RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 CCDC170Q8IYT3 715 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 TTLL6Q8N841 843 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 RSAD2Q8WXG1 361 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 RC3H1Q5TC82 1133 aaKnown RBP17.12■□□□□ 0.33
GNE-202ENST00000396594 INO80BQ9C086 356 aaPredicted RBP17.12■□□□□ 0.33
GNE-202ENST00000396594 GINM1Q9NU53 330 aa17.12■□□□□ 0.33
GNE-202ENST00000396594 JAK2O60674 1132 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 KRT19P08727 400 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 SLFN14P0C7P3 912 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 KPNA2P52292 529 aaKnown RBP17.11■□□□□ 0.33
GNE-202ENST00000396594 MYRIPQ8NFW9 859 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 MRPL47Q9HD33 250 aaKnown RBP17.11■□□□□ 0.33
GNE-202ENST00000396594 ABCB11O95342 1321 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 PTH1RQ03431 593 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 ADAM9Q13443 819 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 RPS6KC1Q96S38 1066 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 PLA2G12BQ9BX93 195 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 RWDD2AQ9UIY3 292 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 KRT81Q14533 505 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 ZYXQ15942 572 aaKnown RBP17.11■□□□□ 0.33
GNE-202ENST00000396594 RCOR1Q9UKL0 485 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 JCADQ9P266 1359 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 MYL7Q01449 175 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 BRINP3Q76B58 766 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 USP28Q96RU2 1077 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 ZNF577Q9BSK1 485 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 VPS18Q9P253 973 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 FEM1BQ9UK73 627 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 PNPLA6Q8IY17 1366 aa17.11■□□□□ 0.33
GNE-202ENST00000396594 PASKQ96RG2 1323 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 NEXMIFQ5QGS0 1516 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 RHOXF2BP0C7M4 288 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 GNAT1P11488 350 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 FKBP3Q00688 224 aaKnown RBP17.1■□□□□ 0.33
GNE-202ENST00000396594 CDKL2Q92772 493 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 RHOXF2Q9BQY4 288 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 JRKLQ9Y4A0 524 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 DDX39AO00148 427 aaKnown RBP17.1■□□□□ 0.33
GNE-202ENST00000396594 KCNQ3O43525 872 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 NSFP46459 744 aaKnown RBP17.1■□□□□ 0.33
GNE-202ENST00000396594 EXOC3L4Q17RC7 722 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 DNAJC21Q5F1R6 531 aaKnown RBP17.1■□□□□ 0.33
GNE-202ENST00000396594 EFCAB8A8MWE9 144 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 RNF40O75150 1001 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 TECP42680 631 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 TNFAIP2Q03169 654 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 ARHGAP27Q6ZUM4 889 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 MYL10Q9BUA6 226 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 SRPRBQ9Y5M8 271 aaKnown RBP17.1■□□□□ 0.33
GNE-202ENST00000396594 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.1■□□□□ 0.33
GNE-202ENST00000396594 AFPP02771 609 aaKnown RBP17.1■□□□□ 0.33
GNE-202ENST00000396594 TROVE2P10155 538 aaKnown RBP eCLIP17.1■□□□□ 0.33
GNE-202ENST00000396594 PTPN12Q05209 780 aaKnown RBP17.1■□□□□ 0.33
GNE-202ENST00000396594 RNASELQ05823 741 aaKnown RBP17.1■□□□□ 0.33
GNE-202ENST00000396594 LONRF2Q1L5Z9 754 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 TIPINQ9BVW5 301 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 SLC12A6Q9UHW9 1150 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 ASAP1Q9ULH1 1129 aa17.1■□□□□ 0.33
GNE-202ENST00000396594 TEX2Q8IWB9 1127 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 P2RX5Q93086 422 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 MED4Q9NPJ6 270 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 FAM8A1Q9UBU6 413 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 PCDHA7Q9UN72 937 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 NEURL4Q96JN8 1562 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 CFAP65Q6ZU64 1925 aaKnown RBP17.09■□□□□ 0.33
GNE-202ENST00000396594 SEC24BO95487 1268 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 PTGDRQ13258 359 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 BZW1Q7L1Q6 419 aaKnown RBP17.09■□□□□ 0.33
GNE-202ENST00000396594 KIAA0825Q8IV33 1275 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 MID2Q9UJV3 735 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 TCP10L2B9ZVM9 353 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 RFX1P22670 979 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 NCAPG2Q86XI2 1143 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 PROM2Q8N271 834 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.09■□□□□ 0.33
GNE-202ENST00000396594 COPB1P53618 953 aaKnown RBP17.09■□□□□ 0.33
GNE-202ENST00000396594 ERFEQ4G0M1 354 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 NELFCDQ8IXH7 590 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 NSUN7Q8NE18 718 aaKnown RBP17.09■□□□□ 0.33
GNE-202ENST00000396594 VCX3BQ9H321 246 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 ZNF408Q9H9D4 720 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 NRKQ7Z2Y5 1582 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 COL15A1P39059 1388 aa17.09■□□□□ 0.33
GNE-202ENST00000396594 TLDC2A0PJX2 215 aa17.08■□□□□ 0.33
GNE-202ENST00000396594 KIAA0391O15091 583 aaKnown RBP17.08■□□□□ 0.33
GNE-202ENST00000396594 KCNV1Q6PIU1 500 aa17.08■□□□□ 0.33
GNE-202ENST00000396594 ENOX1Q8TC92 643 aaKnown RBP17.08■□□□□ 0.33
GNE-202ENST00000396594 SYMPKQ92797 1274 aaKnown RBP17.08■□□□□ 0.33
GNE-202ENST00000396594 HSPA8P11142 646 aaKnown RBP17.08■□□□□ 0.32
GNE-202ENST00000396594 PNOCQ13519 176 aa17.08■□□□□ 0.32
GNE-202ENST00000396594 U2AF1L4Q8WU68 220 aaKnown RBP17.08■□□□□ 0.32
GNE-202ENST00000396594 ZNF341Q9BYN7 854 aa17.08■□□□□ 0.32
GNE-202ENST00000396594 ARHGEF40Q8TER5 1519 aa17.08■□□□□ 0.32
GNE-202ENST00000396594 SCRN1Q12765 414 aa17.08■□□□□ 0.32
GNE-202ENST00000396594 MED10Q9BTT4 135 aa17.08■□□□□ 0.32
GNE-202ENST00000396594 XPO4Q9C0E2 1151 aaKnown RBP17.08■□□□□ 0.32
GNE-202ENST00000396594 RSPH14Q9UHP6 348 aa17.08■□□□□ 0.32
GNE-202ENST00000396594 OATP04181 439 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 SFNP31947 248 aa17.07■□□□□ 0.32
GNE-202ENST00000396594 PSMC4P43686 418 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms