RNA–Protein interactions for RNA: ENST00000415807.6

FNDC3B-202, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 5,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-202ENST00000415807 PODXL2Q9NZ53 605 aa12.99□□□□□ -0.33
FNDC3B-202ENST00000415807 ARHGEF35A5YM69 484 aa12.99□□□□□ -0.33
FNDC3B-202ENST00000415807 CD44P16070 742 aaKnown RBP12.99□□□□□ -0.33
FNDC3B-202ENST00000415807 EIF2AK2P19525 551 aaKnown RBP12.99□□□□□ -0.33
FNDC3B-202ENST00000415807 MTF1Q14872 753 aa12.99□□□□□ -0.33
FNDC3B-202ENST00000415807 LRCH2Q5VUJ6 765 aa12.99□□□□□ -0.33
FNDC3B-202ENST00000415807 TMCO3Q6UWJ1 677 aa12.99□□□□□ -0.33
FNDC3B-202ENST00000415807 ACRBPQ8NEB7 543 aa12.99□□□□□ -0.33
FNDC3B-202ENST00000415807 GLT8D2Q9H1C3 349 aa12.99□□□□□ -0.33
FNDC3B-202ENST00000415807 CCDC169A6NNP5 214 aa12.99□□□□□ -0.33
FNDC3B-202ENST00000415807 SLC37A4O43826 429 aa12.99□□□□□ -0.33
FNDC3B-202ENST00000415807 CDC25BP30305 580 aa12.99□□□□□ -0.33
FNDC3B-202ENST00000415807 RNASE9P60153 205 aaKnown RBP12.99□□□□□ -0.33
FNDC3B-202ENST00000415807 ARHGAP4P98171 946 aa12.99□□□□□ -0.33
FNDC3B-202ENST00000415807 RASA3Q14644 834 aa12.99□□□□□ -0.33
FNDC3B-202ENST00000415807 GOLGA6L9A6NEM1 432 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 SHMT1P34896 483 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 ERCC6LQ2NKX8 1250 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 MTERF4Q7Z6M4 381 aaKnown RBP12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 PAGR1Q9BTK6 254 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 BHMT2Q9H2M3 363 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 ATRNO75882 1429 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 LAD1O00515 517 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 TNFAIP1Q13829 316 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 HS2ST1Q7LGA3 356 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 P2RX5Q93086 422 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 ZMYND12Q9H0C1 365 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 NT5C3AQ9H0P0 336 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 LUC7LQ9NQ29 371 aaKnown RBP12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 NUP98P52948 1817 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 NPHP3-ACAD11A0A0J9YXS1 232 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 PLSCR1O15162 318 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 CETN3O15182 167 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 CLIC2O15247 247 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 POLR3GO15318 223 aaPredicted RBP12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 SPP2Q13103 211 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 GRM1Q13255 1194 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 NBPF9Q3BBW0 867 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 AK8Q96MA6 479 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 TAF1P21675 1872 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 HARSP12081 509 aaKnown RBP12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 CYP2J2P51589 502 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 HOOK2Q96ED9 719 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 FZD1Q9UP38 647 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 SUGT1Q9Y2Z0 365 aa12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 MYH14Q7Z406 1995 aaKnown RBP12.98□□□□□ -0.33
FNDC3B-202ENST00000415807 TMCO5BA8MYB1 307 aa12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 KIF5AQ12840 1032 aa12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 STK4Q13043 487 aa12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 GOLGA6L1Q8N7Z2 621 aa12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 RAVER2Q9HCJ3 691 aaKnown RBP12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 ZNF70Q9UC06 446 aaPredicted RBP12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 MYCNP04198 464 aaPredicted RBP12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 EAPPQ56P03 285 aaPredicted RBP12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 CTAGE9A4FU28 777 aa12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 PLA2G4BP0C869 781 aa12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 ETF1P62495 437 aaKnown RBP12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 FUT2Q10981 343 aa12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 DPYDQ12882 1025 aa12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 PLEKHA4Q9H4M7 779 aa12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 MRPL11Q9Y3B7 192 aaKnown RBP12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 LRP6O75581 1613 aa12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 RSBN1LQ6PCB5 846 aaPredicted RBP12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 CYP26C1Q6V0L0 522 aa12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 TOGARAM2Q6ZUX3 1019 aa12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 OR8K1Q8NGG5 319 aa12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 IRX2Q9BZI1 471 aaPredicted RBP12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 RGL1Q9NZL6 768 aa12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 ZNRF3Q9ULT6 936 aa12.97□□□□□ -0.33
FNDC3B-202ENST00000415807 ZBED4O75132 1171 aa12.96□□□□□ -0.33
FNDC3B-202ENST00000415807 CYP27A1Q02318 531 aa12.96□□□□□ -0.33
FNDC3B-202ENST00000415807 TMED8Q6PL24 325 aaPredicted RBP12.96□□□□□ -0.33
FNDC3B-202ENST00000415807 ADAM9Q13443 819 aa12.96□□□□□ -0.33
FNDC3B-202ENST00000415807 TCP11X2Q5H9J9 407 aa12.96□□□□□ -0.33
FNDC3B-202ENST00000415807 DACT2Q5SW24 774 aa12.96□□□□□ -0.33
FNDC3B-202ENST00000415807 ZDHHC15Q96MV8 337 aa12.96□□□□□ -0.33
FNDC3B-202ENST00000415807 ZNF577Q9BSK1 485 aa12.96□□□□□ -0.33
FNDC3B-202ENST00000415807 RWDD2AQ9UIY3 292 aa12.96□□□□□ -0.33
FNDC3B-202ENST00000415807 MYH2Q9UKX2 1941 aa12.96□□□□□ -0.33
FNDC3B-202ENST00000415807 BMP6P22004 513 aa12.96□□□□□ -0.33
FNDC3B-202ENST00000415807 STYK1Q6J9G0 422 aa12.96□□□□□ -0.33
FNDC3B-202ENST00000415807 POTEAQ6S8J7 498 aa12.96□□□□□ -0.33
FNDC3B-202ENST00000415807 NAP1L4Q99733 375 aaKnown RBP12.96□□□□□ -0.33
FNDC3B-202ENST00000415807 TMOD4Q9NZQ9 345 aa12.96□□□□□ -0.33
FNDC3B-202ENST00000415807 USP54Q70EL1 1684 aa12.96□□□□□ -0.34
FNDC3B-202ENST00000415807 PRPF4BQ13523 1007 aaKnown RBP12.96□□□□□ -0.34
FNDC3B-202ENST00000415807 NCAPHQ15003 741 aa12.96□□□□□ -0.34
FNDC3B-202ENST00000415807 EEPD1Q7L9B9 569 aa12.96□□□□□ -0.34
FNDC3B-202ENST00000415807 MIER3Q7Z3K6 550 aa12.96□□□□□ -0.34
FNDC3B-202ENST00000415807 ENC1O14682 589 aa12.95□□□□□ -0.34
FNDC3B-202ENST00000415807 PRPF6O94906 941 aaKnown RBP12.95□□□□□ -0.34
FNDC3B-202ENST00000415807 HSP90B2PQ58FF3 399 aa12.95□□□□□ -0.34
FNDC3B-202ENST00000415807 RABGAP1Q9Y3P9 1069 aa12.95□□□□□ -0.34
FNDC3B-202ENST00000415807 ITGB4P16144 1822 aa12.95□□□□□ -0.34
FNDC3B-202ENST00000415807 ASNSP08243 561 aa12.95□□□□□ -0.34
FNDC3B-202ENST00000415807 SLFN12Q8IYM2 578 aa12.95□□□□□ -0.34
FNDC3B-202ENST00000415807 TCHPQ9BT92 498 aa12.95□□□□□ -0.34
FNDC3B-202ENST00000415807 TRIM9Q9C026 710 aa12.95□□□□□ -0.34
FNDC3B-202ENST00000415807 PRR12Q9ULL5 1215 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms