RNA–Protein interactions for RNA: ENST00000427658.1

AFG3L1P-208, Transcript of AFG3 like matrix AAA peptidase subunit 1, pseudogene, human

TSL 2

Gene AFG3L1P, Length 2,758 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFG3L1P-208	ENST00000427658	SERTAD1	Q9UHV2	236 aa		11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	MACROD2	A1Z1Q3	448 aa		11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CREB3	O43889	395 aa		11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	NQO1	P15559	274 aa	Known RBP	11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CD44	P16070	742 aa	Known RBP	11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	DDB1	Q16531	1140 aa		11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ELOA2	Q8IYF1	753 aa	Predicted RBP	11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	MREG	Q8N565	214 aa		11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CCDC197	Q8NCU1	140 aa		11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	GPHN	Q9NQX3	736 aa	Predicted RBP	11.55	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	IFIT3	O14879	490 aa	Known RBP	11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	POLR2D	O15514	142 aa	Known RBP	11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	COBL	O75128	1261 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CXCR5	P32302	372 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ODF2	Q5BJF6	829 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	RNF220	Q5VTB9	566 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	C8orf74	Q6P047	294 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	IFT20	Q8IY31	132 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	PSMB7	Q99436	277 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	MAP3K14	Q99558	947 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	VPS16	Q9H269	839 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	EPB41L5	Q9HCM4	733 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TJP1	Q07157	1748 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	PDLIM1	O00151	329 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ORC4	O43929	436 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	PDHA1	P08559	390 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TTC39A	Q5SRH9	613 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TRIML1	Q8N9V2	468 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	DTNBP1	Q96EV8	351 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	PHF24	Q9UPV7	400 aa		11.54	□□□□□ -0.56
AFG3L1P-208	ENST00000427658		A0A0G2JLW4	131 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	SASH1	O94885	1247 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	PAEP	P09466	180 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	MYZAP	P0CAP1	466 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CABP4	P57796	275 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	MRPS35	P82673	323 aa	Known RBP	11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	LBR	Q14739	615 aa	Known RBP	11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	PABPC1L	Q4VXU2	614 aa	Known RBP	11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	OR2W6P	Q8NHA6	318 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	MAIP1	Q8WWC4	291 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	PREB	Q9HCU5	417 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	GDF3	Q9NR23	364 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	RREB1	Q92766	1687 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	VIM	P08670	466 aa	Known RBP	11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	KRT83	P78385	493 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	GUCY2D	Q02846	1103 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	DYNC1I2	Q13409	638 aa	Known RBP	11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	CUL4B	Q13620	913 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	SETDB1	Q15047	1291 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	KRT31	Q15323	416 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TRADD	Q15628	312 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	WDR59	Q6PJI9	974 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ZNF662	Q6ZS27	426 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	APLF	Q8IW19	511 aa	Predicted RBP	11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	MARCH10	Q8NA82	808 aa	Predicted RBP	11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ZWILCH	Q9H900	591 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	RBM12	Q9NTZ6	932 aa	Known RBP	11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	GALNT8	Q9NY28	637 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ADAM22	Q9P0K1	906 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	LRRC42	Q9Y546	428 aa		11.53	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	TTC26	A0AVF1	554 aa		11.52	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	KCNQ3	O43525	872 aa		11.52	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	PPP2R2A	P63151	447 aa		11.52	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	SFSWAP	Q12872	951 aa	Known RBP	11.52	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	FAM98C	Q17RN3	349 aa	Known RBP	11.52	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	BEND3	Q5T5X7	828 aa		11.52	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ZNF790	Q6PG37	636 aa		11.52	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	RAB11FIP4	Q86YS3	637 aa		11.52	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.52	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	RPS6KC1	Q96S38	1066 aa		11.52	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	MAPK8IP1	Q9UQF2	711 aa		11.52	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	ZNF510	Q9Y2H8	683 aa		11.52	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	NDUFB9	Q9Y6M9	179 aa		11.52	□□□□□ -0.56
AFG3L1P-208	ENST00000427658	SYNRG	Q9UMZ2	1314 aa		11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	BTAF1	O14981	1849 aa		11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	LRRC10B	A6NIK2	292 aa		11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	ABLIM1	O14639	778 aa		11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	PCK1	P35558	622 aa		11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	STAT6	P42226	847 aa		11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	GRIN1	Q05586	938 aa		11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	IFI16	Q16666	785 aa	Known RBP	11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	SGSM1	Q2NKQ1	1148 aa		11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	NFRKB	Q6P4R8	1299 aa		11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	TMEM154	Q6P9G4	183 aa		11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	VPS37D	Q86XT2	251 aa		11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	ANKS4B	Q8N8V4	417 aa		11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	CHMP6	Q96FZ7	201 aa		11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	AIFM3	Q96NN9	605 aa		11.52	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	RFC5	P40937	340 aa		11.51	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	ENOX2	Q16206	610 aa	Known RBP	11.51	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	SPATA20	Q8TB22	786 aa		11.51	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	NLRP3	Q96P20	1036 aa		11.51	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	LZTS2	Q9BRK4	669 aa		11.51	□□□□□ -0.57
AFG3L1P-208	ENST00000427658	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.51	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms