RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 PDGFBP01127 241 aaPredicted RBP13.09□□□□□ -0.31
CRIM1-202ENST00000413985 OAZ1P54368 228 aa13.09□□□□□ -0.31
CRIM1-202ENST00000413985 HTRA4P83105 476 aaPredicted RBP13.09□□□□□ -0.31
CRIM1-202ENST00000413985 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
CRIM1-202ENST00000413985 SMAD4Q13485 552 aaKnown RBP13.09□□□□□ -0.31
CRIM1-202ENST00000413985 MICAL3Q7RTP6 2002 aa13.09□□□□□ -0.31
CRIM1-202ENST00000413985 MYOCDQ8IZQ8 938 aa13.09□□□□□ -0.31
CRIM1-202ENST00000413985 FAM9BQ8IZU0 186 aa13.09□□□□□ -0.31
CRIM1-202ENST00000413985 LRRC47Q8N1G4 583 aaKnown RBP13.09□□□□□ -0.31
CRIM1-202ENST00000413985 CAGE1Q8TC20 777 aa13.09□□□□□ -0.31
CRIM1-202ENST00000413985 SP7Q8TDD2 431 aaPredicted RBP13.09□□□□□ -0.31
CRIM1-202ENST00000413985 TRERF1Q96PN7 1200 aa13.09□□□□□ -0.31
CRIM1-202ENST00000413985 CYP39A1Q9NYL5 469 aa13.09□□□□□ -0.31
CRIM1-202ENST00000413985 CLIP2Q9UDT6 1046 aa13.09□□□□□ -0.31
CRIM1-202ENST00000413985 INSL6Q9Y581 213 aa13.09□□□□□ -0.31
CRIM1-202ENST00000413985 CACNA1HO95180 2353 aa13.09□□□□□ -0.31
CRIM1-202ENST00000413985 KDM4AO75164 1064 aa13.08□□□□□ -0.32
CRIM1-202ENST00000413985 CKBP12277 381 aa13.08□□□□□ -0.32
CRIM1-202ENST00000413985 ALAS1P13196 640 aa13.08□□□□□ -0.32
CRIM1-202ENST00000413985 SLFN5Q08AF3 891 aa13.08□□□□□ -0.32
CRIM1-202ENST00000413985 IKBKEQ14164 716 aa13.08□□□□□ -0.32
CRIM1-202ENST00000413985 MBTPS1Q14703 1052 aa13.08□□□□□ -0.32
CRIM1-202ENST00000413985 TRAF7Q6Q0C0 670 aa13.08□□□□□ -0.32
CRIM1-202ENST00000413985 TMEM192Q8IY95 271 aa13.08□□□□□ -0.32
CRIM1-202ENST00000413985 MORC4Q8TE76 937 aa13.08□□□□□ -0.32
CRIM1-202ENST00000413985 WNT8BQ93098 351 aa13.08□□□□□ -0.32
CRIM1-202ENST00000413985 NYAP2Q9P242 653 aa13.08□□□□□ -0.32
CRIM1-202ENST00000413985 FEM1BQ9UK73 627 aa13.08□□□□□ -0.32
CRIM1-202ENST00000413985 LGR5O75473 907 aa13.07□□□□□ -0.32
CRIM1-202ENST00000413985 RASA1P20936 1047 aa13.07□□□□□ -0.32
CRIM1-202ENST00000413985 PTPN11Q06124 597 aaPredicted RBP13.07□□□□□ -0.32
CRIM1-202ENST00000413985 SIGLEC14Q08ET2 396 aa13.07□□□□□ -0.32
CRIM1-202ENST00000413985 CTR9Q6PD62 1173 aa13.07□□□□□ -0.32
CRIM1-202ENST00000413985 TMED8Q6PL24 325 aaPredicted RBP13.07□□□□□ -0.32
CRIM1-202ENST00000413985 FBXO11Q86XK2 927 aa13.07□□□□□ -0.32
CRIM1-202ENST00000413985 IGFLR1Q9H665 355 aa13.07□□□□□ -0.32
CRIM1-202ENST00000413985 ATP8A2Q9NTI2 1148 aa13.07□□□□□ -0.32
CRIM1-202ENST00000413985 CD207Q9UJ71 328 aa13.07□□□□□ -0.32
CRIM1-202ENST00000413985 DNAH14Q0VDD8 3507 aa13.07□□□□□ -0.32
CRIM1-202ENST00000413985 CACNA1BQ00975 2339 aa13.07□□□□□ -0.32
CRIM1-202ENST00000413985 LOC730098B7Z3J9 87 aa13.06□□□□□ -0.32
CRIM1-202ENST00000413985 NSMFQ6X4W1 530 aa13.06□□□□□ -0.32
CRIM1-202ENST00000413985 ADSSL1Q8N142 457 aa13.06□□□□□ -0.32
CRIM1-202ENST00000413985 CCDC155Q8N6L0 562 aa13.06□□□□□ -0.32
CRIM1-202ENST00000413985 SSH3Q8TE77 659 aa13.06□□□□□ -0.32
CRIM1-202ENST00000413985 IRF2BPLQ9H1B7 796 aa13.06□□□□□ -0.32
CRIM1-202ENST00000413985 C1orf115Q9H7X2 142 aa13.06□□□□□ -0.32
CRIM1-202ENST00000413985 ISY1Q9ULR0 285 aaKnown RBP13.06□□□□□ -0.32
CRIM1-202ENST00000413985 VPS13AQ96RL7 3174 aa13.06□□□□□ -0.32
CRIM1-202ENST00000413985 IGKV6D-41A0A0C4DH26 115 aa13.05□□□□□ -0.32
CRIM1-202ENST00000413985 RBM47A0AV96 593 aaKnown RBP13.05□□□□□ -0.32
CRIM1-202ENST00000413985 TMEM232C9JQI7 657 aa13.05□□□□□ -0.32
CRIM1-202ENST00000413985 GOLIM4O00461 696 aa13.05□□□□□ -0.32
CRIM1-202ENST00000413985 GRM6O15303 877 aa13.05□□□□□ -0.32
CRIM1-202ENST00000413985 NBL1P41271 181 aa13.05□□□□□ -0.32
CRIM1-202ENST00000413985 ALDH5A1P51649 535 aaPredicted RBP13.05□□□□□ -0.32
CRIM1-202ENST00000413985 RBL2Q08999 1139 aa13.05□□□□□ -0.32
CRIM1-202ENST00000413985 ZNF618Q5T7W0 954 aa13.05□□□□□ -0.32
CRIM1-202ENST00000413985 RASGRP2Q7LDG7 609 aa13.05□□□□□ -0.32
CRIM1-202ENST00000413985 FRMD5Q7Z6J6 570 aa13.05□□□□□ -0.32
CRIM1-202ENST00000413985 CNTNAP3BQ96NU0 1288 aa13.05□□□□□ -0.32
CRIM1-202ENST00000413985 SAMD11Q96NU1 681 aa13.05□□□□□ -0.32
CRIM1-202ENST00000413985 DNAJC2Q99543 621 aaKnown RBP13.05□□□□□ -0.32
CRIM1-202ENST00000413985 CNTNAP3Q9BZ76 1288 aa13.05□□□□□ -0.32
CRIM1-202ENST00000413985 ZBED9Q6R2W3 1325 aa13.05□□□□□ -0.32
CRIM1-202ENST00000413985 FAM186AA6NE01 2351 aa13.05□□□□□ -0.32
CRIM1-202ENST00000413985 RALGAPA2Q2PPJ7 1873 aa13.04□□□□□ -0.32
CRIM1-202ENST00000413985 A6NJR5 290 aa13.04□□□□□ -0.32
CRIM1-202ENST00000413985 GALR2O43603 387 aaPredicted RBP13.04□□□□□ -0.32
CRIM1-202ENST00000413985 EFCAB14O75071 495 aa13.04□□□□□ -0.32
CRIM1-202ENST00000413985 UPP2O95045 317 aa13.04□□□□□ -0.32
CRIM1-202ENST00000413985 ARIH2O95376 493 aa13.04□□□□□ -0.32
CRIM1-202ENST00000413985 AMHP03971 560 aa13.04□□□□□ -0.32
CRIM1-202ENST00000413985 TRIM71Q2Q1W2 868 aaKnown RBP13.04□□□□□ -0.32
CRIM1-202ENST00000413985 AACSQ86V21 672 aa13.04□□□□□ -0.32
CRIM1-202ENST00000413985 DBF4BQ8NFT6 615 aa13.04□□□□□ -0.32
CRIM1-202ENST00000413985 KAT2BQ92831 832 aa13.04□□□□□ -0.32
CRIM1-202ENST00000413985 RMDN1Q96DB5 314 aa13.04□□□□□ -0.32
CRIM1-202ENST00000413985 CEP95Q96GE4 821 aa13.04□□□□□ -0.32
CRIM1-202ENST00000413985 MSLNLQ96KJ4 702 aa13.04□□□□□ -0.32
CRIM1-202ENST00000413985 YME1L1Q96TA2 773 aa13.04□□□□□ -0.32
CRIM1-202ENST00000413985 OSBPL7Q9BZF2 842 aa13.04□□□□□ -0.32
CRIM1-202ENST00000413985 INCENPQ9NQS7 918 aa13.04□□□□□ -0.32
CRIM1-202ENST00000413985 NCK2O43639 380 aa13.03□□□□□ -0.32
CRIM1-202ENST00000413985 LINC00271P0C7V0 271 aa13.03□□□□□ -0.32
CRIM1-202ENST00000413985 BMP3P12645 472 aa13.03□□□□□ -0.32
CRIM1-202ENST00000413985 CTNNB1P35222 781 aa13.03□□□□□ -0.32
CRIM1-202ENST00000413985 RRP1P56182 461 aaKnown RBP13.03□□□□□ -0.32
CRIM1-202ENST00000413985 ZNF200P98182 395 aaPredicted RBP13.03□□□□□ -0.32
CRIM1-202ENST00000413985 ATP8B2P98198 1209 aa13.03□□□□□ -0.32
CRIM1-202ENST00000413985 BAATQ14032 418 aaPredicted RBP13.03□□□□□ -0.32
CRIM1-202ENST00000413985 CBX2Q14781 532 aaPredicted RBP13.03□□□□□ -0.32
CRIM1-202ENST00000413985 PPP2R5BQ15173 497 aa13.03□□□□□ -0.32
CRIM1-202ENST00000413985 TTF1Q15361 905 aaPredicted RBP13.03□□□□□ -0.32
CRIM1-202ENST00000413985 TKFCQ3LXA3 575 aa13.03□□□□□ -0.32
CRIM1-202ENST00000413985 SLFN13Q68D06 897 aa13.03□□□□□ -0.32
CRIM1-202ENST00000413985 AMOTL1Q8IY63 956 aa13.03□□□□□ -0.32
CRIM1-202ENST00000413985 HDAC6Q9UBN7 1215 aa13.03□□□□□ -0.32
CRIM1-202ENST00000413985 NOP58Q9Y2X3 529 aaKnown RBP13.03□□□□□ -0.32
CRIM1-202ENST00000413985 SLC4A4Q9Y6R1 1079 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms