RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 ZNF446Q9NWS9 450 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 MRFAP1Q9Y605 127 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 DUSP10Q9Y6W6 482 aa11.62□□□□□ -0.55
CPSF1P1-201ENST00000397477 LGALS16A8MUM7 142 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 DDX39AO00148 427 aaKnown RBP11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 PLEKP08567 350 aaPredicted RBP11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 EEF2P13639 858 aaKnown RBP11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 OAS2P29728 719 aaKnown RBP11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 ICA1Q05084 483 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 RAPGEF1Q13905 1077 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 CDC42EP5Q6NZY7 148 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 CERS5Q8N5B7 392 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 NEK11Q8NG66 645 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 LIMA1Q9UHB6 759 aaKnown RBP11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 ZBTB21Q9ULJ3 1066 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 POTEB3A0JP26 581 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 SFI1A8K8P3 1242 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 POTECB2RU33 542 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 POTEBQ6S5H4 581 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 GOLGA6L1Q8N7Z2 621 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 C4orf32Q8N8J7 132 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 SPZ1Q9BXG8 430 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 MYO6Q9UM54 1294 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 USO1O60763 962 aaKnown RBP11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 CRKP46108 304 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 KRT83P78385 493 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 MAP3K9P80192 1104 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 TBC1D10BQ4KMP7 808 aaPredicted RBP11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 SRGAP1Q7Z6B7 1085 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 GPR161Q8N6U8 529 aaKnown RBP11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 NHEJ1Q9H9Q4 299 aaPredicted RBP11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 JMJD4Q9H9V9 463 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 PANK4Q9NVE7 773 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 VPS18Q9P253 973 aa11.61□□□□□ -0.55
CPSF1P1-201ENST00000397477 TRIM14Q14142 442 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 ASPRV1Q53RT3 343 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 COA1Q9GZY4 146 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 EEF1GP26641 437 aaKnown RBP11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 SMC1AQ14683 1233 aaKnown RBP11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 QRICH1Q2TAL8 776 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 TMED8Q6PL24 325 aaPredicted RBP11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 ELOA2Q8IYF1 753 aaPredicted RBP11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 CCDC51Q96ER9 411 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 CCSER1Q9C0I3 900 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 TMOD2Q9NZR1 351 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 MKRN1Q9UHC7 482 aaKnown RBP11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 COL14A1Q05707 1796 aaKnown RBP11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 PNMA6FA0A0J9YX94 578 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 NKRFO15226 690 aaKnown RBP eCLIP11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 RAD17O75943 681 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 KCNJ6P48051 423 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 DMTNQ08495 405 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 CCDC70Q6NSX1 233 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 MIGA2Q7L4E1 593 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 KCNK18Q7Z418 384 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 GIMAP8Q8ND71 665 aaPredicted RBP11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 LRRC15Q8TF66 581 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 KIFC2Q96AC6 838 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 DHTKD1Q96HY7 919 aaPredicted RBP11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 AK8Q96MA6 479 aa11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 IFIH1Q9BYX4 1025 aaKnown RBP11.6□□□□□ -0.55
CPSF1P1-201ENST00000397477 POTEFA5A3E0 1075 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 ZNF185O15231 689 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 GH2P01242 217 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 POTEIP0CG38 1075 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 NOP2P46087 812 aaKnown RBP11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 CDC37Q16543 378 aaPredicted RBP11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 AOC3Q16853 763 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 LONRF2Q1L5Z9 754 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 FAM26FQ5R3K3 315 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 POTEGQ6S5H5 508 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 POTEEQ6S8J3 1075 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 CCDC84Q86UT8 332 aaPredicted RBP11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 GSPT2Q8IYD1 628 aaKnown RBP11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 MYOCDQ8IZQ8 938 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 FNBP4Q8N3X1 1017 aaPredicted RBP11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 CCDC43Q96MW1 224 aaKnown RBP11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 H0YIN7 160 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 LAD1O00515 517 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 FGFR1OPO95684 399 aaKnown RBP11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 POLR2FP61218 127 aaKnown RBP11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 APBA1Q02410 837 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 CCDC93Q567U6 631 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 APTXQ7Z2E3 356 aaKnown RBP11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 TMC4Q7Z404 712 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 RDH13Q8NBN7 331 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 SPAG5Q96R06 1193 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 NDST4Q9H3R1 872 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 XIRP1Q702N8 1843 aaKnown RBP11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 RHOBTB3O94955 611 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 ATP1A1P05023 1023 aaKnown RBP11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 MAGEA1P43355 309 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 ZNF543Q08ER8 600 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 GRB10Q13322 594 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 IRF2BP1Q8IU81 584 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 NOA1Q8NC60 698 aaKnown RBP11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 RABEP2Q9H5N1 569 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 MLXIPQ9HAP2 919 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 PDE11AQ9HCR9 933 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 HOMER2Q9NSB8 354 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms