RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 NPHS1O60500 1241 aa7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 RFPL3O75679 317 aa7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 CRTAMO95727 393 aa7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 HPXP02790 462 aa7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 MSL3P1P0C860 447 aa7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 GPR85P60893 370 aa7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 RSPO2Q6UXX9 243 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 MTDHQ86UE4 582 aaKnown RBP7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 NLRP10Q86W26 655 aa7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 NIM1KQ8IY84 436 aa7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 IFNL3Q8IZI9 196 aa7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 OXR1Q8N573 874 aa7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 SLKQ9H2G2 1235 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 ZFP64Q9NPA5 681 aa7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 FBLN5Q9UBX5 448 aa7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 RWDD3Q9Y3V2 267 aa7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 OAS3Q9Y6K5 1087 aaKnown RBP7.14□□□□□ -1.27
HMGB3P19-201ENST00000403971 BAZ1BQ9UIG0 1483 aaKnown RBP7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 FITM1A5D6W6 292 aa7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 KCNQ2O43526 872 aa7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 NRDCO43847 1150 aa7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 EFCAB14O75071 495 aa7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 FPR2P25090 351 aa7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 TACR1P25103 407 aa7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 GUCY1A3Q02108 690 aa7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 CHRNEQ04844 493 aa7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 LBX2Q6XYB7 198 aa7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 SPPL2CQ8IUH8 684 aa7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 CCDC120Q96HB5 630 aa7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 CHAMP1Q96JM3 812 aa7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 MARCH2Q9P0N8 246 aa7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 TIMM13Q9Y5L4 95 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 TAF6LQ9Y6J9 622 aa7.13□□□□□ -1.27
HMGB3P19-201ENST00000403971 WTIPA6NIX2 430 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 AQP7O14520 342 aa7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 PRKCAP17252 672 aa7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 RPL11P62913 178 aaKnown RBP7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 MVKQ03426 396 aa7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 ZNF460Q14592 562 aa7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 TEX2Q8IWB9 1127 aa7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 SIRT2Q8IXJ6 389 aa7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 NUP43Q8NFH3 380 aa7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 MFSD3Q96ES6 412 aa7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 MAGEB10Q96LZ2 347 aaPredicted RBP7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 ZFYVE21Q9BQ24 234 aa7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 GPR160Q9UJ42 338 aa7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 PLAAQ9Y263 795 aa7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 TNPO3Q9Y5L0 923 aaKnown RBP7.12□□□□□ -1.27
HMGB3P19-201ENST00000403971 A0A1W2PQ27 194 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 A0A1W2PQ64 194 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 A0A1W2PQC6 194 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 A0A1W2PQD8 194 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 TCRBV16S1A1N1A0A5B0 115 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 ANKRD62A6NC57 917 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 MYO1BO43795 1136 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 FUCA1P04066 466 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 NR0B2Q15466 257 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 TM4SF20Q53R12 229 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 FYB2Q5VWT5 728 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 GALNT18Q6P9A2 607 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 CEP68Q76N32 757 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 MYLIPQ8WY64 445 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 SHISA4Q96DD7 197 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 ASIC4Q96FT7 647 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 MTA3Q9BTC8 594 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 CDIP1Q9H305 208 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 CLDND1Q9NY35 253 aa7.11□□□□□ -1.27
HMGB3P19-201ENST00000403971 SRGAP2CP0DJJ0 459 aa7.1□□□□□ -1.27
HMGB3P19-201ENST00000403971 MYCLP1P12525 358 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P19-201ENST00000403971 CANXP27824 592 aaKnown RBP7.1□□□□□ -1.27
HMGB3P19-201ENST00000403971 MASP1P48740 699 aa7.1□□□□□ -1.27
HMGB3P19-201ENST00000403971 LSAMPQ13449 338 aa7.1□□□□□ -1.27
HMGB3P19-201ENST00000403971 CNNM4Q6P4Q7 775 aa7.1□□□□□ -1.27
HMGB3P19-201ENST00000403971 ABHD17CQ6PCB6 329 aa7.1□□□□□ -1.27
HMGB3P19-201ENST00000403971 NLRX1Q86UT6 975 aa7.1□□□□□ -1.27
HMGB3P19-201ENST00000403971 PLEKHO2Q8TD55 490 aa7.1□□□□□ -1.27
HMGB3P19-201ENST00000403971 JAM3Q9BX67 310 aa7.1□□□□□ -1.27
HMGB3P19-201ENST00000403971 IPPKQ9H8X2 491 aa7.1□□□□□ -1.27
HMGB3P19-201ENST00000403971 ACSL6Q9UKU0 697 aa7.1□□□□□ -1.27
HMGB3P19-201ENST00000403971 A0A087X0B3 334 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 FAM83GA6ND36 823 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 ARVCFO00192 962 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 OPA1O60313 960 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 SOD2P04179 222 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 RAC2P15153 192 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 KCNA6P17658 529 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 KIZQ2M2Z5 673 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 FILIP1Q7Z7B0 1213 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 LRRTM3Q86VH5 581 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 LZTR1Q8N653 840 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 FLAD1Q8NFF5 587 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 NLGN2Q8NFZ4 835 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 PCDH19Q8TAB3 1148 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 TRMT2BQ96GJ1 504 aaKnown RBP7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 TMEM169Q96HH4 297 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 KCNJ15Q99712 375 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 TARS2Q9BW92 718 aaKnown RBP7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 RNF32Q9H0A6 362 aa7.09□□□□□ -1.27
HMGB3P19-201ENST00000403971 MAGEC2Q9UBF1 373 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms