 aaKnown RBP17.16■□□□□ 0.34
RTN4-210ENST00000427710 PSMA5P28066 241 aa17.16■□□□□ 0.34
RTN4-210ENST00000427710 NKX3-2P78367 333 aa17.16■□□□□ 0.34
RTN4-210ENST00000427710 FUT2Q10981 343 aa17.16■□□□□ 0.34
RTN4-210ENST00000427710 TRAF1Q13077 416 aa17.16■□□□□ 0.34
RTN4-210ENST00000427710 PGM5Q15124 567 aa17.16■□□□□ 0.34
RTN4-210ENST00000427710 HEATR3Q7Z4Q2 680 aa17.16■□□□□ 0.34
RTN4-210ENST00000427710 SCFD2Q8WU76 684 aa17.16■□□□□ 0.34
RTN4-210ENST00000427710 PPP1R13LQ8WUF5 828 aa17.16■□□□□ 0.34
RTN4-210ENST00000427710 GLT1D1Q96MS3 346 aa17.16■□□□□ 0.34
RTN4-210ENST00000427710 UPF3BQ9BZI7 483 aaKnown RBP17.16■□□□□ 0.34
RTN4-210ENST00000427710 MAF1Q9H063 256 aa17.16■□□□□ 0.34
RTN4-210ENST00000427710 MYL3P08590 195 aa17.15■□□□□ 0.34
RTN4-210ENST00000427710 METAP2P50579 478 aaKnown RBP eCLIP17.15■□□□□ 0.34
RTN4-210ENST00000427710 PSMC6P62333 389 aa17.15■□□□□ 0.34
RTN4-210ENST00000427710 TTLL4Q14679 1199 aa17.15■□□□□ 0.34
RTN4-210ENST00000427710 UBE2SQ16763 222 aa17.15■□□□□ 0.34
RTN4-210ENST00000427710 WWC2Q6AWC2 1192 aa17.15■□□□□ 0.34
RTN4-210ENST00000427710 CCDC62Q6P9F0 684 aa17.15■□□□□ 0.34
RTN4-210ENST00000427710 RUFY3Q7L099 469 aa17.15■□□□□ 0.34
RTN4-210ENST00000427710 PRO3102Q9H379 93 aa17.15■□□□□ 0.34
RTN4-210ENST00000427710 ZSWIM6Q9HCJ5 1215 aa17.15■□□□□ 0.34
RTN4-210ENST00000427710 PDLIM7Q9NR12 457 aa17.15■□□□□ 0.34
RTN4-210ENST00000427710 Q9Y3F1 56 aa17.15■□□□□ 0.34
RTN4-210ENST00000427710 V9GY48 417 aaPredicted RBP17.15■□□□□ 0.34
RTN4-210ENST00000427710 TRIM43BA6NCK2 446 aa17.14■□□□□ 0.33
RTN4-210ENST00000427710 MEIS2O14770 477 aa17.14■□□□□ 0.33
RTN4-210ENST00000427710 EPB41L2O43491 1005 aaKnown RBP17.14■□□□□ 0.33
RTN4-210ENST00000427710 RGS20O76081 388 aa17.14■□□□□ 0.33
RTN4-210ENST00000427710 SEC24BO95487 1268 aa17.14■□□□□ 0.33
RTN4-210ENST00000427710 CCT2P78371 535 aaKnown RBP17.14■□□□□ 0.33
RTN4-210ENST00000427710 TOB2Q14106 344 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms