RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 TAPT1Q6NXT6 567 aa11.99□□□□□ -0.49
FAM49A-202ENST00000406434 CMTR1Q8N1G2 835 aaKnown RBP11.99□□□□□ -0.49
FAM49A-202ENST00000406434 CCDC82Q8N4S0 544 aa11.99□□□□□ -0.49
FAM49A-202ENST00000406434 MTMR8Q96EF0 704 aa11.99□□□□□ -0.49
FAM49A-202ENST00000406434 MAP3K14Q99558 947 aa11.99□□□□□ -0.49
FAM49A-202ENST00000406434 AP5M1Q9H0R1 490 aa11.99□□□□□ -0.49
FAM49A-202ENST00000406434 VTA1Q9NP79 307 aa11.99□□□□□ -0.49
FAM49A-202ENST00000406434 PCDH10Q9P2E7 1040 aa11.99□□□□□ -0.49
FAM49A-202ENST00000406434 NAP1L2Q9ULW6 460 aaPredicted RBP11.99□□□□□ -0.49
FAM49A-202ENST00000406434 SYNRGQ9UMZ2 1314 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 ADAMTS4O75173 837 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 CALM1P0DP23 149 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 CALM2P0DP24 149 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 CALM3P0DP25 149 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 SMPD1P17405 629 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 PTGS1P23219 599 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 ACLYP53396 1101 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 RTP1P59025 263 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 BEX3Q00994 111 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 EXOSC10Q01780 885 aaKnown RBP11.98□□□□□ -0.49
FAM49A-202ENST00000406434 TRAF1Q13077 416 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 TMEM63BQ5T3F8 832 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 ARHGEF16Q5VV41 709 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 SRBD1Q8N5C6 995 aaKnown RBP11.98□□□□□ -0.49
FAM49A-202ENST00000406434 FANCBQ8NB91 859 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 KLHDC9Q8NEP7 349 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 DNERQ8NFT8 737 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 SYTL5Q8TDW5 730 aaPredicted RBP11.98□□□□□ -0.49
FAM49A-202ENST00000406434 MORC4Q8TE76 937 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 RRP36Q96EU6 259 aaKnown RBP11.98□□□□□ -0.49
FAM49A-202ENST00000406434 JAKMIP1Q96N16 626 aaKnown RBP11.98□□□□□ -0.49
FAM49A-202ENST00000406434 RMDN3Q96TC7 470 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 TSEN34Q9BSV6 310 aaKnown RBP11.98□□□□□ -0.49
FAM49A-202ENST00000406434 WDR11Q9BZH6 1224 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 PHF24Q9UPV7 400 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 LCTP09848 1927 aa11.98□□□□□ -0.49
FAM49A-202ENST00000406434 A0A1W2PQ45 241 aaPredicted RBP11.97□□□□□ -0.49
FAM49A-202ENST00000406434 A0A1W2PQY0 241 aa11.97□□□□□ -0.49
FAM49A-202ENST00000406434 PLEKHA8P1O95397 391 aa11.97□□□□□ -0.49
FAM49A-202ENST00000406434 HMGB1P09429 215 aaKnown RBP11.97□□□□□ -0.49
FAM49A-202ENST00000406434 PRKCSHP14314 528 aaPredicted RBP11.97□□□□□ -0.49
FAM49A-202ENST00000406434 EIF2AK2P19525 551 aaKnown RBP11.97□□□□□ -0.49
FAM49A-202ENST00000406434 HOXA13P31271 388 aaPredicted RBP11.97□□□□□ -0.49
FAM49A-202ENST00000406434 HSPA4P34932 840 aa11.97□□□□□ -0.49
FAM49A-202ENST00000406434 GJA9P57773 515 aa11.97□□□□□ -0.49
FAM49A-202ENST00000406434 TRIM60Q495X7 471 aa11.97□□□□□ -0.49
FAM49A-202ENST00000406434 TLK2Q86UE8 772 aa11.97□□□□□ -0.49
FAM49A-202ENST00000406434 FCHSD1Q86WN1 690 aa11.97□□□□□ -0.49
FAM49A-202ENST00000406434 MICU3Q86XE3 530 aa11.97□□□□□ -0.49
FAM49A-202ENST00000406434 PCSK9Q8NBP7 692 aaKnown RBP11.97□□□□□ -0.49
FAM49A-202ENST00000406434 NSUN6Q8TEA1 469 aaKnown RBP11.97□□□□□ -0.49
FAM49A-202ENST00000406434 LZTS2Q9BRK4 669 aa11.97□□□□□ -0.49
FAM49A-202ENST00000406434 COL20A1Q9P218 1284 aa11.97□□□□□ -0.49
FAM49A-202ENST00000406434 SEC63Q9UGP8 760 aaKnown RBP11.97□□□□□ -0.49
FAM49A-202ENST00000406434 SNX14Q9Y5W7 946 aa11.97□□□□□ -0.49
FAM49A-202ENST00000406434 DNAH12Q6ZR08 3092 aa11.97□□□□□ -0.49
FAM49A-202ENST00000406434 LOC102724159A0A0B4J2E5 919 aa11.96□□□□□ -0.49
FAM49A-202ENST00000406434 hCG_1642624A0A1W2PR95 340 aa11.96□□□□□ -0.49
FAM49A-202ENST00000406434 GCOM1H8Y6P7 765 aaPredicted RBP11.96□□□□□ -0.49
FAM49A-202ENST00000406434 ASGR1P07306 291 aa11.96□□□□□ -0.49
FAM49A-202ENST00000406434 POLR2MP0CAP2 368 aa11.96□□□□□ -0.49
FAM49A-202ENST00000406434 MYCLP12524 364 aaPredicted RBP11.96□□□□□ -0.49
FAM49A-202ENST00000406434 CLCN6P51797 869 aa11.96□□□□□ -0.49
FAM49A-202ENST00000406434 PWP2Q15269 919 aaKnown RBP11.96□□□□□ -0.49
FAM49A-202ENST00000406434 HABP4Q5JVS0 413 aaKnown RBP11.96□□□□□ -0.49
FAM49A-202ENST00000406434 BLOC1S2Q6QNY1 142 aa11.96□□□□□ -0.49
FAM49A-202ENST00000406434 SEPT14Q6ZU15 432 aa11.96□□□□□ -0.49
FAM49A-202ENST00000406434 KCNB2Q92953 911 aa11.96□□□□□ -0.49
FAM49A-202ENST00000406434 GLT1D1Q96MS3 346 aa11.96□□□□□ -0.49
FAM49A-202ENST00000406434 SPZ1Q9BXG8 430 aa11.96□□□□□ -0.49
FAM49A-202ENST00000406434 UPF3AQ9H1J1 476 aaKnown RBP11.96□□□□□ -0.49
FAM49A-202ENST00000406434 PRDM5Q9NQX1 630 aaPredicted RBP11.96□□□□□ -0.49
FAM49A-202ENST00000406434 STARD7Q9NQZ5 370 aa11.96□□□□□ -0.49
FAM49A-202ENST00000406434 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.49
FAM49A-202ENST00000406434 PRKAG2Q9UGJ0 569 aa11.96□□□□□ -0.49
FAM49A-202ENST00000406434 BRPF3Q9ULD4 1205 aa11.96□□□□□ -0.49
FAM49A-202ENST00000406434 GNEQ9Y223 722 aaKnown RBP11.96□□□□□ -0.49
FAM49A-202ENST00000406434 KLF18A0A0U1RQI7 1052 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 MOXD2PA6NHM9 499 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 OPLAHO14841 1288 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 ZBTB43O43298 467 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 ZEB2O60315 1214 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 PQBP1O60828 265 aaKnown RBP11.95□□□□□ -0.5
FAM49A-202ENST00000406434 TXNP10599 105 aaKnown RBP11.95□□□□□ -0.5
FAM49A-202ENST00000406434 SMARCA1P28370 1054 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 HSD17B4P51659 736 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 MDM2Q00987 491 aaPredicted RBP11.95□□□□□ -0.5
FAM49A-202ENST00000406434 TLE2Q04725 743 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 NBR1Q14596 966 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 STXBP2Q15833 593 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 FSCN1Q16658 493 aaKnown RBP11.95□□□□□ -0.5
FAM49A-202ENST00000406434 DUSP28Q4G0W2 176 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 CCSAPQ6IQ19 270 aaPredicted RBP11.95□□□□□ -0.5
FAM49A-202ENST00000406434 Q6ZUG5 572 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 SGMS1Q86VZ5 419 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 IWS1Q96ST2 819 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 USP26Q9BXU7 913 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 MAF1Q9H063 256 aa11.95□□□□□ -0.5
FAM49A-202ENST00000406434 NR3C2P08235 984 aa11.94□□□□□ -0.5
FAM49A-202ENST00000406434 CASTP20810 708 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms