RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 IRGCQ6NXR0 463 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 STK11IPQ8N1F8 1099 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 WDR60Q8WVS4 1066 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 RPGRIP1Q96KN7 1286 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 ZSCAN31Q96LW9 406 aaPredicted RBP5.75□□□□□ -1.49
HERC4-205ENST00000412272 SMC6Q96SB8 1091 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 DRC3Q9H069 523 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 SH2B1Q9NRF2 756 aaPredicted RBP5.75□□□□□ -1.49
HERC4-205ENST00000412272 DAAM1Q9Y4D1 1078 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 NOX1Q9Y5S8 564 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 ZFYVE9O95405 1425 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 ADGRB3O60242 1522 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 A0A0J9YVX5 310 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 VWA3AA6NCI4 1184 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 USO1O60763 962 aaKnown RBP5.75□□□□□ -1.49
HERC4-205ENST00000412272 URI1O94763 535 aaPredicted RBP5.75□□□□□ -1.49
HERC4-205ENST00000412272 PCP11498 1178 aaKnown RBP5.75□□□□□ -1.49
HERC4-205ENST00000412272 KRT85P78386 507 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 COG2Q14746 738 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 SEPT7Q16181 437 aaKnown RBP5.75□□□□□ -1.49
HERC4-205ENST00000412272 MSL1Q68DK7 614 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 UNC5DQ6UXZ4 953 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 USP6NLQ92738 828 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 CCSER1Q9C0I3 900 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 BHMT2Q9H2M3 363 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.75□□□□□ -1.49
HERC4-205ENST00000412272 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.75□□□□□ -1.49
HERC4-205ENST00000412272 FAM32AQ9Y421 112 aaKnown RBP5.75□□□□□ -1.49
HERC4-205ENST00000412272 OVOS2A0A0G2JMS6 1433 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 OVOS2A0A0J9YW53 1432 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 KIF28PB7ZC32 967 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 RNF220Q5VTB9 566 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 OVOS2Q6IE36 1432 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 OR52E8Q6IFG1 317 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 LVRNQ6Q4G3 990 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 CEP128Q6ZU80 1094 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 TTC6Q86TZ1 520 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 NPLOC4Q8TAT6 608 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 WDR66Q8TBY9 1149 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 BRSK1Q8TDC3 778 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 DYDC1Q8WWB3 177 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 CLMNQ96JQ2 1002 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 PSKH2Q96QS6 385 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 NAT10Q9H0A0 1025 aaKnown RBP5.75□□□□□ -1.49
HERC4-205ENST00000412272 SEPT10Q9P0V9 454 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 KIF20BQ96Q89 1820 aa5.75□□□□□ -1.49
HERC4-205ENST00000412272 PNPLA6Q8IY17 1366 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 TNFRSF10AO00220 468 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 DIAPH2O60879 1101 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 PORP16435 677 aaPredicted RBP5.74□□□□□ -1.49
HERC4-205ENST00000412272 SKIV2L2P42285 1042 aaKnown RBP5.74□□□□□ -1.49
HERC4-205ENST00000412272 B2MP61769 119 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 GNL2Q13823 731 aaKnown RBP5.74□□□□□ -1.49
HERC4-205ENST00000412272 BYSLQ13895 437 aaKnown RBP5.74□□□□□ -1.49
HERC4-205ENST00000412272 PRKG1Q13976 671 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 BBS9Q3SYG4 887 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 ABTB2Q8N961 1025 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 SLAIN1Q8ND83 568 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 CCHCR1Q8TD31 782 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 DQX1Q8TE96 717 aaKnown RBP5.74□□□□□ -1.49
HERC4-205ENST00000412272 ERP44Q9BS26 406 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 MOV10L1Q9BXT6 1211 aaKnown RBP5.74□□□□□ -1.49
HERC4-205ENST00000412272 NOP53Q9NZM5 478 aaKnown RBP5.74□□□□□ -1.49
HERC4-205ENST00000412272 STAP2Q9UGK3 403 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 LIMCH1Q9UPQ0 1083 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.74□□□□□ -1.495e-7■□□□□ 10.2
HERC4-205ENST00000412272 IKBKBO14920 756 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 GNA14O95837 355 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 SPATA31D3P0C874 917 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 EPB41P11171 864 aaKnown RBP5.74□□□□□ -1.49
HERC4-205ENST00000412272 TMTC4Q5T4D3 741 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 KCTD16Q68DU8 428 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 SPATA31D4Q6ZUB0 917 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 TMEM139Q8IV31 216 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 SCUBE1Q8IWY4 988 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 TM6SF1Q9BZW5 370 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 EPB41L4AQ9HCS5 686 aaPredicted RBP5.74□□□□□ -1.49
HERC4-205ENST00000412272 PAG1Q9NWQ8 432 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 CDK2AP1O14519 115 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 RBP3P10745 1247 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 ALADP13716 330 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 S100A1P23297 94 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 SP100P23497 879 aaPredicted RBP5.74□□□□□ -1.49
HERC4-205ENST00000412272 GNGT1P63211 74 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 PROSER3Q2NL68 480 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 SIX5Q8N196 739 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 RPGRQ92834 1020 aaKnown RBP5.74□□□□□ -1.49
HERC4-205ENST00000412272 FGD4Q96M96 766 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 ARHGEF38Q9NXL2 777 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 ASAP1Q9ULH1 1129 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 TMEM94Q12767 1356 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 NSD3Q9BZ95 1437 aa5.74□□□□□ -1.49
HERC4-205ENST00000412272 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 CUTAO60888 179 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 OXSR1O95747 527 aaPredicted RBP5.73□□□□□ -1.49
HERC4-205ENST00000412272 PAHP00439 452 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 MRPS35P82673 323 aaKnown RBP5.73□□□□□ -1.49
HERC4-205ENST00000412272 DNM1Q05193 864 aaKnown RBP5.73□□□□□ -1.49
HERC4-205ENST00000412272 WDR45BQ5MNZ6 344 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 SYDE2Q5VT97 1194 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms