RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 CSRNP1Q96S65 589 aa12.64□□□□□ -0.39
RCC1-204ENST00000398958 ACBD3Q9H3P7 528 aa12.64□□□□□ -0.39
RCC1-204ENST00000398958 TAB2Q9NYJ8 693 aa12.64□□□□□ -0.39
RCC1-204ENST00000398958 LRRIQ3A6PVS8 624 aaPredicted RBP12.63□□□□□ -0.39
RCC1-204ENST00000398958 USP17L10C9JJH3 530 aa12.63□□□□□ -0.39
RCC1-204ENST00000398958 TECP42680 631 aa12.63□□□□□ -0.39
RCC1-204ENST00000398958 E2F4Q16254 413 aa12.63□□□□□ -0.39
RCC1-204ENST00000398958 DACT2Q5SW24 774 aa12.63□□□□□ -0.39
RCC1-204ENST00000398958 PDXDC2PQ6P474 469 aa12.63□□□□□ -0.39
RCC1-204ENST00000398958 SAMD7Q7Z3H4 446 aa12.63□□□□□ -0.39
RCC1-204ENST00000398958 IGSF22Q8N9C0 903 aa12.63□□□□□ -0.39
RCC1-204ENST00000398958 TBC1D22AQ8WUA7 517 aa12.63□□□□□ -0.39
RCC1-204ENST00000398958 FAM198AQ9UFP1 575 aa12.63□□□□□ -0.39
RCC1-204ENST00000398958 PDS5AQ29RF7 1337 aaKnown RBP12.63□□□□□ -0.39
RCC1-204ENST00000398958 GH2P01242 217 aa12.63□□□□□ -0.39
RCC1-204ENST00000398958 TUBB4BP68371 445 aa12.63□□□□□ -0.39
RCC1-204ENST00000398958 TUBB2AQ13885 445 aa12.63□□□□□ -0.39
RCC1-204ENST00000398958 TUBB2BQ9BVA1 445 aa12.63□□□□□ -0.39
RCC1-204ENST00000398958 KLRG2A4D1S0 409 aaPredicted RBP12.62□□□□□ -0.39
RCC1-204ENST00000398958 GUCY2CP25092 1073 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 PMS1P54277 932 aaKnown RBP12.62□□□□□ -0.39
RCC1-204ENST00000398958 PPP4CP60510 307 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 TBC1D10BQ4KMP7 808 aaPredicted RBP12.62□□□□□ -0.39
RCC1-204ENST00000398958 DTHD1Q6ZMT9 781 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 SH3RF1Q7Z6J0 888 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 NLGN2Q8NFZ4 835 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 NAPGQ99747 312 aaPredicted RBP12.62□□□□□ -0.39
RCC1-204ENST00000398958 SNED1Q8TER0 1413 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 MKI67P46013 3256 aaKnown RBP12.62□□□□□ -0.39
RCC1-204ENST00000398958 A0A1B0GTH6 734 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 PALM3A6NDB9 673 aaPredicted RBP12.62□□□□□ -0.39
RCC1-204ENST00000398958 USP17L15C9J2P7 530 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 USP17L13C9JLJ4 530 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 USP17L11C9JVI0 530 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 USP17L18D6R9N7 530 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 USP17L22D6RA61 530 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 USP17L17D6RBQ6 530 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 USP17L19D6RCP7 530 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 USP17L20D6RJB6 530 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 RNF225M0QZC1 329 aaPredicted RBP12.62□□□□□ -0.39
RCC1-204ENST00000398958 SHMT1P34896 483 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 TNNI2P48788 182 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 USP17L24Q0WX57 530 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 KANK3Q6NY19 840 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 USP17L6PQ6QN14 398 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 C16orf86Q6ZW13 317 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 NOA1Q8NC60 698 aaKnown RBP12.62□□□□□ -0.39
RCC1-204ENST00000398958 ACRBPQ8NEB7 543 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 SPATA20Q8TB22 786 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 NAA15Q9BXJ9 866 aaKnown RBP12.62□□□□□ -0.39
RCC1-204ENST00000398958 GLIS2Q9BZE0 524 aaPredicted RBP12.62□□□□□ -0.39
RCC1-204ENST00000398958 MED4Q9NPJ6 270 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 BARHL2Q9NY43 387 aa12.62□□□□□ -0.39
RCC1-204ENST00000398958 FAM170AA1A519 330 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 NKRFO15226 690 aaKnown RBP eCLIP12.61□□□□□ -0.393e-6■□□□□ 8.1
RCC1-204ENST00000398958 RNF40O75150 1001 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 EEF2P13639 858 aaKnown RBP12.61□□□□□ -0.39
RCC1-204ENST00000398958 TXKP42681 527 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 PRCPP42785 496 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 CERKLQ49MI3 558 aaPredicted RBP12.61□□□□□ -0.39
RCC1-204ENST00000398958 NAALADL2Q58DX5 795 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 CNKSR1Q969H4 720 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 RNF216Q9NWF9 866 aaPredicted RBP12.61□□□□□ -0.39
RCC1-204ENST00000398958 LAMB1P07942 1786 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 PPFIA4O75335 1185 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 ABL1P00519 1130 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 CASP14P31944 242 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 UBA7P41226 1012 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 WHAMMP3Q1A5X7 153 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 POTEDQ86YR6 584 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 AFAP1L1Q8TED9 768 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 NELFBQ8WX92 580 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 DEF6Q9H4E7 631 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 RPN1P04843 607 aaKnown RBP12.61□□□□□ -0.39
RCC1-204ENST00000398958 HLA-DOAP06340 250 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 KCNA3P22001 575 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 CALML3P27482 149 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 SPATA1Q5VX52 437 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 APTXQ7Z2E3 356 aaKnown RBP12.61□□□□□ -0.39
RCC1-204ENST00000398958 ACER1Q8TDN7 264 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 TBCKQ8TEA7 893 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 GEMIN8Q9NWZ8 242 aaKnown RBP12.61□□□□□ -0.39
RCC1-204ENST00000398958 MTMR4Q9NYA4 1195 aa12.61□□□□□ -0.39
RCC1-204ENST00000398958 SCN9AQ15858 1988 aa12.6□□□□□ -0.39
RCC1-204ENST00000398958 M0R2N6 131 aa12.6□□□□□ -0.39
RCC1-204ENST00000398958 PDHBP11177 359 aa12.6□□□□□ -0.39
RCC1-204ENST00000398958 HOXA13P31271 388 aaPredicted RBP12.6□□□□□ -0.39
RCC1-204ENST00000398958 NCAPH2Q6IBW4 605 aa12.6□□□□□ -0.39
RCC1-204ENST00000398958 PODNQ7Z5L7 613 aa12.6□□□□□ -0.39
RCC1-204ENST00000398958 SEC63Q9UGP8 760 aaKnown RBP12.6□□□□□ -0.39
RCC1-204ENST00000398958 N4BP3O15049 544 aa12.6□□□□□ -0.39
RCC1-204ENST00000398958 MFAP3LO75121 409 aa12.6□□□□□ -0.39
RCC1-204ENST00000398958 TUBBP07437 444 aa12.6□□□□□ -0.39
RCC1-204ENST00000398958 FXR1P51114 621 aaKnown RBP eCLIP12.6□□□□□ -0.39
RCC1-204ENST00000398958 KRT31Q15323 416 aa12.6□□□□□ -0.39
RCC1-204ENST00000398958 DNAJC21Q5F1R6 531 aaKnown RBP12.6□□□□□ -0.39
RCC1-204ENST00000398958 SLF2Q8IX21 1173 aa12.6□□□□□ -0.39
RCC1-204ENST00000398958 OGFOD1Q8N543 542 aa12.6□□□□□ -0.39
RCC1-204ENST00000398958 NEDD1Q8NHV4 660 aa12.6□□□□□ -0.39
RCC1-204ENST00000398958 RRP36Q96EU6 259 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms