RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-233	ENST00000412685		A0A0U1RQJ8	604 aa		18.42	■□□□□ 0.54
HCG18-233	ENST00000412685	NPM3	O75607	178 aa	Known RBP	18.42	■□□□□ 0.54
HCG18-233	ENST00000412685	QRICH1	Q2TAL8	776 aa		18.42	■□□□□ 0.54
HCG18-233	ENST00000412685	SLFN13	Q68D06	897 aa		18.42	■□□□□ 0.54
HCG18-233	ENST00000412685	ATRIP	Q8WXE1	791 aa		18.42	■□□□□ 0.54
HCG18-233	ENST00000412685	HAS1	Q92839	578 aa		18.42	■□□□□ 0.54
HCG18-233	ENST00000412685	NUDT12	Q9BQG2	462 aa		18.42	■□□□□ 0.54
HCG18-233	ENST00000412685	TUBGCP2	Q9BSJ2	902 aa		18.42	■□□□□ 0.54
HCG18-233	ENST00000412685	CARD6	Q9BX69	1037 aa		18.42	■□□□□ 0.54
HCG18-233	ENST00000412685	ATF5	Q9Y2D1	282 aa	Predicted RBP	18.42	■□□□□ 0.54
HCG18-233	ENST00000412685	TTC26	A0AVF1	554 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	SPDYE4	A6NLX3	237 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	GCFC2	P16383	781 aa	Known RBP	18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	CHRNA5	P30532	468 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	DNM2	P50570	870 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	TATDN1	Q6P1N9	297 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	UNC13D	Q70J99	1090 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	RAD54L	Q92698	747 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	MYH7B	A7E2Y1	1941 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	PVALEF	A0A1B0GWK0	134 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685		B4DLN1	442 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	TADA3	O75528	432 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	SEPT2	Q15019	361 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	ZNF772	Q68DY9	489 aa	Predicted RBP	18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	FAM114A1	Q8IWE2	563 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	CNOT6L	Q96LI5	555 aa	Known RBP	18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	GLT8D2	Q9H1C3	349 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	SLC39A2	Q9NP94	309 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	PCDHA1	Q9Y5I3	950 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	MRFAP1	Q9Y605	127 aa		18.41	■□□□□ 0.54
HCG18-233	ENST00000412685	KIF5C	O60282	957 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	CBX1	P83916	185 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	ICA1	Q05084	483 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	AOC3	Q16853	763 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	TMEM119	Q4V9L6	283 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	SIAH1	Q8IUQ4	282 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	ACRBP	Q8NEB7	543 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	UBXN4	Q92575	508 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	ZNF646	O15015	1829 aa	Predicted RBP	18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	USP17L15	C9J2P7	530 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	USP17L13	C9JLJ4	530 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	USP17L11	C9JVI0	530 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	USP17L18	D6R9N7	530 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	USP17L22	D6RA61	530 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	USP17L17	D6RBQ6	530 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	USP17L19	D6RCP7	530 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	USP17L20	D6RJB6	530 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	USP17L24	Q0WX57	530 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	CDC37	Q16543	378 aa	Predicted RBP	18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	ARHGAP29	Q52LW3	1261 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	USP17L6P	Q6QN14	398 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	TMEM179	Q6ZVK1	233 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	DYM	Q7RTS9	669 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	KCNK18	Q7Z418	384 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	CNKSR1	Q969H4	720 aa		18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	LUC7L2	Q9Y383	392 aa	Known RBP	18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	GOLGB1	Q14789	3259 aa	Known RBP	18.4	■□□□□ 0.54
HCG18-233	ENST00000412685	MARCH6	O60337	910 aa		18.39	■□□□□ 0.54
HCG18-233	ENST00000412685	OR8K1	Q8NGG5	319 aa		18.39	■□□□□ 0.54
HCG18-233	ENST00000412685	GJA10	Q969M2	543 aa		18.39	■□□□□ 0.54
HCG18-233	ENST00000412685	SEMA6B	Q9H3T3	888 aa		18.39	■□□□□ 0.54
HCG18-233	ENST00000412685	CAPN11	Q9UMQ6	739 aa		18.39	■□□□□ 0.54
HCG18-233	ENST00000412685	EFCAB8	A8MWE9	144 aa		18.39	■□□□□ 0.53
HCG18-233	ENST00000412685	H2AFX	P16104	143 aa	Predicted RBP	18.39	■□□□□ 0.53
HCG18-233	ENST00000412685	CENPP	Q6IPU0	288 aa		18.39	■□□□□ 0.53
HCG18-233	ENST00000412685	DNAJC7	Q99615	494 aa		18.39	■□□□□ 0.53
HCG18-233	ENST00000412685	NAP1L4	Q99733	375 aa	Known RBP	18.39	■□□□□ 0.53
HCG18-233	ENST00000412685	PCDHA12	Q9UN75	941 aa		18.39	■□□□□ 0.53
HCG18-233	ENST00000412685	GDF11	O95390	407 aa		18.38	■□□□□ 0.53
HCG18-233	ENST00000412685	MTIF2	P46199	727 aa	Known RBP	18.38	■□□□□ 0.53
HCG18-233	ENST00000412685	C7orf43	Q8WVR3	580 aa		18.38	■□□□□ 0.53
HCG18-233	ENST00000412685	CHP1	Q99653	195 aa		18.38	■□□□□ 0.53
HCG18-233	ENST00000412685	LRRC27	Q9C0I9	530 aa		18.38	■□□□□ 0.53
HCG18-233	ENST00000412685	TDRD3	Q9H7E2	651 aa	Known RBP	18.38	■□□□□ 0.53
HCG18-233	ENST00000412685	DDX41	Q9UJV9	622 aa	Known RBP	18.38	■□□□□ 0.53
HCG18-233	ENST00000412685	TBC1D8B	Q0IIM8	1120 aa		18.38	■□□□□ 0.53
HCG18-233	ENST00000412685	ECM1	Q16610	540 aa		18.38	■□□□□ 0.53
HCG18-233	ENST00000412685	ABCB5	Q2M3G0	1257 aa		18.38	■□□□□ 0.53
HCG18-233	ENST00000412685	DDX12P	Q92771	950 aa		18.38	■□□□□ 0.53
HCG18-233	ENST00000412685		F5H6K3	240 aa		18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	IDE	P14735	1019 aa		18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	KLRC3	Q07444	240 aa		18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	SLF1	Q9BQI6	1058 aa		18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	OGFR	Q9NZT2	677 aa		18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	ATRNL1	Q5VV63	1379 aa		18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	PPP2R3A	Q06190	1150 aa		18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	MIIP	Q5JXC2	388 aa		18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	GUF1	Q8N442	669 aa	Known RBP	18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	GMCL1P1	Q8NEA9	526 aa		18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	NOC4L	Q9BVI4	516 aa	Known RBP	18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	ANO3	Q9BYT9	981 aa		18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	USP11	P51784	963 aa		18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	TSR1	Q2NL82	804 aa	Known RBP	18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	ZNF569	Q5MCW4	686 aa		18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	TTYH3	Q9C0H2	523 aa		18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	EPN1	Q9Y6I3	576 aa	Predicted RBP	18.37	■□□□□ 0.53
HCG18-233	ENST00000412685	ENTPD3	O75355	529 aa		18.36	■□□□□ 0.53
HCG18-233	ENST00000412685	NDUFA10	O95299	355 aa		18.36	■□□□□ 0.53
HCG18-233	ENST00000412685	TRIM21	P19474	475 aa	Known RBP	18.36	■□□□□ 0.53
HCG18-233	ENST00000412685	EHHADH	Q08426	723 aa		18.36	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms