RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 DLC1Q96QB1 1528 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 MADDQ8WXG6 1647 aa5.52□□□□□ -1.53
SCN3A-203ENST00000409101 SYNJ2BP-COX16A0A087WUM0 186 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 SHTN1A0MZ66 631 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 FAM196BA6NMK8 535 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 PRDX5P30044 214 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 TNFAIP2Q03169 654 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 CALCOCO2Q13137 446 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 AP3B2Q13367 1082 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 SFMBT2Q5VUG0 894 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 BBS5Q8N3I7 341 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 STAG1Q8WVM7 1258 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 NLRP4Q96MN2 994 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 KATNAL1Q9BW62 490 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 ZNF302Q9NR11 478 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 COX16Q9P0S2 106 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 MYO1AQ9UBC5 1043 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 NRKQ7Z2Y5 1582 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 FER1L4A9Z1Z3 1794 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 QRICH2Q9H0J4 1663 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 CTAGE15A4D2H0 777 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 CTAGE9A4FU28 777 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 AKR1B15C9JRZ8 316 aaPredicted RBP5.51□□□□□ -1.53
SCN3A-203ENST00000409101 JAK2O60674 1132 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 CAPN15O75808 1086 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 CTAGE8P0CG41 777 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 SRGAP2BP0DMP2 458 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 VEGFAP15692 232 aaPredicted RBP5.51□□□□□ -1.53
SCN3A-203ENST00000409101 CYP2B6P20813 491 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 MCAMP43121 646 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 PHKA2P46019 1235 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 SURF1Q15526 300 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 HADHQ16836 314 aaKnown RBP5.51□□□□□ -1.53
SCN3A-203ENST00000409101 KCNV1Q6PIU1 500 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 CTAGE6Q86UF2 777 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 CEP57Q86XR8 500 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 CTAGE4Q8IX94 777 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 ANKRD13AQ8IZ07 590 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 MLKLQ8NB16 471 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 SMC1BQ8NDV3 1235 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 AGBL3Q8NEM8 1001 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 TBC1D31Q96DN5 1066 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 MTRF1LQ9UGC7 380 aaKnown RBP5.51□□□□□ -1.53
SCN3A-203ENST00000409101 RARBP10826 455 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 ACTN1P12814 892 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 KCNA4P22459 653 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 SLC9C1Q4G0N8 1177 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 ADALQ6DHV7 355 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 GPR161Q8N6U8 529 aaKnown RBP5.51□□□□□ -1.53
SCN3A-203ENST00000409101 ZNF280CQ8ND82 737 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 TBCKQ8TEA7 893 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 ATP6V0A4Q9HBG4 840 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 SERTAD1Q9UHV2 236 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 USP42Q9H9J4 1324 aaKnown RBP5.51□□□□□ -1.53
SCN3A-203ENST00000409101 PPRC1Q5VV67 1664 aaKnown RBP5.51□□□□□ -1.53
SCN3A-203ENST00000409101 CYP2D6P10635 497 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 CUL4BQ13620 913 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 PPP2R5DQ14738 602 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 CTR9Q6PD62 1173 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 GPRC5AQ8NFJ5 357 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 CCDC127Q96BQ5 260 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 NUDT12Q9BQG2 462 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 RNF26Q9BY78 433 aaPredicted RBP5.51□□□□□ -1.53
SCN3A-203ENST00000409101 TMEM206Q9H813 350 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 MAGEF1Q9HAY2 307 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 LMCD1Q9NZU5 365 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 ZBTB12Q9Y330 459 aaPredicted RBP5.51□□□□□ -1.53
SCN3A-203ENST00000409101 ADD1P35611 737 aaKnown RBP5.51□□□□□ -1.53
SCN3A-203ENST00000409101 MYL7Q01449 175 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 BFSP1Q12934 665 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 TWF2Q6IBS0 349 aaKnown RBP5.51□□□□□ -1.53
SCN3A-203ENST00000409101 RAB20Q9NX57 234 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 SEPT10Q9P0V9 454 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 IFNKQ9P0W0 207 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 PCDHB4Q9Y5E5 795 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 ZBTB5O15062 677 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 PFDN6O15212 129 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 ZNF853P0CG23 659 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 ERCC3P19447 782 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 NLRP12P59046 1061 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 OSTNP61366 133 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 RASSF7Q02833 373 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 ITIH3Q06033 890 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 ITPK1Q13572 414 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 GEN1Q17RS7 908 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 HS1BP3Q53T59 392 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 PRPF38AQ8NAV1 312 aaKnown RBP5.51□□□□□ -1.53
SCN3A-203ENST00000409101 PCDHA6Q9UN73 950 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 PCDHA8Q9Y5H6 950 aa5.51□□□□□ -1.53
SCN3A-203ENST00000409101 ZNF202O95125 648 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 TRAPPC10P48553 1259 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 MFAP3P55082 362 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 PPP2R3AQ06190 1150 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 GOLGA8FQ08AF8 430 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 GOLGA8DPQ0D2H9 430 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 PLCB4Q15147 1175 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 CYP26C1Q6V0L0 522 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 GBP6Q6ZN66 633 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 C4orf50Q6ZRC1 276 aa5.5□□□□□ -1.53
SCN3A-203ENST00000409101 SRGAP1Q7Z6B7 1085 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms