RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ZNF76P36508 570 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 SREBF1P36956 1147 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 PRPHP41219 470 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 USP11P51784 963 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 IRX3P78415 501 aaPredicted RBP14.1□□□□□ -0.15
CHMP3-204ENST00000409727 NSMFQ6X4W1 530 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 MCF2L2Q86YR7 1114 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 C2orf69Q8N8R5 385 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 PROCA1Q8NCQ7 364 aaPredicted RBP14.1□□□□□ -0.15
CHMP3-204ENST00000409727 REPS2Q8NFH8 660 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 RASSF8Q8NHQ8 419 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 COL20A1Q9P218 1284 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 SERTAD1Q9UHV2 236 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 ZNF214Q9UL59 606 aaPredicted RBP14.1□□□□□ -0.15
CHMP3-204ENST00000409727 ADAMTS5Q9UNA0 930 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 KCNH4Q9UQ05 1017 aa14.1□□□□□ -0.15
CHMP3-204ENST00000409727 CTAGE5O15320 804 aa14.09□□□□□ -0.15
CHMP3-204ENST00000409727 CCDC192P0DO97 292 aa14.09□□□□□ -0.15
CHMP3-204ENST00000409727 GCFC2P16383 781 aaKnown RBP14.09□□□□□ -0.15
CHMP3-204ENST00000409727 ORC2Q13416 577 aaPredicted RBP14.09□□□□□ -0.15
CHMP3-204ENST00000409727 SASS6Q6UVJ0 657 aa14.09□□□□□ -0.15
CHMP3-204ENST00000409727 SLC30A10Q6XR72 485 aa14.09□□□□□ -0.15
CHMP3-204ENST00000409727 KRBA2Q6ZNG9 492 aa14.09□□□□□ -0.15
CHMP3-204ENST00000409727 CRYGNQ8WXF5 182 aa14.09□□□□□ -0.15
CHMP3-204ENST00000409727 MTMR9Q96QG7 549 aa14.09□□□□□ -0.15
CHMP3-204ENST00000409727 PLIN2Q99541 437 aa14.09□□□□□ -0.15
CHMP3-204ENST00000409727 RBSNQ9H1K0 784 aa14.09□□□□□ -0.15
CHMP3-204ENST00000409727 FAM86B1E9PN63 330 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 FOXN1O15353 648 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 FAM86B2P0C5J1 330 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 TXLNAP40222 546 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 HSD17B4P51659 736 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 RPS6P62753 249 aaKnown RBP14.08□□□□□ -0.16
CHMP3-204ENST00000409727 TYRO3Q06418 890 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 SNAPC2Q13487 334 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 KARSQ15046 597 aaKnown RBP14.08□□□□□ -0.16
CHMP3-204ENST00000409727 RBM43Q6ZSC3 357 aaKnown RBP14.08□□□□□ -0.16
CHMP3-204ENST00000409727 GRAMD1CQ8IYS0 662 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 CYP2W1Q8TAV3 490 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 PURBQ96QR8 312 aaKnown RBP14.08□□□□□ -0.16
CHMP3-204ENST00000409727 NAP1L4Q99733 375 aaKnown RBP14.08□□□□□ -0.16
CHMP3-204ENST00000409727 PAGR1Q9BTK6 254 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 TEX13BQ9BXU2 312 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 ASCC2Q9H1I8 757 aaPredicted RBP14.08□□□□□ -0.16
CHMP3-204ENST00000409727 TTC12Q9H892 705 aaPredicted RBP14.08□□□□□ -0.16
CHMP3-204ENST00000409727 GRPEL1Q9HAV7 217 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 AGTPBP1Q9UPW5 1226 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 LOC285556D6RIA3 1793 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 STAT3P40763 770 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 UBA7P41226 1012 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 OAZ1P54368 228 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 PNOCQ13519 176 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 TMEM266Q2M3C6 531 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 CST9Q5W186 159 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 CHADLQ6NUI6 762 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 POTEEQ6S8J3 1075 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 RNF207Q6ZRF8 634 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 FASTKD5Q7L8L6 764 aaKnown RBP14.08□□□□□ -0.16
CHMP3-204ENST00000409727 HAS1Q92839 578 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 TIGD1Q96MW7 591 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 FUCA2Q9BTY2 467 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 EHMT1Q9H9B1 1298 aa14.08□□□□□ -0.16
CHMP3-204ENST00000409727 POTEMA6NI47 508 aa14.07□□□□□ -0.16
CHMP3-204ENST00000409727 ACTN4O43707 911 aaKnown RBP14.07□□□□□ -0.16
CHMP3-204ENST00000409727 HOXA7P31268 230 aaPredicted RBP14.07□□□□□ -0.16
CHMP3-204ENST00000409727 FKBP1BP68106 108 aa14.07□□□□□ -0.16
CHMP3-204ENST00000409727 MOGSQ13724 837 aa14.07□□□□□ -0.16
CHMP3-204ENST00000409727 SYTL5Q8TDW5 730 aaPredicted RBP14.07□□□□□ -0.16
CHMP3-204ENST00000409727 BTBD7Q9P203 1132 aa14.07□□□□□ -0.16
CHMP3-204ENST00000409727 PNMA2Q9UL42 364 aa14.07□□□□□ -0.16
CHMP3-204ENST00000409727 MYPNQ86TC9 1320 aa14.07□□□□□ -0.16
CHMP3-204ENST00000409727 CYP3A7-CYP3A51PA0A087WV96 503 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 BIN1O00499 593 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 ITGBL1O95965 494 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-204ENST00000409727 CYP3A7P24462 503 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 AFMP43652 599 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 BAATQ14032 418 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-204ENST00000409727 ISM2Q6H9L7 571 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 CEP57L1Q8IYX8 460 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 TAAR1Q96RJ0 339 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 LRWD1Q9UFC0 647 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 CYP3A4P08684 503 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 PRR29P0C7W0 189 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 EIF2AK2P19525 551 aaKnown RBP14.06□□□□□ -0.16
CHMP3-204ENST00000409727 HERVK_113P62684 666 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 GPAT2Q6NUI2 795 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 MOXD1Q6UVY6 613 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 LBX2Q6XYB7 198 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 CABP7Q86V35 215 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 IL31RAQ8NI17 732 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 STAMQ92783 540 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 LENG9Q96B70 501 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 KIAA1468Q9P260 1216 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 PCDHA12Q9UN75 941 aa14.06□□□□□ -0.16
CHMP3-204ENST00000409727 ATP2A1O14983 1001 aa14.05□□□□□ -0.16
CHMP3-204ENST00000409727 OSBPP22059 807 aa14.05□□□□□ -0.16
CHMP3-204ENST00000409727 STAT6P42226 847 aa14.05□□□□□ -0.16
CHMP3-204ENST00000409727 MRE11P49959 708 aa14.05□□□□□ -0.16
CHMP3-204ENST00000409727 FXR2P51116 673 aaKnown RBP eCLIP14.05□□□□□ -0.16
CHMP3-204ENST00000409727 Q4G0T1 1027 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms