RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 RNF181Q9P0P0 153 aa11.96□□□□□ -0.49
CUX1-205ENST00000425244 PSME4Q14997 1843 aa11.96□□□□□ -0.49
CUX1-205ENST00000425244 PALM3A6NDB9 673 aaPredicted RBP11.96□□□□□ -0.49
CUX1-205ENST00000425244 FZD9O00144 591 aa11.96□□□□□ -0.49
CUX1-205ENST00000425244 PARP1P09874 1014 aaKnown RBP11.96□□□□□ -0.49
CUX1-205ENST00000425244 PMS1P54277 932 aaKnown RBP11.96□□□□□ -0.49
CUX1-205ENST00000425244 DHX36Q9H2U1 1008 aaKnown RBP11.96□□□□□ -0.49
CUX1-205ENST00000425244 ABHD10Q9NUJ1 306 aa11.96□□□□□ -0.49
CUX1-205ENST00000425244 M0R2N6 131 aa11.96□□□□□ -0.5
CUX1-205ENST00000425244 PNMA6AP0CW24 399 aaPredicted RBP11.96□□□□□ -0.5
CUX1-205ENST00000425244 KRT9P35527 623 aa11.96□□□□□ -0.5
CUX1-205ENST00000425244 ERVK-24P63145 666 aa11.96□□□□□ -0.5
CUX1-205ENST00000425244 CERKLQ49MI3 558 aaPredicted RBP11.96□□□□□ -0.5
CUX1-205ENST00000425244 NEDD1Q8NHV4 660 aa11.96□□□□□ -0.5
CUX1-205ENST00000425244 SLF1Q9BQI6 1058 aa11.96□□□□□ -0.5
CUX1-205ENST00000425244 SEC63Q9UGP8 760 aaKnown RBP11.96□□□□□ -0.5
CUX1-205ENST00000425244 PUF60Q9UHX1 559 aaKnown RBP11.96□□□□□ -0.5
CUX1-205ENST00000425244 FHOD1Q9Y613 1164 aa11.96□□□□□ -0.5
CUX1-205ENST00000425244 MYH8P13535 1937 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 SMCO2A6NFE2 343 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 PLCG1P19174 1290 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 STIM1Q13586 685 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 KIF4BQ2VIQ3 1234 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 ITIH6Q6UXX5 1313 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 ADSSL1Q8N142 457 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 CCDC51Q96ER9 411 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 UBA5Q9GZZ9 404 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 TCP11L1Q9NUJ3 509 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 LTBP3Q9NS15 1303 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 DDNO94850 711 aaPredicted RBP11.95□□□□□ -0.5
CUX1-205ENST00000425244 GPR162Q16538 588 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 SPDYE2Q495Y8 402 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 PRAMEF18Q5VWM3 479 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 JAKMIP3Q5VZ66 844 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 CABP7Q86V35 215 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 TMTC1Q8IUR5 882 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 LRRC15Q8TF66 581 aa11.95□□□□□ -0.5
CUX1-205ENST00000425244 MAGEC2Q9UBF1 373 aaPredicted RBP11.95□□□□□ -0.5
CUX1-205ENST00000425244 FRMPD2Q68DX3 1309 aaPredicted RBP11.94□□□□□ -0.5
CUX1-205ENST00000425244 H7C1D1 291 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 PSMA7O14818 248 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 ABL1P00519 1130 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 OR52Z1P0C646 297 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 GABPB1Q06547 395 aaPredicted RBP11.94□□□□□ -0.5
CUX1-205ENST00000425244 NONOQ15233 471 aaKnown RBP eCLIP11.94□□□□□ -0.51e-6■■■□□ 18.5
CUX1-205ENST00000425244 GALNT17Q6IS24 598 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 DAGLBQ8NCG7 672 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 GOLGA1Q92805 767 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 RRP36Q96EU6 259 aaKnown RBP11.94□□□□□ -0.5
CUX1-205ENST00000425244 PIGSQ96S52 555 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.94□□□□□ -0.56e-7■■■■■ 48.9
CUX1-205ENST00000425244 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.94□□□□□ -0.5
CUX1-205ENST00000425244 BIN2Q9UBW5 565 aaPredicted RBP11.94□□□□□ -0.5
CUX1-205ENST00000425244 SWAP70Q9UH65 585 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 ARFGEF1Q9Y6D6 1849 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 LRRC10BA6NIK2 292 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 TFRCP02786 760 aaKnown RBP11.94□□□□□ -0.5
CUX1-205ENST00000425244 TECP42680 631 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 ASIC1P78348 528 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 CYP26C1Q6V0L0 522 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 IRF2BP1Q8IU81 584 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 SLC35F6Q8N357 371 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 LZTS2Q9BRK4 669 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 C6orf50Q9HD87 102 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 MTMR4Q9NYA4 1195 aa11.94□□□□□ -0.5
CUX1-205ENST00000425244 USP17L5A8MUK1 530 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 ENTPD3O75355 529 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 RASA3Q14644 834 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 SEPT2Q15019 361 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 KRT25Q7Z3Z0 450 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 CHP1Q99653 195 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 TMEM260Q9NX78 707 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 CTAGE9A4FU28 777 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 KLRC4O43908 158 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 EPS15P42566 896 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 CHMP4BP1P59074 171 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 PDE4DQ08499 809 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 CSGALNACT2Q8N6G5 542 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 GPR161Q8N6U8 529 aaKnown RBP11.93□□□□□ -0.5
CUX1-205ENST00000425244 PARD6BQ9BYG5 372 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 CCSER1Q9C0I3 900 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 ZMYND12Q9H0C1 365 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 EXOC1Q9NV70 894 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 KBTBD4Q9NVX7 518 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 CNTNAP1P78357 1384 aa11.93□□□□□ -0.5
CUX1-205ENST00000425244 TTC26A0AVF1 554 aa11.92□□□□□ -0.5
CUX1-205ENST00000425244 B4DLN1 442 aa11.92□□□□□ -0.5
CUX1-205ENST00000425244 GH2P01242 217 aa11.92□□□□□ -0.5
CUX1-205ENST00000425244 GNA11P29992 359 aa11.92□□□□□ -0.5
CUX1-205ENST00000425244 JAG1P78504 1218 aa11.92□□□□□ -0.5
CUX1-205ENST00000425244 TRIM14Q14142 442 aa11.92□□□□□ -0.5
CUX1-205ENST00000425244 RRP1BQ14684 758 aaKnown RBP11.92□□□□□ -0.5
CUX1-205ENST00000425244 RSRC2Q7L4I2 434 aaKnown RBP11.92□□□□□ -0.5
CUX1-205ENST00000425244 NEK8Q86SG6 692 aa11.92□□□□□ -0.5
CUX1-205ENST00000425244 MB21D1Q8N884 522 aa11.92□□□□□ -0.5
CUX1-205ENST00000425244 TBCKQ8TEA7 893 aa11.92□□□□□ -0.5
CUX1-205ENST00000425244 FAM151AQ8WW52 585 aa11.92□□□□□ -0.5
CUX1-205ENST00000425244 HPS3Q969F9 1004 aa11.92□□□□□ -0.5
CUX1-205ENST00000425244 PCMTD1Q96MG8 357 aaPredicted RBP11.92□□□□□ -0.5
CUX1-205ENST00000425244 SPZ1Q9BXG8 430 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms