RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 FSCN1Q16658 493 aaKnown RBP9.74□□□□□ -0.85
USP16-202ENST00000399973 ERICH6BQ5W0A0 696 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 TAPT1Q6NXT6 567 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 APOA5Q6Q788 366 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 DHX32Q7L7V1 743 aaKnown RBP9.74□□□□□ -0.85
USP16-202ENST00000399973 CCDC82Q8N4S0 544 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 PCSK9Q8NBP7 692 aaKnown RBP9.74□□□□□ -0.85
USP16-202ENST00000399973 RGS22Q8NE09 1264 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 OR6J1Q8NGC5 347 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 MORC4Q8TE76 937 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 NSUN6Q8TEA1 469 aaKnown RBP9.74□□□□□ -0.85
USP16-202ENST00000399973 MTMR8Q96EF0 704 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 LBHD1Q9BQE6 289 aaPredicted RBP9.74□□□□□ -0.85
USP16-202ENST00000399973 TSEN34Q9BSV6 310 aaKnown RBP9.74□□□□□ -0.85
USP16-202ENST00000399973 SPZ1Q9BXG8 430 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 WDR11Q9BZH6 1224 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 RBM27Q9P2N5 1060 aaKnown RBP9.74□□□□□ -0.85
USP16-202ENST00000399973 SNX14Q9Y5W7 946 aa9.74□□□□□ -0.85
USP16-202ENST00000399973 TANC1Q9C0D5 1861 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 GOLGA8AA7E2F4 631 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 GOLGA8BA8MQT2 603 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 GCOM1H8Y6P7 765 aaPredicted RBP9.73□□□□□ -0.85
USP16-202ENST00000399973 ZBTB43O43298 467 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 HMGB1P09429 215 aaKnown RBP9.73□□□□□ -0.85
USP16-202ENST00000399973 POLR2MP0CAP2 368 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 MYCLP12524 364 aaPredicted RBP9.73□□□□□ -0.85
USP16-202ENST00000399973 EDNRBP24530 442 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 HSPA4P34932 840 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 TLE2Q04725 743 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 RTN1Q16799 776 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 IQSEC1Q6DN90 963 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 BLOC1S2Q6QNY1 142 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 CXCL17Q6UXB2 119 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 SEPT14Q6ZU15 432 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 SGMS1Q86VZ5 419 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 FCHSD1Q86WN1 690 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 KLHDC9Q8NEP7 349 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 SCFD2Q8WU76 684 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 MAP3K14Q99558 947 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 LZTS2Q9BRK4 669 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 PDLIM7Q9NR12 457 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 PXMP2Q9NR77 195 aa9.73□□□□□ -0.85
USP16-202ENST00000399973 GNEQ9Y223 722 aaKnown RBP9.73□□□□□ -0.85
USP16-202ENST00000399973 A0A0U1RQG5 324 aaPredicted RBP9.72□□□□□ -0.85
USP16-202ENST00000399973 CTAGE5O15320 804 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 ZEB2O60315 1214 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 MYL3P08590 195 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 CLTBP09497 229 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 TXNP10599 105 aaKnown RBP9.72□□□□□ -0.85
USP16-202ENST00000399973 CASTP20810 708 aaKnown RBP9.72□□□□□ -0.85
USP16-202ENST00000399973 CPT1AP50416 773 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 HSD17B4P51659 736 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 CHMP4BP1P59074 171 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 TTLL4Q14679 1199 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 SNX17Q15036 470 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 STXBP2Q15833 593 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 DUSP28Q4G0W2 176 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 Q6ZUG5 572 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 TMTC3Q6ZXV5 915 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 HEATR3Q7Z4Q2 680 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 SRBD1Q8N5C6 995 aaKnown RBP9.72□□□□□ -0.85
USP16-202ENST00000399973 IL31RAQ8NI17 732 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 SMARCC2Q8TAQ2 1214 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 COPS5Q92905 334 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 GPKOWQ92917 476 aaPredicted RBP eCLIP9.72□□□□□ -0.85
USP16-202ENST00000399973 BRF1Q92994 677 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 CUL5Q93034 780 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 UBE2OQ9C0C9 1292 aaKnown RBP9.72□□□□□ -0.85
USP16-202ENST00000399973 BRPF3Q9ULD4 1205 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 CNTNAP5Q8WYK1 1306 aa9.72□□□□□ -0.85
USP16-202ENST00000399973 DNAH12Q6ZR08 3092 aa9.71□□□□□ -0.85
USP16-202ENST00000399973 DCDC2CA8MYV0 355 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 SORBS3O60504 671 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 ARIH2O95376 493 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 NR3C2P08235 984 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 RPS6KB1P23443 525 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 CCND2P30279 289 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 PSMC6P62333 389 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 EXOSC10Q01780 885 aaKnown RBP9.71□□□□□ -0.86
USP16-202ENST00000399973 APOBRQ0VD83 1088 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 PGM5Q15124 567 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 TSGA10IPQ3SY00 556 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 BRDTQ58F21 947 aaPredicted RBP9.71□□□□□ -0.86
USP16-202ENST00000399973 CCSAPQ6IQ19 270 aaPredicted RBP9.71□□□□□ -0.86
USP16-202ENST00000399973 SH3RF1Q7Z6J0 888 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 FANCBQ8NB91 859 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 ZFP91Q96JP5 570 aaPredicted RBP9.71□□□□□ -0.86
USP16-202ENST00000399973 IWS1Q96ST2 819 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 GDF15Q99988 308 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 MAF1Q9H063 256 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 RBM28Q9NW13 759 aaKnown RBP9.71□□□□□ -0.86
USP16-202ENST00000399973 MRVI1Q9Y6F6 885 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 MROH7Q68CQ1 1323 aa9.71□□□□□ -0.86
USP16-202ENST00000399973 SCN10AQ9Y5Y9 1956 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 RBM47A0AV96 593 aaKnown RBP9.7□□□□□ -0.86
USP16-202ENST00000399973 NKRFO15226 690 aaKnown RBP eCLIP9.7□□□□□ -0.86
USP16-202ENST00000399973 TLR3O15455 904 aaKnown RBP9.7□□□□□ -0.86
USP16-202ENST00000399973 RAG1P15918 1043 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 PSMA5P28066 241 aa9.7□□□□□ -0.86
USP16-202ENST00000399973 METAP2P50579 478 aaKnown RBP eCLIP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms