RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 DCUN1D2Q6PH85 259 aa11.14□□□□□ -0.63
KDM3A-202ENST00000409064 CATSPER4Q7RTX7 472 aa11.14□□□□□ -0.63
KDM3A-202ENST00000409064 FBXO18Q8NFZ0 1043 aa11.14□□□□□ -0.63
KDM3A-202ENST00000409064 IFNKQ9P0W0 207 aa11.14□□□□□ -0.63
KDM3A-202ENST00000409064 TMEM131LA2VDJ0 1609 aa11.14□□□□□ -0.63
KDM3A-202ENST00000409064 SALL3Q9BXA9 1300 aa11.14□□□□□ -0.63
KDM3A-202ENST00000409064 PSAPP07602 524 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 GCFC2P16383 781 aaKnown RBP11.13□□□□□ -0.63
KDM3A-202ENST00000409064 GTF2F1P35269 517 aaKnown RBP eCLIP11.13□□□□□ -0.636e-9■■■■■ 33
KDM3A-202ENST00000409064 PRPHP41219 470 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 PAK1Q13153 545 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 GSTA5Q7RTV2 222 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 PLA2G12BQ9BX93 195 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 NAA15Q9BXJ9 866 aaKnown RBP11.13□□□□□ -0.63
KDM3A-202ENST00000409064 MKRN1Q9UHC7 482 aaKnown RBP11.13□□□□□ -0.63
KDM3A-202ENST00000409064 FAM170AA1A519 330 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 MEIS1O00470 390 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 ENTPD3O75355 529 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 CDC25BP30305 580 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 OSTNP61366 133 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 ARHGAP44Q17R89 818 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 USP17L6PQ6QN14 398 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 HHIPL2Q6UWX4 724 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 FMNL3Q8IVF7 1028 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 LRRC8AQ8IWT6 810 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 MAK16Q9BXY0 300 aaKnown RBP11.13□□□□□ -0.63
KDM3A-202ENST00000409064 ADALQ6DHV7 355 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 IMPACTQ9P2X3 320 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 DNAI1Q9UI46 699 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 POLIQ9UNA4 740 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 FER1L4A9Z1Z3 1794 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 ZBTB5O15062 677 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 SCRN1Q12765 414 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 MYOCDQ8IZQ8 938 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 ZSWIM4Q9H7M6 989 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 SERTAD1Q9UHV2 236 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 INPP5FQ9Y2H2 1132 aa11.13□□□□□ -0.63
KDM3A-202ENST00000409064 TLR3O15455 904 aaKnown RBP11.12□□□□□ -0.63
KDM3A-202ENST00000409064 CTR9Q6PD62 1173 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 SYT10Q6XYQ8 523 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 ZBTB33Q86T24 672 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 IL25Q9H293 177 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 HESX1Q9UBX0 185 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 C19orf81C9J6K1 198 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 CAPN9O14815 690 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 ELF1P32519 619 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 LIFRP42702 1097 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 MTMR1Q13613 665 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 POSTNQ15063 836 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 KMT5BQ4FZB7 885 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 LMBR1Q8WVP7 490 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 TEX13BQ9BXU2 312 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 SLITRK6Q9H5Y7 841 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 POLLQ9UGP5 575 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 SERPINA10Q9UK55 444 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 IKBKGQ9Y6K9 419 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 NRKQ7Z2Y5 1582 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 hCG_1984214I3L0E3 225 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 SH2B2O14492 632 aaPredicted RBP11.12□□□□□ -0.63
KDM3A-202ENST00000409064 CSF1RP07333 972 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 NR5A1Q13285 461 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 FAM26FQ5R3K3 315 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 ZNF713Q8N859 430 aaPredicted RBP11.12□□□□□ -0.63
KDM3A-202ENST00000409064 EHBP1Q8NDI1 1231 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 USP28Q96RU2 1077 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 CRACR2AQ9BSW2 395 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 SRRTQ9BXP5 876 aaKnown RBP11.12□□□□□ -0.63
KDM3A-202ENST00000409064 MTIF3Q9H2K0 278 aaKnown RBP11.12□□□□□ -0.63
KDM3A-202ENST00000409064 KMT5AQ9NQR1 393 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 PANK4Q9NVE7 773 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 IFNAR1P17181 557 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 ATG9AQ7Z3C6 839 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 CLEC10AQ8IUN9 316 aa11.12□□□□□ -0.63
KDM3A-202ENST00000409064 CACTINQ8WUQ7 758 aaKnown RBP11.12□□□□□ -0.63
KDM3A-202ENST00000409064 ZKSCAN4Q969J2 545 aaPredicted RBP11.12□□□□□ -0.63
KDM3A-202ENST00000409064 PRMT6Q96LA8 375 aaPredicted RBP11.12□□□□□ -0.63
KDM3A-202ENST00000409064 PXDNLA1KZ92 1463 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 KBTBD13C9JR72 458 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 DYNC1LI2O43237 492 aaPredicted RBP11.11□□□□□ -0.63
KDM3A-202ENST00000409064 SPOPO43791 374 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 PLEKHA8P1O95397 391 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 FDX1P10109 184 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 RABL6Q3YEC7 729 aaPredicted RBP11.11□□□□□ -0.63
KDM3A-202ENST00000409064 NBPF11Q86T75 865 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 EEF2KMTQ96G04 330 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 RNF216Q9NWF9 866 aaPredicted RBP11.11□□□□□ -0.63
KDM3A-202ENST00000409064 TTLL3Q9Y4R7 772 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 ASB14A6NK59 587 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 TACC1O75410 805 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 COPB2P35606 906 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 KARSQ15046 597 aaKnown RBP11.11□□□□□ -0.63
KDM3A-202ENST00000409064 ELF2Q15723 593 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 RSRC2Q7L4I2 434 aaKnown RBP11.11□□□□□ -0.63
KDM3A-202ENST00000409064 PTF1AQ7RTS3 328 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 DYDC1Q8WWB3 177 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 STIM2Q9P246 746 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 POLR3GO15318 223 aaPredicted RBP11.11□□□□□ -0.63
KDM3A-202ENST00000409064 XRCC5P13010 732 aaKnown RBP11.11□□□□□ -0.63
KDM3A-202ENST00000409064 CDC25AP30304 524 aa11.11□□□□□ -0.63
KDM3A-202ENST00000409064 YWHAEP62258 255 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms