RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 FAM221AA4D161 298 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 ITGB5P18084 799 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 VAMP1P23763 118 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 EPHX2P34913 555 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 FANCCQ00597 558 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 PDE4BQ07343 736 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 DDR1Q08345 913 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 FAM50AQ14320 339 aaKnown RBP7.25□□□□□ -1.25
CSTF1-202ENST00000415828 NKG7Q16617 165 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 AOC3Q16853 763 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 ZNF792Q3KQV3 632 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 SAPCD2Q86UD0 394 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 USP48Q86UV5 1035 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 HID1Q8IV36 788 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 FBXO27Q8NI29 283 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 ZNF296Q8WUU4 475 aaPredicted RBP7.25□□□□□ -1.25
CSTF1-202ENST00000415828 ZNF428Q96B54 188 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 KIAA1522Q9P206 1035 aaPredicted RBP7.25□□□□□ -1.25
CSTF1-202ENST00000415828 SUPT16HQ9Y5B9 1047 aaKnown RBP7.25□□□□□ -1.25
CSTF1-202ENST00000415828 CORINQ9Y5Q5 1042 aa7.25□□□□□ -1.25
CSTF1-202ENST00000415828 ANKRD26Q9UPS8 1709 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 CACNA1GO43497 2377 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 SCAMP3O14828 347 aaKnown RBP7.24□□□□□ -1.25
CSTF1-202ENST00000415828 JUNBP17275 347 aaPredicted RBP7.24□□□□□ -1.25
CSTF1-202ENST00000415828 FUT4P22083 530 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 GARTP22102 1010 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 ITPK1Q13572 414 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 ZNF394Q53GI3 561 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 Q7L0L9 218 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 FAM214BQ7L5A3 538 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 SYNE4Q8N205 404 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 NLGN1Q8N2Q7 840 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 XAGE3Q8WTP9 111 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 ASIC4Q96FT7 647 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 HRASLS5Q96KN8 279 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 FOXQ1Q9C009 403 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 METTL5Q9NRN9 209 aaKnown RBP7.24□□□□□ -1.25
CSTF1-202ENST00000415828 RNF186Q9NXI6 227 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 PCDHGB7Q9Y5F8 929 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 RNF123Q5XPI4 1314 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 ZNF541Q9H0D2 1346 aa7.24□□□□□ -1.25
CSTF1-202ENST00000415828 CDH23Q9H251 3354 aa7.23□□□□□ -1.25
CSTF1-202ENST00000415828 BCORQ6W2J9 1755 aa7.23□□□□□ -1.25
CSTF1-202ENST00000415828 TMEM265A0A087WTH1 108 aa7.23□□□□□ -1.25
CSTF1-202ENST00000415828 LRIG2O94898 1065 aa7.23□□□□□ -1.25
CSTF1-202ENST00000415828 PLCG1P19174 1290 aa7.23□□□□□ -1.25
CSTF1-202ENST00000415828 EN2P19622 333 aaPredicted RBP7.23□□□□□ -1.25
CSTF1-202ENST00000415828 RBM25P49756 843 aaKnown RBP7.23□□□□□ -1.25
CSTF1-202ENST00000415828 MPP2Q14168 576 aa7.23□□□□□ -1.25
CSTF1-202ENST00000415828 SLBPQ14493 270 aaKnown RBP eCLIP7.23□□□□□ -1.25
CSTF1-202ENST00000415828 MIPEPQ99797 713 aa7.23□□□□□ -1.25
CSTF1-202ENST00000415828 DPH2Q9BQC3 489 aaPredicted RBP7.23□□□□□ -1.25
CSTF1-202ENST00000415828 CDK19Q9BWU1 502 aa7.23□□□□□ -1.25
CSTF1-202ENST00000415828 ADAMTS1Q9UHI8 967 aa7.23□□□□□ -1.25
CSTF1-202ENST00000415828 GTF2IRD1Q9UHL9 959 aa7.23□□□□□ -1.25
CSTF1-202ENST00000415828 HACL1Q9UJ83 578 aa7.23□□□□□ -1.25
CSTF1-202ENST00000415828 TACC3Q9Y6A5 838 aa7.23□□□□□ -1.25
CSTF1-202ENST00000415828 NCOR1O75376 2440 aa7.22□□□□□ -1.25
CSTF1-202ENST00000415828 PAPLNO95428 1278 aa7.22□□□□□ -1.25
CSTF1-202ENST00000415828 CWF19L2Q2TBE0 894 aaKnown RBP7.22□□□□□ -1.25
CSTF1-202ENST00000415828 PRAMEF13Q5VWM6 474 aa7.22□□□□□ -1.25
CSTF1-202ENST00000415828 SPON2Q9BUD6 331 aa7.22□□□□□ -1.25
CSTF1-202ENST00000415828 TNKS2Q9H2K2 1166 aa7.22□□□□□ -1.25
CSTF1-202ENST00000415828 TJP2Q9UDY2 1190 aa7.22□□□□□ -1.25
CSTF1-202ENST00000415828 BAHCC1Q9P281 2608 aa7.22□□□□□ -1.25
CSTF1-202ENST00000415828 RNASE1P07998 156 aaKnown RBP7.21□□□□□ -1.26
CSTF1-202ENST00000415828 REC114Q7Z4M0 266 aa7.21□□□□□ -1.26
CSTF1-202ENST00000415828 KIAA0825Q8IV33 1275 aa7.21□□□□□ -1.26
CSTF1-202ENST00000415828 PI4K2BQ8TCG2 481 aa7.21□□□□□ -1.26
CSTF1-202ENST00000415828 TMEM87BQ96K49 555 aa7.21□□□□□ -1.26
CSTF1-202ENST00000415828 PRO3102Q9H379 93 aa7.21□□□□□ -1.26
CSTF1-202ENST00000415828 RC3H2Q9HBD1 1191 aaKnown RBP7.21□□□□□ -1.26
CSTF1-202ENST00000415828 MBNL3Q9NUK0 354 aaKnown RBP7.21□□□□□ -1.26
CSTF1-202ENST00000415828 SAGE1Q9NXZ1 904 aa7.21□□□□□ -1.26
CSTF1-202ENST00000415828 UBP1Q9NZI7 540 aa7.21□□□□□ -1.26
CSTF1-202ENST00000415828 KLHL3Q9UH77 587 aa7.21□□□□□ -1.26
CSTF1-202ENST00000415828 ADAMTS6Q9UKP5 1117 aa7.21□□□□□ -1.26
CSTF1-202ENST00000415828 TPX2Q9ULW0 747 aaKnown RBP7.21□□□□□ -1.26
CSTF1-202ENST00000415828 POLR3KQ9Y2Y1 108 aaPredicted RBP7.21□□□□□ -1.26
CSTF1-202ENST00000415828 WDFY4Q6ZS81 3184 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 IGF2BP3O00425 579 aaKnown RBP eCLIP7.2□□□□□ -1.26
CSTF1-202ENST00000415828 SLITRK5O94991 958 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 EOMESO95936 686 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 CST3P01034 146 aaPredicted RBP7.2□□□□□ -1.26
CSTF1-202ENST00000415828 MCM4P33991 863 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 APOBRQ0VD83 1088 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 SEZ6Q53EL9 994 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 LCE1DQ5T752 114 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 OGFOD2Q6N063 350 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 TTLL6Q8N841 843 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 MFSD2AQ8NA29 543 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 FAM13CQ8NE31 585 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 ACSF2Q96CM8 615 aaPredicted RBP7.2□□□□□ -1.26
CSTF1-202ENST00000415828 BRMS1Q9HCU9 246 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 STXBP5LQ9Y2K9 1186 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 SNX11Q9Y5W9 270 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 INSRP06213 1382 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 ROCK1Q13464 1354 aa7.2□□□□□ -1.26
CSTF1-202ENST00000415828 ALPK3Q96L96 1907 aa7.19□□□□□ -1.26
CSTF1-202ENST00000415828 PKD1L2Q7Z442 2459 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms