RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 DDX25Q9UHL0 483 aaKnown RBP14.42□□□□□ -0.1
TRIM39-204ENST00000396548 IGLV3-22A0A075B6J6 115 aa14.41□□□□□ -0.1
TRIM39-204ENST00000396548 GOLGA6L3A6NEY3 463 aa14.41□□□□□ -0.1
TRIM39-204ENST00000396548 FAM86B1E9PN63 330 aa14.41□□□□□ -0.1
TRIM39-204ENST00000396548 CFBP00751 764 aa14.41□□□□□ -0.1
TRIM39-204ENST00000396548 FAM86B2P0C5J1 330 aa14.41□□□□□ -0.1
TRIM39-204ENST00000396548 TTLL12Q14166 644 aaPredicted RBP14.41□□□□□ -0.1
TRIM39-204ENST00000396548 CALCRLQ16602 461 aa14.41□□□□□ -0.1
TRIM39-204ENST00000396548 CST9Q5W186 159 aa14.41□□□□□ -0.1
TRIM39-204ENST00000396548 ETNPPLQ8TBG4 499 aa14.41□□□□□ -0.1
TRIM39-204ENST00000396548 MAF1Q9H063 256 aa14.41□□□□□ -0.1
TRIM39-204ENST00000396548 AGTPBP1Q9UPW5 1226 aa14.41□□□□□ -0.1
TRIM39-204ENST00000396548 SPDYE3A6NKU9 549 aa14.41□□□□□ -0.1
TRIM39-204ENST00000396548 POLR2DO15514 142 aaKnown RBP14.41□□□□□ -0.1
TRIM39-204ENST00000396548 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
TRIM39-204ENST00000396548 AK8Q96MA6 479 aa14.41□□□□□ -0.1
TRIM39-204ENST00000396548 MMTAG2Q9BU76 263 aaKnown RBP14.41□□□□□ -0.1
TRIM39-204ENST00000396548 CCSER1Q9C0I3 900 aa14.41□□□□□ -0.1
TRIM39-204ENST00000396548 TSPY26PQ9H489 355 aa14.41□□□□□ -0.1
TRIM39-204ENST00000396548 CNMDO75829 334 aa14.4□□□□□ -0.1
TRIM39-204ENST00000396548 MCF2L2Q86YR7 1114 aa14.4□□□□□ -0.1
TRIM39-204ENST00000396548 CPXCR1Q8N123 301 aa14.4□□□□□ -0.1
TRIM39-204ENST00000396548 TRERF1Q96PN7 1200 aa14.4□□□□□ -0.1
TRIM39-204ENST00000396548 PDIA5Q14554 519 aa14.4□□□□□ -0.1
TRIM39-204ENST00000396548 LRRC15Q8TF66 581 aa14.4□□□□□ -0.1
TRIM39-204ENST00000396548 MS4A4AQ96JQ5 239 aa14.4□□□□□ -0.1
TRIM39-204ENST00000396548 KIAA1468Q9P260 1216 aa14.4□□□□□ -0.1
TRIM39-204ENST00000396548 SERTAD1Q9UHV2 236 aa14.4□□□□□ -0.1
TRIM39-204ENST00000396548 TUBE1Q9UJT0 475 aa14.4□□□□□ -0.1
TRIM39-204ENST00000396548 PP2D1A8MPX8 630 aa14.4□□□□□ -0.1
TRIM39-204ENST00000396548 ALAS1P13196 640 aa14.4□□□□□ -0.1
TRIM39-204ENST00000396548 PDXDC2PQ6P474 469 aa14.4□□□□□ -0.1
TRIM39-204ENST00000396548 SYTL5Q8TDW5 730 aaPredicted RBP14.4□□□□□ -0.1
TRIM39-204ENST00000396548 GRPEL1Q9HAV7 217 aa14.4□□□□□ -0.1
TRIM39-204ENST00000396548 FOXN1O15353 648 aa14.39□□□□□ -0.11
TRIM39-204ENST00000396548 TYRO3Q06418 890 aa14.39□□□□□ -0.11
TRIM39-204ENST00000396548 TKFCQ3LXA3 575 aa14.39□□□□□ -0.11
TRIM39-204ENST00000396548 NT5DC1Q5TFE4 455 aa14.39□□□□□ -0.11
TRIM39-204ENST00000396548 SPATA20Q8TB22 786 aa14.39□□□□□ -0.11
TRIM39-204ENST00000396548 GBA2Q9HCG7 927 aaPredicted RBP14.39□□□□□ -0.11
TRIM39-204ENST00000396548 BTBD7Q9P203 1132 aa14.39□□□□□ -0.11
TRIM39-204ENST00000396548 TBX3O15119 743 aa14.39□□□□□ -0.11
TRIM39-204ENST00000396548 SPIRE1Q08AE8 756 aa14.39□□□□□ -0.11
TRIM39-204ENST00000396548 NAALADL2Q58DX5 795 aa14.39□□□□□ -0.11
TRIM39-204ENST00000396548 GADL1Q6ZQY3 521 aa14.39□□□□□ -0.11
TRIM39-204ENST00000396548 LRRC37A2A6NM11 1700 aa14.39□□□□□ -0.11
TRIM39-204ENST00000396548 SLFN14P0C7P3 912 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 CDC25AP30304 524 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 TECP42680 631 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 SNRNP48Q6IEG0 339 aaKnown RBP14.38□□□□□ -0.11
TRIM39-204ENST00000396548 SLC30A10Q6XR72 485 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 FCHSD1Q86WN1 690 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 ERCC4Q92889 916 aaPredicted RBP14.38□□□□□ -0.11
TRIM39-204ENST00000396548 MTRQ99707 1265 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 TEX13BQ9BXU2 312 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 ASCC2Q9H1I8 757 aaPredicted RBP14.38□□□□□ -0.11
TRIM39-204ENST00000396548 USP25Q9UHP3 1055 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 SARSP49591 514 aaKnown RBP14.38□□□□□ -0.11
TRIM39-204ENST00000396548 FASTKD5Q7L8L6 764 aaKnown RBP14.38□□□□□ -0.11
TRIM39-204ENST00000396548 CYP2W1Q8TAV3 490 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 SLC10A4Q96EP9 437 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 RNF146Q9NTX7 359 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 CCDC192P0DO97 292 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 XRCC6P12956 609 aaKnown RBP eCLIP14.38□□□□□ -0.11
TRIM39-204ENST00000396548 TXKP42681 527 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 MRE11P49959 708 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 RPS6P62753 249 aaKnown RBP14.38□□□□□ -0.11
TRIM39-204ENST00000396548 CHADLQ6NUI6 762 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.38□□□□□ -0.11
TRIM39-204ENST00000396548 MB21D1Q8N884 522 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 GJA10Q969M2 543 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 SDF4Q9BRK5 362 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 PANK2Q9BZ23 570 aa14.38□□□□□ -0.11
TRIM39-204ENST00000396548 CELF2O95319 508 aaKnown RBP14.37□□□□□ -0.11
TRIM39-204ENST00000396548 SNAPC2Q13487 334 aa14.37□□□□□ -0.11
TRIM39-204ENST00000396548 PNOCQ13519 176 aa14.37□□□□□ -0.11
TRIM39-204ENST00000396548 CNNM3Q8NE01 707 aa14.37□□□□□ -0.11
TRIM39-204ENST00000396548 ZNF408Q9H9D4 720 aa14.37□□□□□ -0.11
TRIM39-204ENST00000396548 DISC1Q9NRI5 854 aa14.37□□□□□ -0.11
TRIM39-204ENST00000396548 MSH4O15457 936 aa14.37□□□□□ -0.11
TRIM39-204ENST00000396548 PRR29P0C7W0 189 aa14.37□□□□□ -0.11
TRIM39-204ENST00000396548 DEKP35659 375 aaKnown RBP14.37□□□□□ -0.11
TRIM39-204ENST00000396548 PAGE5Q96GU1 130 aa14.37□□□□□ -0.11
TRIM39-204ENST00000396548 TTC12Q9H892 705 aaPredicted RBP14.37□□□□□ -0.11
TRIM39-204ENST00000396548 HOMER2Q9NSB8 354 aa14.37□□□□□ -0.11
TRIM39-204ENST00000396548 PASKQ96RG2 1323 aa14.37□□□□□ -0.11
TRIM39-204ENST00000396548 MEIS1O00470 390 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 STAT3P40763 770 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 KARSQ15046 597 aaKnown RBP14.36□□□□□ -0.11
TRIM39-204ENST00000396548 RIOX2Q8IUF8 465 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 PDILTQ8N807 584 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 IL31RAQ8NI17 732 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 DHX58Q96C10 678 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.36□□□□□ -0.11
TRIM39-204ENST00000396548 SLC45A1Q9Y2W3 748 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 RABGAP1Q9Y3P9 1069 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 PEX10O60683 326 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 HERVK_113P62684 666 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 PCNX4Q63HM2 1172 aa14.36□□□□□ -0.11
TRIM39-204ENST00000396548 RNF207Q6ZRF8 634 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms