RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 PLCG1P19174 1290 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 CYP3A7P24462 503 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 PBX1P40424 430 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 TECP42680 631 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 TCP10Q12799 353 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 KMT5BQ4FZB7 885 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 E4F1Q66K89 784 aaPredicted RBP15.22■□□□□ 0.03
LIMS1-205ENST00000410093 CIAPIN1Q6FI81 312 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 SLFN12Q8IYM2 578 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 AGBL3Q8NEM8 1001 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 FAM151AQ8WW52 585 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 TRIM9Q9C026 710 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 ARHGEF10LQ9HCE6 1279 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 KCNQ5Q9NR82 932 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 EXOC1Q9NV70 894 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 CEP350Q5VT06 3117 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 USP17L10C9JJH3 530 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 F5H6K3 240 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 KLRC4O43908 158 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 FGFR1OPO95684 399 aaKnown RBP15.22■□□□□ 0.03
LIMS1-205ENST00000410093 PRCPP42785 496 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 KLRC3Q07444 240 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 TCP11X2Q5H9J9 407 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 SH3BP5LQ7L8J4 393 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 ZFPM1Q8IX07 1006 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 SH2D4AQ9H788 454 aa15.22■□□□□ 0.03
LIMS1-205ENST00000410093 DDX25Q9UHL0 483 aaKnown RBP15.22■□□□□ 0.03
LIMS1-205ENST00000410093 SPDYE2BA6NHP3 402 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 TMEM232C9JQI7 657 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 PLA2G6O60733 806 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 POTEIP0CG38 1075 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 POTEJP0CG39 1038 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 SPDYE6P0CI01 402 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 TXKP42681 527 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 CXCL9Q07325 125 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 DLGAP5Q15398 846 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 CDC37Q16543 378 aaPredicted RBP15.21■□□□□ 0.03
LIMS1-205ENST00000410093 QRICH1Q2TAL8 776 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 HYIQ5T013 277 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 KCTD1Q719H9 257 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 RASGRP2Q7LDG7 609 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 FAM83AQ86UY5 434 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 PPP1R13BQ96KQ4 1090 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 MBOAT7Q96N66 472 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 TDRD3Q9H7E2 651 aaKnown RBP15.21■□□□□ 0.03
LIMS1-205ENST00000410093 MAGEC2Q9UBF1 373 aaPredicted RBP15.21■□□□□ 0.03
LIMS1-205ENST00000410093 PCDHA1Q9Y5I3 950 aa15.21■□□□□ 0.03
LIMS1-205ENST00000410093 PHLPP2Q6ZVD8 1323 aa15.21■□□□□ 0.02
LIMS1-205ENST00000410093 A0A1W2PQC6 194 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 KCNJ18B7U540 433 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 RIOK3O14730 519 aaKnown RBP15.2■□□□□ 0.02
LIMS1-205ENST00000410093 N4BP3O15049 544 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 PPP1R11O60927 126 aaPredicted RBP15.2■□□□□ 0.02
LIMS1-205ENST00000410093 RAD17O75943 681 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 BMP3P12645 472 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 CCNE1P24864 410 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 CASP1P29466 404 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 TNNI2P48788 182 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 KCNJ12Q14500 433 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 TTBK2Q6IQ55 1244 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 TC2NQ8N9U0 490 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 STAMQ92783 540 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 PRMT6Q96LA8 375 aaPredicted RBP15.2■□□□□ 0.02
LIMS1-205ENST00000410093 CSRNP1Q96S65 589 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 GMLQ99445 158 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 GOPCQ9HD26 462 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 GINM1Q9NU53 330 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 TMEM260Q9NX78 707 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 ABCB11O95342 1321 aa15.2■□□□□ 0.02
LIMS1-205ENST00000410093 YDJCA8MPS7 323 aa15.19■□□□□ 0.02
LIMS1-205ENST00000410093 MARCH6O60337 910 aa15.19■□□□□ 0.02
LIMS1-205ENST00000410093 FECHP22830 423 aa15.19■□□□□ 0.02
LIMS1-205ENST00000410093 CDC25AP30304 524 aa15.19■□□□□ 0.02
LIMS1-205ENST00000410093 COPB1P53618 953 aaKnown RBP15.19■□□□□ 0.02
LIMS1-205ENST00000410093 STX17P56962 302 aa15.19■□□□□ 0.02
LIMS1-205ENST00000410093 HTRA3P83110 453 aa15.19■□□□□ 0.02
LIMS1-205ENST00000410093 KRT31Q15323 416 aa15.19■□□□□ 0.02
LIMS1-205ENST00000410093 TMEM119Q4V9L6 283 aa15.19■□□□□ 0.02
LIMS1-205ENST00000410093 SYDE2Q5VT97 1194 aa15.19■□□□□ 0.02
LIMS1-205ENST00000410093 USP50Q70EL3 339 aaPredicted RBP15.19■□□□□ 0.02
LIMS1-205ENST00000410093 UNC13DQ70J99 1090 aa15.19■□□□□ 0.02
LIMS1-205ENST00000410093 FBXO11Q86XK2 927 aa15.19■□□□□ 0.02
LIMS1-205ENST00000410093 TMEM139Q8IV31 216 aa15.19■□□□□ 0.02
LIMS1-205ENST00000410093 LARP4BQ92615 738 aaKnown RBP15.19■□□□□ 0.02
LIMS1-205ENST00000410093 MMTAG2Q9BU76 263 aaKnown RBP15.19■□□□□ 0.02
LIMS1-205ENST00000410093 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.19■□□□□ 0.02
LIMS1-205ENST00000410093 BMP2KQ9NSY1 1161 aaPredicted RBP15.19■□□□□ 0.02
LIMS1-205ENST00000410093 PCDHA12Q9UN75 941 aa15.19■□□□□ 0.02
LIMS1-205ENST00000410093 PP2D1A8MPX8 630 aa15.18■□□□□ 0.02
LIMS1-205ENST00000410093 PIK3CDO00329 1044 aa15.18■□□□□ 0.02
LIMS1-205ENST00000410093 EPS15P42566 896 aa15.18■□□□□ 0.02
LIMS1-205ENST00000410093 ETF1P62495 437 aaKnown RBP15.18■□□□□ 0.02
LIMS1-205ENST00000410093 ASIC1P78348 528 aa15.18■□□□□ 0.02
LIMS1-205ENST00000410093 PDE4DQ08499 809 aa15.18■□□□□ 0.02
LIMS1-205ENST00000410093 SPDYE2Q495Y8 402 aa15.18■□□□□ 0.02
LIMS1-205ENST00000410093 CLEC10AQ8IUN9 316 aa15.18■□□□□ 0.02
LIMS1-205ENST00000410093 SIAH1Q8IUQ4 282 aa15.18■□□□□ 0.02
LIMS1-205ENST00000410093 SMYD4Q8IYR2 804 aaPredicted RBP15.18■□□□□ 0.02
LIMS1-205ENST00000410093 RETREG2Q8NC44 543 aa15.18■□□□□ 0.02
LIMS1-205ENST00000410093 RAD54LQ92698 747 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms