RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 STK4Q13043 487 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 AP3B2Q13367 1082 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 BMS1Q14692 1282 aaKnown RBP5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 WHAMMP3Q1A5X7 153 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 MIIPQ5JXC2 388 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 STRIP1Q5VSL9 837 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 STYK1Q6J9G0 422 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 TATDN1Q6P1N9 297 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 SV2BQ7L1I2 683 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 SRGAP1Q7Z6B7 1085 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 CCDC170Q8IYT3 715 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 ADGRF4Q8IZF3 695 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 MSL3Q8N5Y2 521 aaKnown RBP5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 KCTD17Q8N5Z5 321 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 CSGALNACT2Q8N6G5 542 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 CEP112Q8N8E3 955 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 MSANTD4Q8NCY6 345 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 GMCL1P1Q8NEA9 526 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 CRYGNQ8WXF5 182 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 LARP4BQ92615 738 aaKnown RBP5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 RAD54LQ92698 747 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 GOLGA1Q92805 767 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 CNOT6LQ96LI5 555 aaKnown RBP5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 NUP88Q99567 741 aaPredicted RBP5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 TUBGCP2Q9BSJ2 902 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 EDEM3Q9BZQ6 932 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 NT5C3AQ9H0P0 336 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 CPVLQ9H3G5 476 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 HAUS4Q9H6D7 363 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 KANSL2Q9H9L4 492 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 KCNMB3Q9NPA1 279 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 USP40Q9NVE5 1235 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 ZNF446Q9NWS9 450 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 BIN2Q9UBW5 565 aaPredicted RBP5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 LRWD1Q9UFC0 647 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 LUC7L2Q9Y383 392 aaKnown RBP5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 REXO2Q9Y3B8 237 aaKnown RBP5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 EPN1Q9Y6I3 576 aaPredicted RBP5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 V9GYY5 206 aaPredicted RBP5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 MYH10P35580 1976 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 LOC285556D6RIA3 1793 aa5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 FRMPD2Q68DX3 1309 aaPredicted RBP5.41□□□□□ -1.54
CKS1BP6-201ENST00000424932 ARID2Q68CP9 1835 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 ANO9A1A5B4 782 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 FRMD3A2A2Y4 597 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 CTAGE9A4FU28 777 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 CCDC151A5D8V7 595 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 MYMKA6NI61 221 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 EIF3CLB5ME19 914 aaKnown RBP5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 RNF225M0QZC1 329 aaPredicted RBP5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 SOCS7O14512 581 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 TBX3O15119 743 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 ENTPD3O75355 529 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 TRIM37O94972 964 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 TDP2O95551 362 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 PNMA6AP0CW24 399 aaPredicted RBP5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 TECP42680 631 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 MARSP56192 900 aaKnown RBP5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 KRT83P78385 493 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 AMPD2Q01433 879 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 PICALMQ13492 652 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 BRD3Q15059 726 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 MAN2A1Q16706 1144 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 ZCWPW2Q504Y3 356 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 DACT2Q5SW24 774 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 FKBP15Q5T1M5 1219 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 KRT79Q5XKE5 535 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 ANKRD40Q6AI12 368 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 CC2D2BQ6DHV5 1058 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 WDR59Q6PJI9 974 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 TMCO3Q6UWJ1 677 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 LRRC55Q6ZSA7 311 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 TMEM179Q6ZVK1 233 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 CCDC84Q86UT8 332 aaPredicted RBP5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 COL23A1Q86Y22 540 aaPredicted RBP5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 ZC3H3Q8IXZ2 948 aaKnown RBP5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 SLFN12Q8IYM2 578 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 SNX29Q8TEQ0 813 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 HNRNPLLQ8WVV9 542 aaKnown RBP5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 HAS1Q92839 578 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 COA7Q96BR5 231 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 GMCL1Q96IK5 515 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 CDK5RAP3Q96JB5 506 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 PURBQ96QR8 312 aaKnown RBP5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 EIF3CQ99613 913 aaKnown RBP5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 NAPGQ99747 312 aaPredicted RBP5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 UBXN6Q9BZV1 441 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 UBA5Q9GZZ9 404 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 TMX4Q9H1E5 349 aaPredicted RBP5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 SEMA6BQ9H3T3 888 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 DNAJC18Q9H819 358 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 QTRT2Q9H974 415 aaKnown RBP5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 ZNHIT6Q9NWK9 470 aaKnown RBP5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 TMEM260Q9NX78 707 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 PI4KBQ9UBF8 816 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 DDX25Q9UHL0 483 aaKnown RBP5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 SERPINA10Q9UK55 444 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 RAB21Q9UL25 225 aa5.4□□□□□ -1.54
CKS1BP6-201ENST00000424932 MAPK8IP1Q9UQF2 711 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms