RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 KPNA6O60684 536 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 LTBRP36941 435 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 VCPP55072 806 aaKnown RBP8.25□□□□□ -1.09
LSM8-202ENST00000411938 ZXDAP98168 799 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 PTPN11Q06124 597 aaPredicted RBP8.25□□□□□ -1.09
LSM8-202ENST00000411938 GPNMBQ14956 572 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 COL19A1Q14993 1142 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 TTF1Q15361 905 aaPredicted RBP8.25□□□□□ -1.09
LSM8-202ENST00000411938 TCTN1Q2MV58 587 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 ASCL5Q7RTU5 278 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 CAGE1Q8TC20 777 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 EAF2Q96CJ1 260 aaPredicted RBP8.25□□□□□ -1.09
LSM8-202ENST00000411938 SAMD11Q96NU1 681 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 FSD1Q9BTV5 496 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.25□□□□□ -1.09
LSM8-202ENST00000411938 ATP8A2Q9NTI2 1148 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 NYAP2Q9P242 653 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 CLIP2Q9UDT6 1046 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 RAD50Q92878 1312 aa8.25□□□□□ -1.09
LSM8-202ENST00000411938 TANC1Q9C0D5 1861 aa8.24□□□□□ -1.09
LSM8-202ENST00000411938 PROB1E7EW31 1015 aa8.24□□□□□ -1.09
LSM8-202ENST00000411938 H3BNC9 293 aa8.24□□□□□ -1.09
LSM8-202ENST00000411938 NBNO60934 754 aa8.24□□□□□ -1.09
LSM8-202ENST00000411938 KDM4AO75164 1064 aa8.24□□□□□ -1.09
LSM8-202ENST00000411938 BCAR3O75815 825 aa8.24□□□□□ -1.09
LSM8-202ENST00000411938 MBD4O95243 580 aa8.24□□□□□ -1.09
LSM8-202ENST00000411938 PARNO95453 639 aaKnown RBP8.24□□□□□ -1.09
LSM8-202ENST00000411938 ALAS1P13196 640 aa8.24□□□□□ -1.09
LSM8-202ENST00000411938 AVPR2P30518 371 aa8.24□□□□□ -1.09
LSM8-202ENST00000411938 DEKP35659 375 aaKnown RBP8.24□□□□□ -1.09
LSM8-202ENST00000411938 DLX2Q07687 328 aaPredicted RBP8.24□□□□□ -1.09
LSM8-202ENST00000411938 IKQ13123 557 aaPredicted RBP8.24□□□□□ -1.09
LSM8-202ENST00000411938 SMAD4Q13485 552 aaKnown RBP8.24□□□□□ -1.09
LSM8-202ENST00000411938 NBR1Q14596 966 aa8.24□□□□□ -1.09
LSM8-202ENST00000411938 NSMFQ6X4W1 530 aa8.24□□□□□ -1.09
LSM8-202ENST00000411938 MYOCDQ8IZQ8 938 aa8.24□□□□□ -1.09
LSM8-202ENST00000411938 TRERF1Q96PN7 1200 aa8.24□□□□□ -1.09
LSM8-202ENST00000411938 ALG13Q9NP73 1137 aaKnown RBP8.24□□□□□ -1.09
LSM8-202ENST00000411938 SCN10AQ9Y5Y9 1956 aa8.24□□□□□ -1.09
LSM8-202ENST00000411938 CEP250Q9BV73 2442 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 C5orf42Q9H799 3197 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 PRR23AA6NEV1 266 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 KRT37O76014 449 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 CXCL10P02778 98 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 AMHP03971 560 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 FDX1P10109 184 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 SIGLEC14Q08ET2 396 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 MKRN4PQ13434 485 aaPredicted RBP8.23□□□□□ -1.09
LSM8-202ENST00000411938 POLA2Q14181 598 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 TKFCQ3LXA3 575 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.23□□□□□ -1.09
LSM8-202ENST00000411938 TMEM192Q8IY95 271 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 STK11IPQ8N1F8 1099 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 PURBQ96QR8 312 aaKnown RBP8.23□□□□□ -1.09
LSM8-202ENST00000411938 YME1L1Q96TA2 773 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 IGFLR1Q9H665 355 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 MKNK2Q9HBH9 465 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 CYP39A1Q9NYL5 469 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 CD207Q9UJ71 328 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 ATRXP46100 2492 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 WDR87Q6ZQQ6 2873 aa8.23□□□□□ -1.09
LSM8-202ENST00000411938 TCRBV5S4A2TA0A5A2 114 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 A6NJR5 290 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 TMEM232C9JQI7 657 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 RBAK-RBAKDNI3L0D1 243 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 GOLIM4O00461 696 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 CKBP12277 381 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 BMP3P12645 472 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 RASA1P20936 1047 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 HTRA4P83105 476 aaPredicted RBP8.22□□□□□ -1.09
LSM8-202ENST00000411938 ATP8B2P98198 1209 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 HYAL1Q12794 435 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 PPP2R5BQ15173 497 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 CTC1Q2NKJ3 1217 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 MUM1L1Q5H9M0 696 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 SLFN13Q68D06 897 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 GDF6Q6KF10 455 aaPredicted RBP8.22□□□□□ -1.09
LSM8-202ENST00000411938 CTR9Q6PD62 1173 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 AACSQ86V21 672 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 FBXO11Q86XK2 927 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 LRRC47Q8N1G4 583 aaKnown RBP8.22□□□□□ -1.09
LSM8-202ENST00000411938 SP7Q8TDD2 431 aaPredicted RBP8.22□□□□□ -1.09
LSM8-202ENST00000411938 MORC4Q8TE76 937 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 SSH3Q8TE77 659 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 DHX38Q92620 1227 aaKnown RBP8.22□□□□□ -1.09
LSM8-202ENST00000411938 CHMP4CQ96CF2 233 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 CTAGE1Q96RT6 745 aa8.22□□□□□ -1.09
LSM8-202ENST00000411938 DNAJC2Q99543 621 aaKnown RBP8.22□□□□□ -1.09
LSM8-202ENST00000411938 ADD3Q9UEY8 706 aaKnown RBP8.22□□□□□ -1.09
LSM8-202ENST00000411938 BAZ2AQ9UIF9 1905 aaKnown RBP8.22□□□□□ -1.09
LSM8-202ENST00000411938 RBM47A0AV96 593 aaKnown RBP8.21□□□□□ -1.1
LSM8-202ENST00000411938 MED19A0JLT2 244 aaPredicted RBP8.21□□□□□ -1.1
LSM8-202ENST00000411938 NKRFO15226 690 aaKnown RBP eCLIP8.21□□□□□ -1.1
LSM8-202ENST00000411938 TBX10O75333 385 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 LGR5O75473 907 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 UPP2O95045 317 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 CSPG5O95196 566 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 ALDH5A1P51649 535 aaPredicted RBP8.21□□□□□ -1.1
LSM8-202ENST00000411938 STAT2P52630 851 aa8.21□□□□□ -1.1
LSM8-202ENST00000411938 SNAP25P60880 206 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms