RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 HSPD1P10809 573 aaKnown RBP11.18□□□□□ -0.62
COL4A4-201ENST00000396625 PLEKHM2Q8IWE5 1019 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 JDP2Q8WYK2 163 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 KLC2Q9H0B6 622 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 SNX5Q9Y5X3 404 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 DISP3Q9P2K9 1392 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 L3MBTL1Q9Y468 752 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 V9GY48 417 aaPredicted RBP11.18□□□□□ -0.62
COL4A4-201ENST00000396625 NR1I2O75469 434 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 PYGBP11216 843 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 POLR2BP30876 1174 aaKnown RBP11.18□□□□□ -0.62
COL4A4-201ENST00000396625 SGO2Q562F6 1265 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 CATSPER3Q86XQ3 398 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 TRIML1Q8N9V2 468 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 TSC22D4Q9Y3Q8 395 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 PSMD7P51665 324 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 RASSF7Q02833 373 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 C1orf146Q5VVC0 180 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 LMBR1LQ6UX01 489 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 CCHCR1Q8TD31 782 aa11.18□□□□□ -0.62
COL4A4-201ENST00000396625 SEC31AO94979 1220 aaKnown RBP11.17□□□□□ -0.62
COL4A4-201ENST00000396625 SLC1A4P43007 532 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 NBPF20Q3BBV1 942 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 PCGF5Q86SE9 256 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 MCF2L2Q86YR7 1114 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 TAGAPQ8N103 731 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 RYBPQ8N488 228 aaPredicted RBP11.17□□□□□ -0.62
COL4A4-201ENST00000396625 TEX9Q8N6V9 391 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 PPP1R13BQ96KQ4 1090 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 NR1D1P20393 614 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 DEPDC1Q5TB30 811 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 CABP7Q86V35 215 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 RDH13Q8NBN7 331 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 HDLBPQ00341 1268 aaKnown RBP11.17□□□□□ -0.62
COL4A4-201ENST00000396625 MMS22LQ6ZRQ5 1243 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 DNAAF3Q8N9W5 541 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 HIPK4Q8NE63 616 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 ARMCX3Q9UH62 379 aaPredicted RBP11.17□□□□□ -0.62
COL4A4-201ENST00000396625 WDR91A4D1P6 747 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 STAT2P52630 851 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 CRLF3Q8IUI8 442 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 MAGED2Q9UNF1 606 aaPredicted RBP11.17□□□□□ -0.62
COL4A4-201ENST00000396625 LIG4P49917 911 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 GNPTABQ3T906 1256 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 DTNBP1Q96EV8 351 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 EPAS1Q99814 870 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 ATP6V0A4Q9HBG4 840 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 MAPKBP1O60336 1514 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 SLCO1A2P46721 670 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 RWDD2BP57060 319 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 UBE3AQ05086 875 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 TJAP1Q5JTD0 557 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 DEPTORQ8TB45 409 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 LZTS1Q9Y250 596 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 ZMYND10O75800 440 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 DHX9Q08211 1270 aaKnown RBP11.17□□□□□ -0.62
COL4A4-201ENST00000396625 KSR2Q6VAB6 950 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 CADPS2Q86UW7 1296 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 SH3GL2Q99962 352 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 KCNG1Q9UIX4 513 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 TLK1Q9UKI8 766 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 SUGT1Q9Y2Z0 365 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 MYH8P13535 1937 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 H0Y3Z8 333 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 STX19Q8N4C7 294 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 YIPF3Q9GZM5 350 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 PANK4Q9NVE7 773 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 CFAP43Q8NDM7 1665 aa11.17□□□□□ -0.62
COL4A4-201ENST00000396625 ARHGAP10A1A4S6 786 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 GYG2O15488 501 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 SCG2P13521 617 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 AP2B1P63010 937 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 GRIN1Q05586 938 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 TCP11X2Q5H9J9 407 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 ZBTB18Q99592 522 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 IFNA8P32881 189 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 C2orf54Q08AI8 447 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 MYOCDQ8IZQ8 938 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 CACTINQ8WUQ7 758 aaKnown RBP11.16□□□□□ -0.62
COL4A4-201ENST00000396625 NUDCD1Q96RS6 583 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 CHCHD3Q9NX63 227 aaKnown RBP11.16□□□□□ -0.62
COL4A4-201ENST00000396625 HESX1Q9UBX0 185 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 ECEL1O95672 775 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 MT-ND3P03897 115 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 TMOD1P28289 359 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 TTC6Q86TZ1 520 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 NNTQ13423 1086 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 FRA10AC1Q70Z53 315 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 COPS6Q7L5N1 327 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 PPM1KQ8N3J5 372 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 KCTD6Q8NC69 237 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 MTBPQ96DY7 904 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 TRIM33Q9UPN9 1127 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 ATP11BQ9Y2G3 1177 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 RGS9BPQ6ZS82 235 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 ABHD8Q96I13 439 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 TMEM60Q9H2L4 133 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 EPB41L5Q9HCM4 733 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 ORC4O43929 436 aa11.16□□□□□ -0.62
COL4A4-201ENST00000396625 WDR47O94967 919 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms