RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 KIF2CQ99661 725 aa8.18□□□□□ -1.1
EPHA4-206ENST00000424339 LZTS2Q9BRK4 669 aa8.18□□□□□ -1.1
EPHA4-206ENST00000424339 ZKSCAN3Q9BRR0 538 aa8.18□□□□□ -1.1
EPHA4-206ENST00000424339 UPF3BQ9BZI7 483 aaKnown RBP8.18□□□□□ -1.1
EPHA4-206ENST00000424339 SH2B1Q9NRF2 756 aaPredicted RBP8.18□□□□□ -1.1
EPHA4-206ENST00000424339 FZD1Q9UP38 647 aa8.18□□□□□ -1.1
EPHA4-206ENST00000424339 AGTPBP1Q9UPW5 1226 aa8.18□□□□□ -1.1
EPHA4-206ENST00000424339 NID2Q14112 1375 aa8.18□□□□□ -1.1
EPHA4-206ENST00000424339 A0A1W2PRG0 241 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 FAM155AB1AL88 458 aaPredicted RBP8.17□□□□□ -1.1
EPHA4-206ENST00000424339 ZBTB43O43298 467 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 NMT2O60551 498 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 NDUFB10O96000 172 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 SNHG28P0DPA3 235 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 PDHBP11177 359 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 SMARCA1P28370 1054 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 HOXA7P31268 230 aaPredicted RBP8.17□□□□□ -1.1
EPHA4-206ENST00000424339 SLC1A4P43007 532 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 HMGCS2P54868 508 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 TRAF1Q13077 416 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 AMHR2Q16671 573 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 SLFN13Q68D06 897 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 APOA5Q6Q788 366 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 Q6ZUG5 572 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 LYSMD3Q7Z3D4 306 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 ANKRD23Q86SG2 305 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 FAM160B2Q86V87 743 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 ZNF654Q8IZM8 581 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 ACER1Q8TDN7 264 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 CHURC1Q8WUH1 139 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 BRF1Q92994 677 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 ZSCAN31Q96LW9 406 aaPredicted RBP8.17□□□□□ -1.1
EPHA4-206ENST00000424339 ZMYND15Q9H091 742 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 RBM28Q9NW13 759 aaKnown RBP8.17□□□□□ -1.1
EPHA4-206ENST00000424339 THSD7BQ9C0I4 1608 aa8.17□□□□□ -1.1
EPHA4-206ENST00000424339 CCL15-CCL14A0A0B4J2E2 113 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 KLF18A0A0U1RQI7 1052 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 USP17L15C9J2P7 530 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 USP17L13C9JLJ4 530 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 USP17L11C9JVI0 530 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 USP17L18D6R9N7 530 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 USP17L22D6RA61 530 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 USP17L17D6RBQ6 530 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 USP17L19D6RCP7 530 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 USP17L20D6RJB6 530 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 PARP1P09874 1014 aaKnown RBP8.16□□□□□ -1.1
EPHA4-206ENST00000424339 FURINP09958 794 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 BMP3P12645 472 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 VCAM1P19320 739 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 TM4SF4P48230 202 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 STAT2P52630 851 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 ZNF543Q08ER8 600 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 USP17L24Q0WX57 530 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 TROAPQ12815 778 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 TOB2Q14106 344 aaPredicted RBP8.16□□□□□ -1.1
EPHA4-206ENST00000424339 CCL15Q16663 113 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 SHROOM1Q2M3G4 852 aaPredicted RBP8.16□□□□□ -1.1
EPHA4-206ENST00000424339 CPLX2Q6PUV4 134 aaKnown RBP8.16□□□□□ -1.1
EPHA4-206ENST00000424339 CHST3Q7LGC8 479 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 LRRC47Q8N1G4 583 aaKnown RBP8.16□□□□□ -1.1
EPHA4-206ENST00000424339 MB21D1Q8N884 522 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 PARK7Q99497 189 aaKnown RBP8.16□□□□□ -1.1
EPHA4-206ENST00000424339 ARHGAP9Q9BRR9 750 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 WDR33Q9C0J8 1336 aaKnown RBP8.16□□□□□ -1.1
EPHA4-206ENST00000424339 HOXC10Q9NYD6 342 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 FEM1BQ9UK73 627 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 LIMCH1Q9UPQ0 1083 aa8.16□□□□□ -1.1
EPHA4-206ENST00000424339 GOLGA8BA8MQT2 603 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 CA12O43570 354 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 CDKL5O76039 1030 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 GCLCP48506 637 aaPredicted RBP8.15□□□□□ -1.1
EPHA4-206ENST00000424339 METAP2P50579 478 aaKnown RBP eCLIP8.15□□□□□ -1.1
EPHA4-206ENST00000424339 AK2P54819 239 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 IRX3P78415 501 aaPredicted RBP8.15□□□□□ -1.1
EPHA4-206ENST00000424339 COG2Q14746 738 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 GRM4Q14833 912 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 RTN1Q16799 776 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 CCDC96Q2M329 555 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 CYP4F22Q6NT55 531 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 BTNL9Q6UXG8 535 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 LBX2Q6XYB7 198 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 GADL1Q6ZQY3 521 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 ZBTB33Q86T24 672 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 MICU3Q86XE3 530 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 CLEC10AQ8IUN9 316 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 TEX2Q8IWB9 1127 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 PRPF38AQ8NAV1 312 aaKnown RBP8.15□□□□□ -1.1
EPHA4-206ENST00000424339 FANCBQ8NB91 859 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 LRRC2Q9BYS8 371 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 TANGO6Q9C0B7 1094 aa8.15□□□□□ -1.1
EPHA4-206ENST00000424339 RPAP3Q9H6T3 665 aaPredicted RBP8.15□□□□□ -1.1
EPHA4-206ENST00000424339 PALM3A6NDB9 673 aaPredicted RBP8.14□□□□□ -1.11
EPHA4-206ENST00000424339 GOLGA8AA7E2F4 631 aa8.14□□□□□ -1.11
EPHA4-206ENST00000424339 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.14□□□□□ -1.11
EPHA4-206ENST00000424339 GPR25O00155 361 aa8.14□□□□□ -1.11
EPHA4-206ENST00000424339 CPLX1O14810 134 aa8.14□□□□□ -1.11
EPHA4-206ENST00000424339 RAD21O60216 631 aa8.14□□□□□ -1.11
EPHA4-206ENST00000424339 FLOT1O75955 427 aa8.14□□□□□ -1.11
EPHA4-206ENST00000424339 CPA1P15085 419 aa8.14□□□□□ -1.11
EPHA4-206ENST00000424339 PDIA3P30101 505 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms