RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 EPSTI1Q96J88 318 aa17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 SAMSN1Q9NSI8 373 aaKnown RBP17.94■□□□□ 0.46
CHRFAM7A-203ENST00000401522 CNTNAP5Q8WYK1 1306 aa17.93■□□□□ 0.46
CHRFAM7A-203ENST00000401522 SYNRGQ9UMZ2 1314 aa17.93■□□□□ 0.46
CHRFAM7A-203ENST00000401522 A0A087X0B3 334 aa17.93■□□□□ 0.46
CHRFAM7A-203ENST00000401522 SNHG28P0DPA3 235 aa17.93■□□□□ 0.46
CHRFAM7A-203ENST00000401522 ATP2C1P98194 919 aaPredicted RBP17.93■□□□□ 0.46
CHRFAM7A-203ENST00000401522 DPYDQ12882 1025 aa17.93■□□□□ 0.46
CHRFAM7A-203ENST00000401522 CUL4BQ13620 913 aa17.93■□□□□ 0.46
CHRFAM7A-203ENST00000401522 CNKSR2Q8WXI2 1034 aa17.93■□□□□ 0.46
CHRFAM7A-203ENST00000401522 PANX2Q96RD6 677 aa17.93■□□□□ 0.46
CHRFAM7A-203ENST00000401522 GOPCQ9HD26 462 aa17.93■□□□□ 0.46
CHRFAM7A-203ENST00000401522 TMEM88BA6NKF7 163 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 C19orf81C9J6K1 198 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 TPM1P09493 284 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 HUNKP57058 714 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 NPY5RQ15761 445 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 PTPN21Q16825 1174 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 MNS1Q8NEH6 495 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 OPTNQ96CV9 577 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 CTAGE1Q96RT6 745 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 VCPKMTQ9H867 229 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 TLL2Q9Y6L7 1015 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 AKR1B15C9JRZ8 316 aaPredicted RBP17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 URI1O94763 535 aaPredicted RBP17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 PDHBP11177 359 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 AFMP43652 599 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 USP14P54578 494 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 PPIL2Q13356 520 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 CDKAL1Q5VV42 579 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 LRRN4CLQ8ND94 238 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 UBXN4Q92575 508 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 OTUD5Q96G74 571 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 GMCL1Q96IK5 515 aa17.92■□□□□ 0.46
CHRFAM7A-203ENST00000401522 hCG_1642624A0A1W2PR95 340 aa17.91■□□□□ 0.46
CHRFAM7A-203ENST00000401522 CXCL11O14625 94 aa17.91■□□□□ 0.46
CHRFAM7A-203ENST00000401522 IRF6O14896 467 aa17.91■□□□□ 0.46
CHRFAM7A-203ENST00000401522 CASQ1P31415 396 aa17.91■□□□□ 0.46
CHRFAM7A-203ENST00000401522 ADKP55263 362 aaKnown RBP17.91■□□□□ 0.46
CHRFAM7A-203ENST00000401522 MTMR2Q13614 643 aa17.91■□□□□ 0.46
CHRFAM7A-203ENST00000401522 ZNF174Q15697 407 aa17.91■□□□□ 0.46
CHRFAM7A-203ENST00000401522 SLFN13Q68D06 897 aa17.91■□□□□ 0.46
CHRFAM7A-203ENST00000401522 APTXQ7Z2E3 356 aaKnown RBP17.91■□□□□ 0.46
CHRFAM7A-203ENST00000401522 LPAR1Q92633 364 aa17.91■□□□□ 0.46
CHRFAM7A-203ENST00000401522 NAA15Q9BXJ9 866 aaKnown RBP17.91■□□□□ 0.46
CHRFAM7A-203ENST00000401522 KCNH4Q9UQ05 1017 aa17.91■□□□□ 0.46
CHRFAM7A-203ENST00000401522 EFCAB8A8MWE9 144 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 TADA3O75528 432 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 NDUFB10O96000 172 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 SCG2P13521 617 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 GRM4Q14833 912 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 FILIP1LQ4L180 1135 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 ARHGAP29Q52LW3 1261 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 SH3D19Q5HYK7 790 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 KIAA1755Q5JYT7 1200 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 SRBD1Q8N5C6 995 aaKnown RBP17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 IQUBQ8NA54 791 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 DCAF4Q8WV16 495 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 EMILIN3Q9NT22 766 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 PALM3A6NDB9 673 aaPredicted RBP17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 FANCGO15287 622 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 CD44P16070 742 aaKnown RBP17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 KIF5BP33176 963 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 PTGDRQ13258 359 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 BMS1Q14692 1282 aaKnown RBP17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 USP17L2Q6R6M4 530 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 TOGARAM2Q6ZUX3 1019 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 PPFIBP1Q86W92 1011 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 HHIPL1Q96JK4 782 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 C12orf42Q96LP6 360 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 ARGLU1Q9NWB6 273 aaPredicted RBP17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 MAD2L2Q9UI95 211 aa17.9■□□□□ 0.46
CHRFAM7A-203ENST00000401522 PPP1R3GB7ZBB8 358 aa17.89■□□□□ 0.45
CHRFAM7A-203ENST00000401522 WNT7AO00755 349 aa17.89■□□□□ 0.45
CHRFAM7A-203ENST00000401522 PARP1P09874 1014 aaKnown RBP17.89■□□□□ 0.45
CHRFAM7A-203ENST00000401522 GJA5P36382 358 aa17.89■□□□□ 0.45
CHRFAM7A-203ENST00000401522 PBX1P40424 430 aa17.89■□□□□ 0.45
CHRFAM7A-203ENST00000401522 SLC1A4P43007 532 aa17.89■□□□□ 0.45
CHRFAM7A-203ENST00000401522 NLRP5P59047 1200 aa17.89■□□□□ 0.45
CHRFAM7A-203ENST00000401522 GNG11P61952 73 aa17.89■□□□□ 0.45
CHRFAM7A-203ENST00000401522 ZYXQ15942 572 aaKnown RBP17.89■□□□□ 0.45
CHRFAM7A-203ENST00000401522 PFKFB3Q16875 520 aaPredicted RBP17.89■□□□□ 0.45
CHRFAM7A-203ENST00000401522 WNK4Q96J92 1243 aa17.89■□□□□ 0.45
CHRFAM7A-203ENST00000401522 ZNF446Q9NWS9 450 aa17.89■□□□□ 0.45
CHRFAM7A-203ENST00000401522 ADD3Q9UEY8 706 aaKnown RBP17.89■□□□□ 0.45
CHRFAM7A-203ENST00000401522 MTMR7Q9Y216 660 aa17.89■□□□□ 0.45
CHRFAM7A-203ENST00000401522 RAD21O60216 631 aa17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 KIF20AO95235 890 aa17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 ZBTB48P10074 688 aaPredicted RBP17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 CALML3P27482 149 aa17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 ZNF543Q08ER8 600 aa17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 E2F4Q16254 413 aa17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 ASPRV1Q53RT3 343 aa17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 GPATCH4Q5T3I0 446 aaKnown RBP17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 KLHL10Q6JEL2 608 aa17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 RGMBQ6NW40 437 aa17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 RASGRP2Q7LDG7 609 aa17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 SPICE1Q8N0Z3 855 aa17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 A0A0G2JLL6 359 aaPredicted RBP17.88■□□□□ 0.45
CHRFAM7A-203ENST00000401522 CCDC175P0C221 793 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms