RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 RBM47A0AV96 593 aaKnown RBP14.9□□□□□ -0.02
CHRNA1-205ENST00000409542 ICAM1P05362 532 aa14.9□□□□□ -0.02
CHRNA1-205ENST00000409542 NOVP48745 357 aa14.9□□□□□ -0.02
CHRNA1-205ENST00000409542 TAP1Q03518 808 aa14.9□□□□□ -0.02
CHRNA1-205ENST00000409542 ZMYM1Q5SVZ6 1142 aa14.9□□□□□ -0.02
CHRNA1-205ENST00000409542 KHSRPQ92945 711 aaKnown RBP eCLIP14.9□□□□□ -0.02
CHRNA1-205ENST00000409542 FAM122AQ96E09 287 aa14.9□□□□□ -0.02
CHRNA1-205ENST00000409542 NACAP1Q9BZK3 213 aa14.9□□□□□ -0.02
CHRNA1-205ENST00000409542 OSBPL3Q9H4L5 887 aa14.9□□□□□ -0.02
CHRNA1-205ENST00000409542 POLR3EQ9NVU0 708 aa14.9□□□□□ -0.02
CHRNA1-205ENST00000409542 CHMP5Q9NZZ3 219 aa14.9□□□□□ -0.02
CHRNA1-205ENST00000409542 PTPRSQ13332 1948 aa14.9□□□□□ -0.02
CHRNA1-205ENST00000409542 TSPY2A6NKD2 308 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 TLL1O43897 1013 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 SLC30A10Q6XR72 485 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 OR6J1Q8NGC5 347 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 PI4K2BQ8TCG2 481 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 CLEC4DQ8WXI8 215 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 ARNTL2Q8WYA1 636 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 KIF2CQ99661 725 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 PTPDC1A2A3K4 754 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 SLC3A2P08195 630 aaKnown RBP14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 PFKMP08237 780 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 IQCF3P0C7M6 154 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 SUPT20HL2P0C7V6 817 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 CCDC96Q2M329 555 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 FAM47CQ5HY64 1035 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 VPS53Q5VIR6 699 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 TMCO2Q7Z6W1 182 aaPredicted RBP14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 GPATCH3Q96I76 525 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 MTG1Q9BT17 334 aaPredicted RBP14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 LRFN3Q9BTN0 628 aa14.89□□□□□ -0.03
CHRNA1-205ENST00000409542 FRMPD2Q68DX3 1309 aaPredicted RBP14.88□□□□□ -0.03
CHRNA1-205ENST00000409542 TRIP12Q14669 1992 aaPredicted RBP14.88□□□□□ -0.03
CHRNA1-205ENST00000409542 RANBP6O60518 1105 aaKnown RBP14.88□□□□□ -0.03
CHRNA1-205ENST00000409542 LPXNO60711 386 aa14.88□□□□□ -0.03
CHRNA1-205ENST00000409542 CALML3P27482 149 aa14.88□□□□□ -0.03
CHRNA1-205ENST00000409542 CPT1AP50416 773 aa14.88□□□□□ -0.03
CHRNA1-205ENST00000409542 GPNMBQ14956 572 aa14.88□□□□□ -0.03
CHRNA1-205ENST00000409542 SYDE2Q5VT97 1194 aa14.88□□□□□ -0.03
CHRNA1-205ENST00000409542 BTNL9Q6UXG8 535 aa14.88□□□□□ -0.03
CHRNA1-205ENST00000409542 HERC6Q8IVU3 1022 aa14.88□□□□□ -0.03
CHRNA1-205ENST00000409542 FSD1Q9BTV5 496 aa14.88□□□□□ -0.03
CHRNA1-205ENST00000409542 LCHNA4D1U4 455 aa14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 GTPBP6O43824 516 aaPredicted RBP14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 ARIH2O95376 493 aa14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 DDIT3P35638 169 aa14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 GRB10Q13322 594 aa14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 AAK1Q2M2I8 961 aa14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 CASC1Q6TDU7 716 aa14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 PHOSPHO2Q8TCD6 241 aa14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 DCAF4Q8WV16 495 aa14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 CTAGE1Q96RT6 745 aa14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 SLC9A7Q96T83 725 aa14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 C1QTNF1Q9BXJ1 281 aa14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 FTOQ9C0B1 505 aaKnown RBP eCLIP14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 GPCPD1Q9NPB8 672 aa14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 ADD3Q9UEY8 706 aaKnown RBP14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 CIZ1Q9ULV3 898 aaPredicted RBP14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 TANC1Q9C0D5 1861 aa14.87□□□□□ -0.03
CHRNA1-205ENST00000409542 ACTN1P12814 892 aa14.86□□□□□ -0.03
CHRNA1-205ENST00000409542 KCNA4P22459 653 aa14.86□□□□□ -0.03
CHRNA1-205ENST00000409542 TCTN1Q2MV58 587 aa14.86□□□□□ -0.03
CHRNA1-205ENST00000409542 TMEM47Q9BQJ4 181 aa14.86□□□□□ -0.03
CHRNA1-205ENST00000409542 GPHNQ9NQX3 736 aaPredicted RBP14.86□□□□□ -0.03
CHRNA1-205ENST00000409542 SALL3Q9BXA9 1300 aa14.86□□□□□ -0.03
CHRNA1-205ENST00000409542 COL4A4P53420 1690 aaPredicted RBP14.85□□□□□ -0.03
CHRNA1-205ENST00000409542 A6NJR5 290 aa14.85□□□□□ -0.03
CHRNA1-205ENST00000409542 SDSP20132 328 aa14.85□□□□□ -0.03
CHRNA1-205ENST00000409542 EDNRBP24530 442 aa14.85□□□□□ -0.03
CHRNA1-205ENST00000409542 HOXD11P31277 338 aaPredicted RBP14.85□□□□□ -0.03
CHRNA1-205ENST00000409542 RFC2P35250 354 aa14.85□□□□□ -0.03
CHRNA1-205ENST00000409542 RPS6P62753 249 aaKnown RBP14.85□□□□□ -0.03
CHRNA1-205ENST00000409542 NFRKBQ6P4R8 1299 aa14.85□□□□□ -0.03
CHRNA1-205ENST00000409542 RNF207Q6ZRF8 634 aa14.85□□□□□ -0.03
CHRNA1-205ENST00000409542 RETREG2Q8NC44 543 aa14.85□□□□□ -0.03
CHRNA1-205ENST00000409542 CD320Q9NPF0 282 aa14.85□□□□□ -0.03
CHRNA1-205ENST00000409542 C11orf16Q9NQ32 467 aa14.85□□□□□ -0.03
CHRNA1-205ENST00000409542 ANAPC4Q9UJX5 808 aa14.85□□□□□ -0.03
CHRNA1-205ENST00000409542 COG5Q9UP83 839 aa14.85□□□□□ -0.03
CHRNA1-205ENST00000409542 TTC41PQ6P2S7 1318 aa14.85□□□□□ -0.03
CHRNA1-205ENST00000409542 PITPNM1O00562 1244 aa14.84□□□□□ -0.03
CHRNA1-205ENST00000409542 ORC4O43929 436 aa14.84□□□□□ -0.03
CHRNA1-205ENST00000409542 FGRP09769 529 aa14.84□□□□□ -0.03
CHRNA1-205ENST00000409542 PDE1AP54750 535 aa14.84□□□□□ -0.03
CHRNA1-205ENST00000409542 CHMP4BP1P59074 171 aa14.84□□□□□ -0.03
CHRNA1-205ENST00000409542 PPP2R5BQ15173 497 aa14.84□□□□□ -0.03
CHRNA1-205ENST00000409542 LRRFIP1Q32MZ4 808 aaKnown RBP14.84□□□□□ -0.03
CHRNA1-205ENST00000409542 PPP4R3BQ5MIZ7 849 aa14.84□□□□□ -0.03
CHRNA1-205ENST00000409542 DHX38Q92620 1227 aaKnown RBP14.84□□□□□ -0.03
CHRNA1-205ENST00000409542 HLA-CQ95604 372 aa14.84□□□□□ -0.03
CHRNA1-205ENST00000409542 LOC102724159A0A0B4J2E5 919 aa14.83□□□□□ -0.03
CHRNA1-205ENST00000409542 TXNP10599 105 aaKnown RBP14.83□□□□□ -0.03
CHRNA1-205ENST00000409542 DEFB103AP81534 67 aa14.83□□□□□ -0.03
CHRNA1-205ENST00000409542 PDE4DQ08499 809 aa14.83□□□□□ -0.03
CHRNA1-205ENST00000409542 PWP2Q15269 919 aaKnown RBP14.83□□□□□ -0.03
CHRNA1-205ENST00000409542 RABEP1Q15276 862 aa14.83□□□□□ -0.03
CHRNA1-205ENST00000409542 RRP12Q5JTH9 1297 aaKnown RBP14.83□□□□□ -0.03
CHRNA1-205ENST00000409542 GDF6Q6KF10 455 aaPredicted RBP14.83□□□□□ -0.03
CHRNA1-205ENST00000409542 TBC1D5Q92609 795 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms