RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 PNMA6FA0A0J9YX94 578 aa18.41■□□□□ 0.54
ATG4B-203ENST00000400772 B4DLN1 442 aa18.41■□□□□ 0.54
ATG4B-203ENST00000400772 ZEB2O60315 1214 aa18.41■□□□□ 0.54
ATG4B-203ENST00000400772 CABYRO75952 493 aa18.41■□□□□ 0.54
ATG4B-203ENST00000400772 DDAH1O94760 285 aa18.41■□□□□ 0.54
ATG4B-203ENST00000400772 CFBP00751 764 aa18.41■□□□□ 0.54
ATG4B-203ENST00000400772 MRPL12P52815 198 aaKnown RBP18.41■□□□□ 0.54
ATG4B-203ENST00000400772 FAM126BQ8IXS8 530 aa18.41■□□□□ 0.54
ATG4B-203ENST00000400772 SCFD2Q8WU76 684 aa18.41■□□□□ 0.54
ATG4B-203ENST00000400772 TMEM87BQ96K49 555 aa18.41■□□□□ 0.54
ATG4B-203ENST00000400772 IWS1Q96ST2 819 aa18.41■□□□□ 0.54
ATG4B-203ENST00000400772 RMDN3Q96TC7 470 aa18.41■□□□□ 0.54
ATG4B-203ENST00000400772 LRRC2Q9BYS8 371 aa18.41■□□□□ 0.54
ATG4B-203ENST00000400772 TBX21Q9UL17 535 aa18.41■□□□□ 0.54
ATG4B-203ENST00000400772 CD4P01730 458 aa18.4■□□□□ 0.54
ATG4B-203ENST00000400772 LIFRP42702 1097 aa18.4■□□□□ 0.54
ATG4B-203ENST00000400772 ITGA7Q13683 1181 aa18.4■□□□□ 0.54
ATG4B-203ENST00000400772 SHHQ15465 462 aa18.4■□□□□ 0.54
ATG4B-203ENST00000400772 CCDC62Q6P9F0 684 aa18.4■□□□□ 0.54
ATG4B-203ENST00000400772 RASEFQ8IZ41 740 aa18.4■□□□□ 0.54
ATG4B-203ENST00000400772 TMTC2Q8N394 836 aa18.4■□□□□ 0.54
ATG4B-203ENST00000400772 OR6J1Q8NGC5 347 aa18.4■□□□□ 0.54
ATG4B-203ENST00000400772 PXMP2Q9NR77 195 aa18.4■□□□□ 0.54
ATG4B-203ENST00000400772 MROH7Q68CQ1 1323 aa18.4■□□□□ 0.54
ATG4B-203ENST00000400772 NKRFO15226 690 aaKnown RBP eCLIP18.39■□□□□ 0.53
ATG4B-203ENST00000400772 TXNP10599 105 aaKnown RBP18.39■□□□□ 0.53
ATG4B-203ENST00000400772 RAG1P15918 1043 aa18.39■□□□□ 0.53
ATG4B-203ENST00000400772 EIF2AK2P19525 551 aaKnown RBP18.39■□□□□ 0.53
ATG4B-203ENST00000400772 HOXA13P31271 388 aaPredicted RBP18.39■□□□□ 0.53
ATG4B-203ENST00000400772 EPHB4P54760 987 aa18.39■□□□□ 0.53
ATG4B-203ENST00000400772 PSMC6P62333 389 aa18.39■□□□□ 0.53
ATG4B-203ENST00000400772 PPP2R5BQ15173 497 aa18.39■□□□□ 0.53
ATG4B-203ENST00000400772 TSGA10IPQ3SY00 556 aa18.39■□□□□ 0.53
ATG4B-203ENST00000400772 C9orf50Q5SZB4 431 aa18.39■□□□□ 0.53
ATG4B-203ENST00000400772 ARHGEF16Q5VV41 709 aa18.39■□□□□ 0.53
ATG4B-203ENST00000400772 SEPT14Q6ZU15 432 aa18.39■□□□□ 0.53
ATG4B-203ENST00000400772 SAMD3Q8N6K7 520 aa18.39■□□□□ 0.53
ATG4B-203ENST00000400772 MAP3K20Q9NYL2 800 aaKnown RBP18.39■□□□□ 0.53
ATG4B-203ENST00000400772 PLEKHA8P1O95397 391 aa18.38■□□□□ 0.53
ATG4B-203ENST00000400772 TIMP1P01033 207 aa18.38■□□□□ 0.53
ATG4B-203ENST00000400772 NR3C2P08235 984 aa18.38■□□□□ 0.53
ATG4B-203ENST00000400772 RXRAP19793 462 aa18.38■□□□□ 0.53
ATG4B-203ENST00000400772 SMARCA1P28370 1054 aa18.38■□□□□ 0.53
ATG4B-203ENST00000400772 PURAQ00577 322 aaKnown RBP18.38■□□□□ 0.53
ATG4B-203ENST00000400772 EXOSC10Q01780 885 aaKnown RBP18.38■□□□□ 0.53
ATG4B-203ENST00000400772 TTLL4Q14679 1199 aa18.38■□□□□ 0.53
ATG4B-203ENST00000400772 STXBP2Q15833 593 aa18.38■□□□□ 0.53
ATG4B-203ENST00000400772 LY6KQ17RY6 165 aa18.38■□□□□ 0.53
ATG4B-203ENST00000400772 ADCK5Q3MIX3 580 aa18.38■□□□□ 0.53
ATG4B-203ENST00000400772 RNF20Q5VTR2 975 aa18.38■□□□□ 0.53
ATG4B-203ENST00000400772 NFXL1Q6ZNB6 911 aa18.38■□□□□ 0.53
ATG4B-203ENST00000400772 SRBD1Q8N5C6 995 aaKnown RBP18.38■□□□□ 0.53
ATG4B-203ENST00000400772 CTCFLQ8NI51 663 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-203ENST00000400772 PIBF1Q8WXW3 757 aa18.38■□□□□ 0.53
ATG4B-203ENST00000400772 NEK1Q96PY6 1258 aa18.38■□□□□ 0.53
ATG4B-203ENST00000400772 SPZ1Q9BXG8 430 aa18.38■□□□□ 0.53
ATG4B-203ENST00000400772 CCDC69A6NI79 296 aa18.37■□□□□ 0.53
ATG4B-203ENST00000400772 A6NJR5 290 aa18.37■□□□□ 0.53
ATG4B-203ENST00000400772 KIF5BP33176 963 aa18.37■□□□□ 0.53
ATG4B-203ENST00000400772 CPT1AP50416 773 aa18.37■□□□□ 0.53
ATG4B-203ENST00000400772 GPR153Q6NV75 609 aa18.37■□□□□ 0.53
ATG4B-203ENST00000400772 SGMS1Q86VZ5 419 aa18.37■□□□□ 0.53
ATG4B-203ENST00000400772 RAB11FIP4Q86YS3 637 aa18.37■□□□□ 0.53
ATG4B-203ENST00000400772 PDCD2LQ9BRP1 358 aa18.37■□□□□ 0.53
ATG4B-203ENST00000400772 GCOM1H8Y6P7 765 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-203ENST00000400772 EIF3JO75822 258 aaKnown RBP18.36■□□□□ 0.53
ATG4B-203ENST00000400772 RGS20O76081 388 aa18.36■□□□□ 0.53
ATG4B-203ENST00000400772 MYL3P08590 195 aa18.36■□□□□ 0.53
ATG4B-203ENST00000400772 POLR2MP0CAP2 368 aa18.36■□□□□ 0.53
ATG4B-203ENST00000400772 TRAF1Q13077 416 aa18.36■□□□□ 0.53
ATG4B-203ENST00000400772 CMTR1Q8N1G2 835 aaKnown RBP18.36■□□□□ 0.53
ATG4B-203ENST00000400772 KCNB2Q92953 911 aa18.36■□□□□ 0.53
ATG4B-203ENST00000400772 TCEANC2Q96MN5 208 aa18.36■□□□□ 0.53
ATG4B-203ENST00000400772 LZTS2Q9BRK4 669 aa18.36■□□□□ 0.53
ATG4B-203ENST00000400772 SEZ6LQ9BYH1 1024 aa18.36■□□□□ 0.53
ATG4B-203ENST00000400772 POLR3EQ9NVU0 708 aa18.36■□□□□ 0.53
ATG4B-203ENST00000400772 DDX41Q9UJV9 622 aaKnown RBP18.36■□□□□ 0.53
ATG4B-203ENST00000400772 SLC12A7Q9Y666 1083 aa18.36■□□□□ 0.53
ATG4B-203ENST00000400772 TLR3O15455 904 aaKnown RBP18.35■□□□□ 0.53
ATG4B-203ENST00000400772 CALM1P0DP23 149 aa18.35■□□□□ 0.53
ATG4B-203ENST00000400772 CALM2P0DP24 149 aa18.35■□□□□ 0.53
ATG4B-203ENST00000400772 CALM3P0DP25 149 aa18.35■□□□□ 0.53
ATG4B-203ENST00000400772 GNAQP50148 359 aa18.35■□□□□ 0.53
ATG4B-203ENST00000400772 FPGSQ05932 587 aa18.35■□□□□ 0.53
ATG4B-203ENST00000400772 ARHGAP1Q07960 439 aa18.35■□□□□ 0.53
ATG4B-203ENST00000400772 PGM5Q15124 567 aa18.35■□□□□ 0.53
ATG4B-203ENST00000400772 MFSD5Q6N075 450 aa18.35■□□□□ 0.53
ATG4B-203ENST00000400772 DHX32Q7L7V1 743 aaKnown RBP18.35■□□□□ 0.53
ATG4B-203ENST00000400772 VSIG10LQ86VR7 867 aa18.35■□□□□ 0.53
ATG4B-203ENST00000400772 IL31RAQ8NI17 732 aa18.35■□□□□ 0.53
ATG4B-203ENST00000400772 RRP36Q96EU6 259 aaKnown RBP18.35■□□□□ 0.53
ATG4B-203ENST00000400772 MTG1Q9BT17 334 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-203ENST00000400772 TRPV6Q9H1D0 765 aa18.35■□□□□ 0.53
ATG4B-203ENST00000400772 KIAA1217Q5T5P2 1943 aa18.34■□□□□ 0.53
ATG4B-203ENST00000400772 B4GALT4O60513 344 aa18.34■□□□□ 0.53
ATG4B-203ENST00000400772 MYCLP12524 364 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-203ENST00000400772 C16orf59Q7L2K0 433 aa18.34■□□□□ 0.53
ATG4B-203ENST00000400772 FCHSD1Q86WN1 690 aa18.34■□□□□ 0.53
ATG4B-203ENST00000400772 FANCBQ8NB91 859 aa18.34■□□□□ 0.53
ATG4B-203ENST00000400772 AFG1LQ8WV93 481 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms