RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 NOL8Q76FK4 1167 aaKnown RBP11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 FAM133AQ8N9E0 248 aa11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 GLT1D1Q96MS3 346 aa11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 TOX2Q96NM4 488 aa11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 TRERF1Q96PN7 1200 aa11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 CDX2Q99626 313 aaPredicted RBP11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 UPF3AQ9H1J1 476 aaKnown RBP11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 TTYH1Q9H313 450 aaPredicted RBP11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 SPC25Q9HBM1 224 aa11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 GPCPD1Q9NPB8 672 aa11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 A1CFQ9NQ94 594 aaKnown RBP11.6□□□□□ -0.55
NIFKP1-201ENST00000398317 TRIM66O15016 1216 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 CTAGE5O15320 804 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 PLA2G6O60733 806 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 TIMP1P01033 207 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 CST5P28325 142 aaPredicted RBP11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 PDE1AP54750 535 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 BEX3Q00994 111 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 CCDC96Q2M329 555 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 RRP12Q5JTH9 1297 aaKnown RBP11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 TTBK2Q6IQ55 1244 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 PCSK9Q8NBP7 692 aaKnown RBP11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 EVI5LQ96CN4 794 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 FAM227BQ96M60 508 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 PURBQ96QR8 312 aaKnown RBP11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 PRR14Q9BWN1 585 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 TOMM22Q9NS69 142 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 ANAPC4Q9UJX5 808 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 PRR12Q9ULL5 1215 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 ASTN1O14525 1302 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 ELP1O95163 1332 aa11.59□□□□□ -0.55
NIFKP1-201ENST00000398317 LRRC37A2A6NM11 1700 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 A0A0D9SFI3 127 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 A0A0U1RQG5 324 aaPredicted RBP11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 ARVCFO00192 962 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 CD46P15529 392 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 CLCN1P35523 988 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 SLC16A2P36021 539 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 CDK7P50613 346 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 TNFAIP2Q03169 654 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 FUT2Q10981 343 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 ALX1Q15699 326 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 TKFCQ3LXA3 575 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 EEPD1Q7L9B9 569 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 MYLIPQ8WY64 445 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 PDGFCQ9NRA1 345 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 HELLSQ9NRZ9 838 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 TBX21Q9UL17 535 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 CCPG1Q9ULG6 757 aa11.58□□□□□ -0.56
NIFKP1-201ENST00000398317 ASB14A6NK59 587 aa11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 ORC4O43929 436 aa11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 FGAP02671 866 aa11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 GCGRP47871 477 aa11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 NOVP48745 357 aa11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 HAND2P61296 217 aa11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 MCMDC2Q4G0Z9 681 aa11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 TMEM63BQ5T3F8 832 aa11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 CXCL17Q6UXB2 119 aa11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 NSMFQ6X4W1 530 aa11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 ZNF589Q86UQ0 364 aaPredicted RBP11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 FBXO16Q8IX29 292 aaPredicted RBP11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 DCAF4Q8WV16 495 aa11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 TMUB1Q9BVT8 246 aa11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 PPP1R12CQ9BZL4 782 aa11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 FAM217BQ9NTX9 383 aaPredicted RBP11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 CYP39A1Q9NYL5 469 aa11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 GNEQ9Y223 722 aaKnown RBP11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 SPTBN5Q9NRC6 3674 aaKnown RBP11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 MROH7Q68CQ1 1323 aa11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 FRMPD2Q68DX3 1309 aaPredicted RBP11.57□□□□□ -0.56
NIFKP1-201ENST00000398317 CHD9Q3L8U1 2897 aa11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 DYNC1LI2O43237 492 aaPredicted RBP11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 ICAM1P05362 532 aa11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 FGRP09769 529 aa11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 ACRP10323 421 aa11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 HSPD1P10809 573 aaKnown RBP11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 CSF2RAP15509 400 aa11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 SMPD1P17405 629 aa11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 NMIQ13287 307 aaPredicted RBP11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 HDAC1Q13547 482 aaPredicted RBP11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 FSCN1Q16658 493 aaKnown RBP11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 SYDE2Q5VT97 1194 aa11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 MFSD5Q6N075 450 aa11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 TAPT1Q6NXT6 567 aa11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 C16orf59Q7L2K0 433 aa11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 TLK2Q86UE8 772 aa11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 FAM126BQ8IXS8 530 aa11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 MAFAQ8NHW3 353 aaPredicted RBP11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 TMEM47Q9BQJ4 181 aa11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 COL25A1Q9BXS0 654 aaPredicted RBP11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 LNPKQ9C0E8 428 aa11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 RANBP17Q9H2T7 1088 aaKnown RBP11.56□□□□□ -0.56
NIFKP1-201ENST00000398317 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 GRXCR1A8MXD5 290 aa11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 TLR3O15455 904 aaKnown RBP11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 TOP1P11387 765 aaKnown RBP11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 FOSL2P15408 326 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms