RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 TMEM240Q5SV17 173 aa18.11■□□□□ 0.49
ACTB-202ENST00000414620 SEPT14Q6ZU15 432 aa18.11■□□□□ 0.49
ACTB-202ENST00000414620 STOX1Q6ZVD7 989 aa18.11■□□□□ 0.49
ACTB-202ENST00000414620 RGS22Q8NE09 1264 aa18.11■□□□□ 0.49
ACTB-202ENST00000414620 CDX2Q99626 313 aaPredicted RBP18.11■□□□□ 0.49
ACTB-202ENST00000414620 GPHNQ9NQX3 736 aaPredicted RBP18.11■□□□□ 0.49
ACTB-202ENST00000414620 MAD2L2Q9UI95 211 aa18.11■□□□□ 0.49
ACTB-202ENST00000414620 MRPL11Q9Y3B7 192 aaKnown RBP18.11■□□□□ 0.49
ACTB-202ENST00000414620 U3KPZ7 1027 aaPredicted RBP18.11■□□□□ 0.49
ACTB-202ENST00000414620 DOCK5Q9H7D0 1870 aa18.11■□□□□ 0.49
ACTB-202ENST00000414620 KLRF2D3W0D1 207 aa18.1■□□□□ 0.49
ACTB-202ENST00000414620 IFIT3O14879 490 aaKnown RBP18.1■□□□□ 0.49
ACTB-202ENST00000414620 NKRFO15226 690 aaKnown RBP eCLIP18.1■□□□□ 0.492e-12■□□□□ 9.3
ACTB-202ENST00000414620 SGSM2O43147 1006 aa18.1■□□□□ 0.49
ACTB-202ENST00000414620 CFBP00751 764 aa18.1■□□□□ 0.49
ACTB-202ENST00000414620 EIF2AK2P19525 551 aaKnown RBP18.1■□□□□ 0.49
ACTB-202ENST00000414620 CHMP4BP1P59074 171 aa18.1■□□□□ 0.49
ACTB-202ENST00000414620 TTLL4Q14679 1199 aa18.1■□□□□ 0.49
ACTB-202ENST00000414620 FAM47CQ5HY64 1035 aa18.1■□□□□ 0.49
ACTB-202ENST00000414620 ZNF365Q70YC5 407 aa18.1■□□□□ 0.49
ACTB-202ENST00000414620 RALYLQ86SE5 291 aaKnown RBP18.1■□□□□ 0.49
ACTB-202ENST00000414620 HOMER1Q86YM7 354 aa18.1■□□□□ 0.49
ACTB-202ENST00000414620 MCF2L2Q86YR7 1114 aa18.1■□□□□ 0.49
ACTB-202ENST00000414620 MYLIPQ8WY64 445 aa18.1■□□□□ 0.49
ACTB-202ENST00000414620 RMDN3Q96TC7 470 aa18.1■□□□□ 0.49
ACTB-202ENST00000414620 MTG1Q9BT17 334 aaPredicted RBP18.1■□□□□ 0.49
ACTB-202ENST00000414620 NOC4LQ9BVI4 516 aaKnown RBP18.1■□□□□ 0.49
ACTB-202ENST00000414620 ALDH8A1Q9H2A2 487 aaPredicted RBP18.1■□□□□ 0.49
ACTB-202ENST00000414620 TRMT13Q9NUP7 481 aaKnown RBP18.1■□□□□ 0.49
ACTB-202ENST00000414620 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.09■□□□□ 0.49
ACTB-202ENST00000414620 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.09■□□□□ 0.49
ACTB-202ENST00000414620 GRXCR1A8MXD5 290 aa18.09■□□□□ 0.49
ACTB-202ENST00000414620 E7EWF7 191 aa18.09■□□□□ 0.49
ACTB-202ENST00000414620 PPP1R11O60927 126 aaPredicted RBP18.09■□□□□ 0.49
ACTB-202ENST00000414620 CYP2C9P11712 490 aa18.09■□□□□ 0.49
ACTB-202ENST00000414620 DNAJB2P25686 324 aa18.09■□□□□ 0.49
ACTB-202ENST00000414620 GRM4Q14833 912 aa18.09■□□□□ 0.49
ACTB-202ENST00000414620 WTAPQ15007 396 aa18.09■□□□□ 0.49
ACTB-202ENST00000414620 ARHGEF16Q5VV41 709 aa18.09■□□□□ 0.49
ACTB-202ENST00000414620 PSRC1Q6PGN9 363 aaPredicted RBP18.09■□□□□ 0.49
ACTB-202ENST00000414620 NCOA7Q8NI08 942 aa18.09■□□□□ 0.49
ACTB-202ENST00000414620 AMNQ9BXJ7 453 aa18.09■□□□□ 0.49
ACTB-202ENST00000414620 WNT8AQ9H1J5 351 aa18.09■□□□□ 0.49
ACTB-202ENST00000414620 IL23AQ9NPF7 189 aa18.09■□□□□ 0.49
ACTB-202ENST00000414620 LAMA2P24043 3122 aaKnown RBP18.08■□□□□ 0.49
ACTB-202ENST00000414620 ERICH2A1L162 156 aa18.08■□□□□ 0.48
ACTB-202ENST00000414620 PALM3A6NDB9 673 aaPredicted RBP18.08■□□□□ 0.48
ACTB-202ENST00000414620 OPLAHO14841 1288 aa18.08■□□□□ 0.48
ACTB-202ENST00000414620 LY6KQ17RY6 165 aa18.08■□□□□ 0.48
ACTB-202ENST00000414620 SLC35G1Q2M3R5 365 aa18.08■□□□□ 0.48
ACTB-202ENST00000414620 BRDTQ58F21 947 aaPredicted RBP18.08■□□□□ 0.48
ACTB-202ENST00000414620 NSUN6Q8TEA1 469 aaKnown RBP18.08■□□□□ 0.48
ACTB-202ENST00000414620 SCLYQ96I15 445 aa18.08■□□□□ 0.48
ACTB-202ENST00000414620 RBM8AQ9Y5S9 174 aaKnown RBP18.08■□□□□ 0.48
ACTB-202ENST00000414620 PBX2P40425 430 aa18.07■□□□□ 0.48
ACTB-202ENST00000414620 NBPF20Q3BBV1 942 aa18.07■□□□□ 0.48
ACTB-202ENST00000414620 MTMR8Q96EF0 704 aa18.07■□□□□ 0.48
ACTB-202ENST00000414620 PIGSQ96S52 555 aa18.07■□□□□ 0.48
ACTB-202ENST00000414620 SEZ6LQ9BYH1 1024 aa18.07■□□□□ 0.48
ACTB-202ENST00000414620 PXMP2Q9NR77 195 aa18.07■□□□□ 0.48
ACTB-202ENST00000414620 A6NJR5 290 aa18.06■□□□□ 0.48
ACTB-202ENST00000414620 DLL1O00548 723 aa18.06■□□□□ 0.48
ACTB-202ENST00000414620 ZBTB5O15062 677 aa18.06■□□□□ 0.48
ACTB-202ENST00000414620 HOXA13P31271 388 aaPredicted RBP18.06■□□□□ 0.48
ACTB-202ENST00000414620 ANTXR2P58335 489 aa18.06■□□□□ 0.48
ACTB-202ENST00000414620 STXBP2Q15833 593 aa18.06■□□□□ 0.48
ACTB-202ENST00000414620 TMEM67Q5HYA8 995 aa18.06■□□□□ 0.48
ACTB-202ENST00000414620 CCDC62Q6P9F0 684 aa18.06■□□□□ 0.48
ACTB-202ENST00000414620 OTOP2Q7RTS6 562 aa18.06■□□□□ 0.48
ACTB-202ENST00000414620 SKAP1Q86WV1 359 aa18.06■□□□□ 0.48
ACTB-202ENST00000414620 AFG1LQ8WV93 481 aa18.06■□□□□ 0.48
ACTB-202ENST00000414620 PIBF1Q8WXW3 757 aa18.06■□□□□ 0.48
ACTB-202ENST00000414620 TIFAQ96CG3 184 aa18.06■□□□□ 0.48
ACTB-202ENST00000414620 CXXC1Q9P0U4 656 aaPredicted RBP18.06■□□□□ 0.48
ACTB-202ENST00000414620 PCDHA1Q9Y5I3 950 aa18.06■□□□□ 0.48
ACTB-202ENST00000414620 SORBS3O60504 671 aa18.05■□□□□ 0.48
ACTB-202ENST00000414620 GH1P01241 217 aa18.05■□□□□ 0.48
ACTB-202ENST00000414620 FGBP02675 491 aa18.05■□□□□ 0.48
ACTB-202ENST00000414620 MMP3P08254 477 aa18.05■□□□□ 0.48
ACTB-202ENST00000414620 MYCLP12524 364 aaPredicted RBP18.05■□□□□ 0.48
ACTB-202ENST00000414620 FOSL2P15408 326 aa18.05■□□□□ 0.48
ACTB-202ENST00000414620 HSD17B4P51659 736 aa18.05■□□□□ 0.48
ACTB-202ENST00000414620 ARHGAP1Q07960 439 aa18.05■□□□□ 0.48
ACTB-202ENST00000414620 SART3Q15020 963 aaKnown RBP18.05■□□□□ 0.48
ACTB-202ENST00000414620 RASIP1Q5U651 963 aa18.05■□□□□ 0.48
ACTB-202ENST00000414620 MB21D2Q8IYB1 491 aaPredicted RBP18.05■□□□□ 0.48
ACTB-202ENST00000414620 MAFAQ8NHW3 353 aaPredicted RBP18.05■□□□□ 0.48
ACTB-202ENST00000414620 MAP4K1Q92918 833 aa18.05■□□□□ 0.48
ACTB-202ENST00000414620 IWS1Q96ST2 819 aa18.05■□□□□ 0.48
ACTB-202ENST00000414620 MYL10Q9BUA6 226 aa18.05■□□□□ 0.48
ACTB-202ENST00000414620 PBX4Q9BYU1 374 aa18.05■□□□□ 0.48
ACTB-202ENST00000414620 MAF1Q9H063 256 aa18.05■□□□□ 0.48
ACTB-202ENST00000414620 PTPRSQ13332 1948 aa18.05■□□□□ 0.48
ACTB-202ENST00000414620 TET1Q8NFU7 2136 aa18.04■□□□□ 0.48
ACTB-202ENST00000414620 TMEM265A0A087WTH1 108 aa18.04■□□□□ 0.48
ACTB-202ENST00000414620 CYTH3O43739 400 aa18.04■□□□□ 0.48
ACTB-202ENST00000414620 KPNA6O60684 536 aa18.04■□□□□ 0.48
ACTB-202ENST00000414620 NR3C2P08235 984 aa18.04■□□□□ 0.48
ACTB-202ENST00000414620 GRIN2CQ14957 1233 aa18.04■□□□□ 0.48
ACTB-202ENST00000414620 DEFB128Q7Z7B8 93 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms