RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 VWCEQ96DN2 955 aa13.26□□□□□ -0.29
NDUFA3-208ENST00000422029 SENP2Q9HC62 589 aa13.26□□□□□ -0.29
NDUFA3-208ENST00000422029 YBX2Q9Y2T7 364 aaKnown RBP13.26□□□□□ -0.29
NDUFA3-208ENST00000422029 TAF6LQ9Y6J9 622 aa13.26□□□□□ -0.29
NDUFA3-208ENST00000422029 RBM47A0AV96 593 aaKnown RBP13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 CFBP00751 764 aa13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 PARP1P09874 1014 aaKnown RBP13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 GSPT1P15170 499 aaKnown RBP13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 PTH1RQ03431 593 aa13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 TTLL4Q14679 1199 aa13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 GPATCH4Q5T3I0 446 aaKnown RBP13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 RASIP1Q5U651 963 aa13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 PSRC1Q6PGN9 363 aaPredicted RBP13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 SYTL5Q8TDW5 730 aaPredicted RBP13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 AFG1LQ8WV93 481 aa13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 UBAC1Q9BSL1 405 aa13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 MTG1Q9BT17 334 aaPredicted RBP13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 JMJD4Q9H9V9 463 aa13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 CERS4Q9HA82 394 aa13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 Q9Y3F1 56 aa13.25□□□□□ -0.29
NDUFA3-208ENST00000422029 WDR19Q8NEZ3 1342 aa13.24□□□□□ -0.29
NDUFA3-208ENST00000422029 MYCLP12524 364 aaPredicted RBP13.24□□□□□ -0.29
NDUFA3-208ENST00000422029 HOXA13P31271 388 aaPredicted RBP13.24□□□□□ -0.29
NDUFA3-208ENST00000422029 CPT1AP50416 773 aa13.24□□□□□ -0.29
NDUFA3-208ENST00000422029 FBXO11Q86XK2 927 aa13.24□□□□□ -0.29
NDUFA3-208ENST00000422029 HOMER1Q86YM7 354 aa13.24□□□□□ -0.29
NDUFA3-208ENST00000422029 SCFD2Q8WU76 684 aa13.24□□□□□ -0.29
NDUFA3-208ENST00000422029 HERVK_113Q902F9 699 aa13.24□□□□□ -0.29
NDUFA3-208ENST00000422029 DSCC1Q9BVC3 393 aa13.24□□□□□ -0.29
NDUFA3-208ENST00000422029 POLR3EQ9NVU0 708 aa13.24□□□□□ -0.29
NDUFA3-208ENST00000422029 CTNNA3Q9UI47 895 aa13.24□□□□□ -0.29
NDUFA3-208ENST00000422029 MSRAQ9UJ68 235 aa13.24□□□□□ -0.29
NDUFA3-208ENST00000422029 ABCB11O95342 1321 aa13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 KLRF2D3W0D1 207 aa13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 RFXAPO00287 272 aa13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 HIP1O00291 1037 aa13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 PPP1R11O60927 126 aaPredicted RBP13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 PCP11498 1178 aaKnown RBP13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 EDNRBP24530 442 aa13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 ADGRE1Q14246 886 aa13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 SLC35G1Q2M3R5 365 aa13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 IFIT1BQ5T764 474 aaKnown RBP13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 TTC22Q5TAA0 569 aa13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 ARHGEF16Q5VV41 709 aa13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 TMCO2Q7Z6W1 182 aaPredicted RBP13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 MICALL1Q8N3F8 863 aa13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 ANKS1AQ92625 1134 aa13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 RMDN3Q96TC7 470 aa13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 ALG1Q9BT22 464 aa13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 FTOQ9C0B1 505 aaKnown RBP eCLIP13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 SLC4A7Q9Y6M7 1214 aa13.23□□□□□ -0.29
NDUFA3-208ENST00000422029 SCN5AQ14524 2016 aa13.22□□□□□ -0.29
NDUFA3-208ENST00000422029 OPLAHO14841 1288 aa13.22□□□□□ -0.29
NDUFA3-208ENST00000422029 AAMPQ13685 434 aa13.22□□□□□ -0.29
NDUFA3-208ENST00000422029 ASPRV1Q53RT3 343 aa13.22□□□□□ -0.29
NDUFA3-208ENST00000422029 DNERQ8NFT8 737 aa13.22□□□□□ -0.29
NDUFA3-208ENST00000422029 KRT23Q9C075 422 aa13.22□□□□□ -0.29
NDUFA3-208ENST00000422029 NOD1Q9Y239 953 aa13.22□□□□□ -0.29
NDUFA3-208ENST00000422029 A6NJR5 290 aa13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 MMP3P08254 477 aa13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 ZNF286BP0CG31 522 aa13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 ZNF200P98182 395 aaPredicted RBP13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 ARHGAP1Q07960 439 aa13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 SEC23AQ15436 765 aa13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 CCDC178Q5BJE1 867 aa13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 GDF6Q6KF10 455 aaPredicted RBP13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 CCDC62Q6P9F0 684 aa13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 STOX1Q6ZVD7 989 aa13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 FCHSD1Q86WN1 690 aa13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 SKAP1Q86WV1 359 aa13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 TICAM2Q86XR7 235 aa13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 IL31RAQ8NI17 732 aa13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 NSUN6Q8TEA1 469 aaKnown RBP13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 GPKOWQ92917 476 aaPredicted RBP eCLIP13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 PIGSQ96S52 555 aa13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 GAS2L1Q99501 681 aaPredicted RBP13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 MPHOSPH6Q99547 160 aaKnown RBP13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 SLC28A3Q9HAS3 691 aa13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 MAD2L2Q9UI95 211 aa13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 MRPL11Q9Y3B7 192 aaKnown RBP13.21□□□□□ -0.29
NDUFA3-208ENST00000422029 LAMA2P24043 3122 aaKnown RBP13.21□□□□□ -0.3
NDUFA3-208ENST00000422029 GBF1Q92538 1859 aa13.21□□□□□ -0.3
NDUFA3-208ENST00000422029 LAMA4Q16363 1823 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 RAD50Q92878 1312 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 TMEM265A0A087WTH1 108 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 B4DLN1 442 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 IFIT3O14879 490 aaKnown RBP13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 GH1P01241 217 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 NR3C2P08235 984 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 IQCF3P0C7M6 154 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 SUPT20HL2P0C7V6 817 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 ATP2A2P16615 1042 aaKnown RBP13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 CHMLP26374 656 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 MRPL12P52815 198 aaKnown RBP13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 COL9A3Q14050 684 aaPredicted RBP13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 STXBP2Q15833 593 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 PTGISQ16647 500 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 BRDTQ58F21 947 aaPredicted RBP13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 SPRED2Q7Z698 418 aa13.2□□□□□ -0.3
NDUFA3-208ENST00000422029 MCF2L2Q86YR7 1114 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms