RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 RPS6KA5O75582 802 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 RHBDL3P58872 404 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 GSTO1P78417 241 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 AMPD2Q01433 879 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 MCTP2Q6DN12 878 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 ANKS1AQ92625 1134 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 LACRTQ9GZZ8 138 aa15.7■□□□□ 0.1
ATG3-202ENST00000402314 RCCD1A6NED2 376 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 SERPINB2P05120 415 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 TXKP42681 527 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 GNAQP50148 359 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 SF3A3Q12874 501 aaKnown RBP eCLIP15.69■□□□□ 0.1
ATG3-202ENST00000402314 STK4Q13043 487 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 CYP26C1Q6V0L0 522 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 CABP7Q86V35 215 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 POTEDQ86YR6 584 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 TBCKQ8TEA7 893 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 JAKMIP2Q96AA8 810 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 GPCPD1Q9NPB8 672 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 GGA1Q9UJY5 639 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 SNED1Q8TER0 1413 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 NDUFA10O95299 355 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 LDHCP07864 332 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 TMTC1Q8IUR5 882 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 SH3GLB2Q9NR46 395 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 DLEC1Q9Y238 1755 aa15.69■□□□□ 0.1
ATG3-202ENST00000402314 LRRC10BA6NIK2 292 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 B4DLN1 442 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 GYS1P13807 737 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 KCNV1Q6PIU1 500 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 PCMTD1Q96MG8 357 aaPredicted RBP15.68■□□□□ 0.1
ATG3-202ENST00000402314 BTAF1O14981 1849 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 INPP5BP32019 993 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 CT47A1Q5JQC4 288 aaPredicted RBP15.68■□□□□ 0.1
ATG3-202ENST00000402314 ARL8AQ96BM9 186 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 NAA15Q9BXJ9 866 aaKnown RBP15.68■□□□□ 0.1
ATG3-202ENST00000402314 CAPS2Q9BXY5 557 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 DMGDHQ9UI17 866 aaKnown RBP15.68■□□□□ 0.1
ATG3-202ENST00000402314 LTBP4Q8N2S1 1624 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 GPR75-ASB3A0A0A6YYF3 556 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 RAD21O60216 631 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 SCNN1DP51172 638 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 ASIC1P78348 528 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 C16orf86Q6ZW13 317 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 TBC1D16Q8TBP0 767 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 KBTBD4Q9NVX7 518 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 RMND1Q9NWS8 449 aa15.68■□□□□ 0.1
ATG3-202ENST00000402314 CCDC88AQ3V6T2 1871 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 OR52Z1P0C646 297 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 IDEP14735 1019 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 PDE4DQ08499 809 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 KRT26Q7Z3Y9 468 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 ANKRD13CQ8N6S4 541 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 NEDD1Q8NHV4 660 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 ZMYND12Q9H0C1 365 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 YY1AP1Q9H869 796 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 LAMB1P07942 1786 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 TDP2O95551 362 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 AKR1B1P15121 316 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 SLC16A2P36021 539 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 NONOQ15233 471 aaKnown RBP eCLIP15.67■□□□□ 0.1
ATG3-202ENST00000402314 RNF187Q5TA31 235 aaPredicted RBP15.67■□□□□ 0.1
ATG3-202ENST00000402314 DYMQ7RTS9 669 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 SLC39A2Q9NP94 309 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 DDX4Q9NQI0 724 aaKnown RBP15.67■□□□□ 0.1
ATG3-202ENST00000402314 AGPAT5Q9NUQ2 364 aa15.67■□□□□ 0.1
ATG3-202ENST00000402314 ROBO3Q96MS0 1386 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 ZC3H4Q9UPT8 1303 aaKnown RBP15.66■□□□□ 0.1
ATG3-202ENST00000402314 SSBP05455 408 aaKnown RBP eCLIP15.66■□□□□ 0.1
ATG3-202ENST00000402314 MAP2K2P36507 400 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 RNASE9P60153 205 aaKnown RBP15.66■□□□□ 0.1
ATG3-202ENST00000402314 DDR1Q08345 913 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 SHROOM1Q2M3G4 852 aaPredicted RBP15.66■□□□□ 0.1
ATG3-202ENST00000402314 ANKRD40Q6AI12 368 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 TTBK2Q6IQ55 1244 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 TRAPPC11Q7Z392 1133 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 FNBP4Q8N3X1 1017 aaPredicted RBP15.66■□□□□ 0.1
ATG3-202ENST00000402314 CSGALNACT2Q8N6G5 542 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 ANKRD20A12PQ8NF67 263 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 DUSP9Q99956 384 aaKnown RBP15.66■□□□□ 0.1
ATG3-202ENST00000402314 NUDT12Q9BQG2 462 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 LRRC1Q9BTT6 524 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 MMTAG2Q9BU76 263 aaKnown RBP15.66■□□□□ 0.1
ATG3-202ENST00000402314 CXorf56Q9H5V9 222 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 CD248Q9HCU0 757 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 TCP11L1Q9NUJ3 509 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 SEC63Q9UGP8 760 aaKnown RBP15.66■□□□□ 0.1
ATG3-202ENST00000402314 DAGLAQ9Y4D2 1042 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 SRCAPQ6ZRS2 3230 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 POTEMA6NI47 508 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 FAM196BA6NMK8 535 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 NDUFAB1O14561 156 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 MYCNP04198 464 aaPredicted RBP15.66■□□□□ 0.1
ATG3-202ENST00000402314 UBE2SQ16763 222 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 DOK7Q18PE1 504 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 SOGA3Q5TF21 947 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 WDR93Q6P2C0 686 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 DPP8Q6V1X1 898 aaPredicted RBP15.66■□□□□ 0.1
ATG3-202ENST00000402314 MB21D1Q8N884 522 aa15.66■□□□□ 0.1
ATG3-202ENST00000402314 TRIM9Q9C026 710 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms