RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 ZMYND10O75800 440 aa11.54□□□□□ -0.56
TUBB-208ENST00000396389 CASP8Q14790 479 aa11.54□□□□□ -0.56
TUBB-208ENST00000396389 FKBP1CQ5VVH2 108 aa11.54□□□□□ -0.56
TUBB-208ENST00000396389 TATDN1Q6P1N9 297 aa11.54□□□□□ -0.56
TUBB-208ENST00000396389 SRGAP1Q7Z6B7 1085 aa11.54□□□□□ -0.56
TUBB-208ENST00000396389 NOA1Q8NC60 698 aaKnown RBP11.54□□□□□ -0.56
TUBB-208ENST00000396389 ZNF784Q8NCA9 323 aaPredicted RBP11.54□□□□□ -0.56
TUBB-208ENST00000396389 KLRG1Q96E93 195 aa11.54□□□□□ -0.56
TUBB-208ENST00000396389 PICK1Q9NRD5 415 aa11.54□□□□□ -0.56
TUBB-208ENST00000396389 MYH1P12882 1939 aa11.54□□□□□ -0.56
TUBB-208ENST00000396389 DICER1Q9UPY3 1922 aaKnown RBP11.53□□□□□ -0.56
TUBB-208ENST00000396389 CBFA2T2O43439 604 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 TTLL1O95922 423 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 FGRP09769 529 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 EHD4Q9H223 541 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 NFE2L3Q9Y4A8 694 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 NAV1Q8NEY1 1877 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 MKI67P46013 3256 aaKnown RBP11.53□□□□□ -0.56
TUBB-208ENST00000396389 ZC3H4Q9UPT8 1303 aaKnown RBP11.53□□□□□ -0.56
TUBB-208ENST00000396389 MAFGO15525 162 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 CMA1P23946 247 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 GUCY2CP25092 1073 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 NF2P35240 595 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 HMGCS2P54868 508 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 BRD3Q15059 726 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 MICALL1Q8N3F8 863 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 TMEM87BQ96K49 555 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 SLC26A6Q9BXS9 759 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 POLR3EQ9NVU0 708 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 SSC5DA1L4H1 1573 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 DDX60LQ5H9U9 1706 aaKnown RBP11.53□□□□□ -0.56
TUBB-208ENST00000396389 STX17P56962 302 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 GRIN1Q05586 938 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 DCAF15Q66K64 600 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 ATL3Q6DD88 541 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 TMEM179Q6ZVK1 233 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 LDHDQ86WU2 507 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 IQUBQ8NA54 791 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 MED15Q96RN5 788 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 FBXO28Q9NVF7 368 aa11.53□□□□□ -0.56
TUBB-208ENST00000396389 ROBO3Q96MS0 1386 aa11.52□□□□□ -0.56
TUBB-208ENST00000396389 IVLP07476 585 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 TBX2Q13207 712 aaPredicted RBP11.52□□□□□ -0.57
TUBB-208ENST00000396389 RTN1Q16799 776 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 NOM1Q5C9Z4 860 aaKnown RBP11.52□□□□□ -0.57
TUBB-208ENST00000396389 CST9Q5W186 159 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 NCAPH2Q6IBW4 605 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 SLC35F6Q8N357 371 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 FANCBQ8NB91 859 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 ACRBPQ8NEB7 543 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 TUBE1Q9UJT0 475 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 CSADQ9Y600 493 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 PSME4Q14997 1843 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 HTTP42858 3142 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 F5H6K3 240 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 IRF6O14896 467 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 STX10O60499 249 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 SLC1A4P43007 532 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 LIG3P49916 1009 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 KIF23Q02241 960 aaPredicted RBP11.52□□□□□ -0.57
TUBB-208ENST00000396389 KLRC3Q07444 240 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 TROAPQ12815 778 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 SPECC1LQ69YQ0 1117 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 KANSL2Q9H9L4 492 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 ABT1Q9ULW3 272 aaKnown RBP11.52□□□□□ -0.57
TUBB-208ENST00000396389 CDK5RAP2Q96SN8 1893 aa11.52□□□□□ -0.57
TUBB-208ENST00000396389 KIF3CO14782 793 aa11.51□□□□□ -0.57
TUBB-208ENST00000396389 YEATS4O95619 227 aa11.51□□□□□ -0.57
TUBB-208ENST00000396389 ASNSP08243 561 aa11.51□□□□□ -0.57
TUBB-208ENST00000396389 CASP1P29466 404 aa11.51□□□□□ -0.57
TUBB-208ENST00000396389 CORO7P57737 925 aa11.51□□□□□ -0.57
TUBB-208ENST00000396389 FAM83BQ5T0W9 1011 aa11.51□□□□□ -0.57
TUBB-208ENST00000396389 TTC19Q6DKK2 380 aaPredicted RBP11.51□□□□□ -0.57
TUBB-208ENST00000396389 KLHL10Q6JEL2 608 aa11.51□□□□□ -0.57
TUBB-208ENST00000396389 GSPT2Q8IYD1 628 aaKnown RBP11.51□□□□□ -0.57
TUBB-208ENST00000396389 CTCFLQ8NI51 663 aaPredicted RBP11.51□□□□□ -0.57
TUBB-208ENST00000396389 ZC3H15Q8WU90 426 aaKnown RBP11.51□□□□□ -0.57
TUBB-208ENST00000396389 TFR2Q9UP52 801 aa11.51□□□□□ -0.57
TUBB-208ENST00000396389 V9GY48 417 aaPredicted RBP11.51□□□□□ -0.57
TUBB-208ENST00000396389 DNAH12Q6ZR08 3092 aa11.51□□□□□ -0.57
TUBB-208ENST00000396389 ATP2B1P20020 1258 aa11.51□□□□□ -0.57
TUBB-208ENST00000396389 HUNKP57058 714 aa11.51□□□□□ -0.57
TUBB-208ENST00000396389 RBL2Q08999 1139 aa11.51□□□□□ -0.57
TUBB-208ENST00000396389 HSP90B2PQ58FF3 399 aa11.51□□□□□ -0.57
TUBB-208ENST00000396389 TANGO6Q9C0B7 1094 aa11.51□□□□□ -0.57
TUBB-208ENST00000396389 CDC23Q9UJX2 597 aa11.51□□□□□ -0.57
TUBB-208ENST00000396389 NPM3O75607 178 aaKnown RBP11.5□□□□□ -0.57
TUBB-208ENST00000396389 NDUFB10O96000 172 aa11.5□□□□□ -0.57
TUBB-208ENST00000396389 PTPRAP18433 802 aa11.5□□□□□ -0.57
TUBB-208ENST00000396389 CDC25AP30304 524 aa11.5□□□□□ -0.57
TUBB-208ENST00000396389 AKAP17AQ02040 695 aaKnown RBP11.5□□□□□ -0.57
TUBB-208ENST00000396389 SLC39A14Q15043 492 aa11.5□□□□□ -0.57
TUBB-208ENST00000396389 SLFN13Q68D06 897 aa11.5□□□□□ -0.57
TUBB-208ENST00000396389 CHADLQ6NUI6 762 aa11.5□□□□□ -0.57
TUBB-208ENST00000396389 GPKOWQ92917 476 aaPredicted RBP eCLIP11.5□□□□□ -0.57
TUBB-208ENST00000396389 ZNF274Q96GC6 653 aaPredicted RBP11.5□□□□□ -0.57
TUBB-208ENST00000396389 CCDC17Q96LX7 622 aa11.5□□□□□ -0.57
TUBB-208ENST00000396389 FAM217BQ9NTX9 383 aaPredicted RBP11.5□□□□□ -0.57
TUBB-208ENST00000396389 GEMIN8Q9NWZ8 242 aaKnown RBP11.5□□□□□ -0.57
TUBB-208ENST00000396389 ADGRG1Q9Y653 693 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms