RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 PFKFB1P16118 471 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 SLC16A2P36021 539 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 SYKP43405 635 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 TTBK2Q6IQ55 1244 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 TADA2BQ86TJ2 420 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 TC2NQ8N9U0 490 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 CCDC51Q96ER9 411 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 SYT17Q9BSW7 474 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 HACL1Q9UJ83 578 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 PCDHA4Q9UN74 947 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 PCDHB6Q9Y5E3 794 aa16.54■□□□□ 0.24
SEMA4D-204ENST00000420101 FAM205CA6NFA0 338 aa16.53■□□□□ 0.24
SEMA4D-204ENST00000420101 TRIM75PA6NK02 468 aa16.53■□□□□ 0.24
SEMA4D-204ENST00000420101 STXBP3O00186 592 aa16.53■□□□□ 0.24
SEMA4D-204ENST00000420101 ATP1A3P13637 1013 aa16.53■□□□□ 0.24
SEMA4D-204ENST00000420101 TOB1P50616 345 aaPredicted RBP16.53■□□□□ 0.24
SEMA4D-204ENST00000420101 RRP1BQ14684 758 aaKnown RBP16.53■□□□□ 0.24
SEMA4D-204ENST00000420101 CASP8Q14790 479 aa16.53■□□□□ 0.24
SEMA4D-204ENST00000420101 TRIML1Q8N9V2 468 aa16.53■□□□□ 0.24
SEMA4D-204ENST00000420101 DCAF4Q8WV16 495 aa16.53■□□□□ 0.24
SEMA4D-204ENST00000420101 MKL1Q969V6 931 aa16.53■□□□□ 0.24
SEMA4D-204ENST00000420101 RIOX1Q9H6W3 641 aa16.53■□□□□ 0.24
SEMA4D-204ENST00000420101 SIPA1L1O43166 1804 aa16.53■□□□□ 0.24
SEMA4D-204ENST00000420101 CCDC194A0A1B0GVG4 234 aa16.52■□□□□ 0.24
SEMA4D-204ENST00000420101 KIF1CO43896 1103 aaKnown RBP16.52■□□□□ 0.24
SEMA4D-204ENST00000420101 JAG1P78504 1218 aa16.52■□□□□ 0.24
SEMA4D-204ENST00000420101 MCM6Q14566 821 aa16.52■□□□□ 0.24
SEMA4D-204ENST00000420101 EARS2Q5JPH6 523 aaKnown RBP16.52■□□□□ 0.24
SEMA4D-204ENST00000420101 LRRC31Q6UY01 552 aa16.52■□□□□ 0.24
SEMA4D-204ENST00000420101 ADGRF4Q8IZF3 695 aa16.52■□□□□ 0.24
SEMA4D-204ENST00000420101 C6orf50Q9HD87 102 aa16.52■□□□□ 0.24
SEMA4D-204ENST00000420101 FAN1Q9Y2M0 1017 aa16.52■□□□□ 0.24
SEMA4D-204ENST00000420101 SMCO2A6NFE2 343 aa16.52■□□□□ 0.23
SEMA4D-204ENST00000420101 F5H6K3 240 aa16.52■□□□□ 0.23
SEMA4D-204ENST00000420101 TBC1D12O60347 775 aa16.52■□□□□ 0.23
SEMA4D-204ENST00000420101 KLRC3Q07444 240 aa16.52■□□□□ 0.23
SEMA4D-204ENST00000420101 PTPAQ15257 358 aa16.52■□□□□ 0.23
SEMA4D-204ENST00000420101 GALNT17Q6IS24 598 aa16.52■□□□□ 0.23
SEMA4D-204ENST00000420101 MLKLQ8NB16 471 aa16.52■□□□□ 0.23
SEMA4D-204ENST00000420101 ENOX1Q8TC92 643 aaKnown RBP16.52■□□□□ 0.23
SEMA4D-204ENST00000420101 RNF181Q9P0P0 153 aa16.52■□□□□ 0.23
SEMA4D-204ENST00000420101 ZBTB21Q9ULJ3 1066 aa16.52■□□□□ 0.23
SEMA4D-204ENST00000420101 ARFGEF1Q9Y6D6 1849 aa16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 ASTN2O75129 1339 aaPredicted RBP16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 ATXN2Q99700 1313 aaKnown RBP16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 A0A087WWV3 80 aa16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 CTAGE9A4FU28 777 aa16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 GNA11P29992 359 aa16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 GYS2P54840 703 aa16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 ZNF174Q15697 407 aa16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 NPY5RQ15761 445 aa16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 TTC38Q5R3I4 469 aa16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 TYW1BQ6NUM6 668 aa16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 GPC2Q8N158 579 aa16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 KRI1Q8N9T8 703 aaKnown RBP16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 CNNM3Q8NE01 707 aa16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 RASGRP4Q8TDF6 673 aa16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 AFAP1L1Q8TED9 768 aa16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 RPGRIP1Q96KN7 1286 aa16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 BAZ2BQ9UIF8 2168 aaKnown RBP16.51■□□□□ 0.23
SEMA4D-204ENST00000420101 GOLGB1Q14789 3259 aaKnown RBP16.5■□□□□ 0.23
SEMA4D-204ENST00000420101 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.5■□□□□ 0.23
SEMA4D-204ENST00000420101 CTAGE15A4D2H0 777 aa16.5■□□□□ 0.23
SEMA4D-204ENST00000420101 USP17L10C9JJH3 530 aa16.5■□□□□ 0.23
SEMA4D-204ENST00000420101 CTAGE8P0CG41 777 aa16.5■□□□□ 0.23
SEMA4D-204ENST00000420101 CTAGE6Q86UF2 777 aa16.5■□□□□ 0.23
SEMA4D-204ENST00000420101 POTEDQ86YR6 584 aa16.5■□□□□ 0.23
SEMA4D-204ENST00000420101 SIAH1Q8IUQ4 282 aa16.5■□□□□ 0.23
SEMA4D-204ENST00000420101 CTAGE4Q8IX94 777 aa16.5■□□□□ 0.23
SEMA4D-204ENST00000420101 COA7Q96BR5 231 aa16.5■□□□□ 0.23
SEMA4D-204ENST00000420101 CLIC6Q96NY7 704 aa16.5■□□□□ 0.23
SEMA4D-204ENST00000420101 EPC1Q9H2F5 836 aa16.5■□□□□ 0.23
SEMA4D-204ENST00000420101 JMJD4Q9H9V9 463 aa16.5■□□□□ 0.23
SEMA4D-204ENST00000420101 ABCB6Q9NP58 842 aa16.5■□□□□ 0.23
SEMA4D-204ENST00000420101 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.5■□□□□ 0.23
SEMA4D-204ENST00000420101 PNMA6FA0A0J9YX94 578 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 AKR1B15C9JRZ8 316 aaPredicted RBP16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 hCG_1984214I3L0E3 225 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 BIN1O00499 593 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 NDUFB10O96000 172 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 ZNF18P17022 549 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 CAP2P40123 477 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 ZYXQ15942 572 aaKnown RBP16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 ANGEL2Q5VTE6 544 aaKnown RBP16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 SPICE1Q8N0Z3 855 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 ZNF713Q8N859 430 aaPredicted RBP16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 GMCL1P1Q8NEA9 526 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 TNFRSF25Q93038 417 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 NUP88Q99567 741 aaPredicted RBP16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 DEFB129Q9H1M3 183 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 GOPCQ9HD26 462 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 GPRC5DQ9NZD1 345 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 TMEM232C9JQI7 657 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 SHOX2O60902 331 aaPredicted RBP16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 BMP15O95972 392 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 BMP3P12645 472 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 ECE1P42892 770 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 TOGARAM2Q6ZUX3 1019 aa16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 SPATS2Q86XZ4 545 aaKnown RBP16.49■□□□□ 0.23
SEMA4D-204ENST00000420101 FAM177A1Q8N128 213 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms