RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 GOLGA8DPQ0D2H9 430 aa16.77■□□□□ 0.27
CBX3-202ENST00000396386 KCNJ12Q14500 433 aa16.77■□□□□ 0.27
CBX3-202ENST00000396386 LARP4BQ92615 738 aaKnown RBP16.77■□□□□ 0.27
CBX3-202ENST00000396386 HAS1Q92839 578 aa16.77■□□□□ 0.27
CBX3-202ENST00000396386 DHTKD1Q96HY7 919 aaPredicted RBP16.77■□□□□ 0.27
CBX3-202ENST00000396386 BLOC1S4Q9NUP1 217 aa16.77■□□□□ 0.27
CBX3-202ENST00000396386 TMX2Q9Y320 296 aa16.77■□□□□ 0.27
CBX3-202ENST00000396386 PAXBP1Q9Y5B6 917 aa16.77■□□□□ 0.27
CBX3-202ENST00000396386 ITIH6Q6UXX5 1313 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 MEIS2O14770 477 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 TEX33O43247 280 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 TBC1D12O60347 775 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 STAT2P52630 851 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 SNAP25P60880 206 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 CXCL9Q07325 125 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 USH1GQ495M9 461 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 TCP11X2Q5H9J9 407 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 TMEM139Q8IV31 216 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 TC2NQ8N9U0 490 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 RAD54LQ92698 747 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 MBOAT7Q96N66 472 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 CYP3A7-CYP3A51PA0A087WV96 503 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 TRIM49BA6NDI0 452 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 RIOK3O14730 519 aaKnown RBP16.76■□□□□ 0.27
CBX3-202ENST00000396386 ARHGAP6O43182 974 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 CYP3A7P24462 503 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 CCT6AP40227 531 aaKnown RBP16.76■□□□□ 0.27
CBX3-202ENST00000396386 ECE1P42892 770 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 MMP14P50281 582 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 COPB1P53618 953 aaKnown RBP16.76■□□□□ 0.27
CBX3-202ENST00000396386 TRAF1Q13077 416 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 DALRD3Q5D0E6 543 aaKnown RBP16.76■□□□□ 0.27
CBX3-202ENST00000396386 CIAPIN1Q6FI81 312 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 CNNM4Q6P4Q7 775 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 PPFIBP1Q86W92 1011 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 SPICE1Q8N0Z3 855 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 NOC3LQ8WTT2 800 aaKnown RBP16.76■□□□□ 0.27
CBX3-202ENST00000396386 ZBED3Q96IU2 234 aaPredicted RBP16.76■□□□□ 0.27
CBX3-202ENST00000396386 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 BAG1Q99933 345 aaPredicted RBP16.76■□□□□ 0.27
CBX3-202ENST00000396386 LRRC27Q9C0I9 530 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 TMEM39BQ9GZU3 492 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 TAOK3Q9H2K8 898 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 SH2D4AQ9H788 454 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 PRR12Q9ULL5 1215 aa16.76■□□□□ 0.27
CBX3-202ENST00000396386 SPDYE3A6NKU9 549 aa16.75■□□□□ 0.27
CBX3-202ENST00000396386 SLC26A4O43511 780 aa16.75■□□□□ 0.27
CBX3-202ENST00000396386 ZBTB7AO95365 584 aa16.75■□□□□ 0.27
CBX3-202ENST00000396386 FOSP01100 380 aaPredicted RBP16.75■□□□□ 0.27
CBX3-202ENST00000396386 POLD1P28340 1107 aa16.75■□□□□ 0.27
CBX3-202ENST00000396386 ARHGAP4P98171 946 aa16.75■□□□□ 0.27
CBX3-202ENST00000396386 MCM6Q14566 821 aa16.75■□□□□ 0.27
CBX3-202ENST00000396386 COBLL1Q53SF7 1204 aa16.75■□□□□ 0.27
CBX3-202ENST00000396386 THAP9Q9H5L6 903 aa16.75■□□□□ 0.27
CBX3-202ENST00000396386 KCNMB3Q9NPA1 279 aa16.75■□□□□ 0.27
CBX3-202ENST00000396386 TAB2Q9NYJ8 693 aa16.75■□□□□ 0.27
CBX3-202ENST00000396386 PCDHA12Q9UN75 941 aa16.75■□□□□ 0.27
CBX3-202ENST00000396386 BICDL2A1A5D9 508 aa16.74■□□□□ 0.27
CBX3-202ENST00000396386 AKR1B15C9JRZ8 316 aaPredicted RBP16.74■□□□□ 0.27
CBX3-202ENST00000396386 N4BP3O15049 544 aa16.74■□□□□ 0.27
CBX3-202ENST00000396386 STX10O60499 249 aa16.74■□□□□ 0.27
CBX3-202ENST00000396386 UNC13DQ70J99 1090 aa16.74■□□□□ 0.27
CBX3-202ENST00000396386 TEX2Q8IWB9 1127 aa16.74■□□□□ 0.27
CBX3-202ENST00000396386 ACER1Q8TDN7 264 aa16.74■□□□□ 0.27
CBX3-202ENST00000396386 CRYGNQ8WXF5 182 aa16.74■□□□□ 0.27
CBX3-202ENST00000396386 JDP2Q8WYK2 163 aa16.74■□□□□ 0.27
CBX3-202ENST00000396386 PVALEFA0A1B0GWK0 134 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 MYMKA6NI61 221 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 LRRC10BA6NIK2 292 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 CCNE1P24864 410 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 EEF1GP26641 437 aaKnown RBP16.73■□□□□ 0.27
CBX3-202ENST00000396386 HOXA7P31268 230 aaPredicted RBP16.73■□□□□ 0.27
CBX3-202ENST00000396386 SREBF1P36956 1147 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 ADKP55263 362 aaKnown RBP16.73■□□□□ 0.27
CBX3-202ENST00000396386 HYIQ5T013 277 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 FAM83BQ5T0W9 1011 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 TTI2Q6NXR4 508 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 SLFN12Q8IYM2 578 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 ZNF592Q92610 1267 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 P2RX5Q93086 422 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 PANX2Q96RD6 677 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 NT5C3AQ9H0P0 336 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 TPM1P09493 284 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 PMS1P54277 932 aaKnown RBP16.73■□□□□ 0.27
CBX3-202ENST00000396386 TRIM14Q14142 442 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 CDAN1Q8IWY9 1227 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 NUDT12Q9BQG2 462 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 VPS16Q9H269 839 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 VCPKMTQ9H867 229 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 MYOZ2Q9NPC6 264 aa16.73■□□□□ 0.27
CBX3-202ENST00000396386 MAGEC2Q9UBF1 373 aaPredicted RBP16.73■□□□□ 0.27
CBX3-202ENST00000396386 WNT10BO00744 389 aa16.72■□□□□ 0.27
CBX3-202ENST00000396386 ZSCAN12O43309 604 aa16.72■□□□□ 0.27
CBX3-202ENST00000396386 MFAP3LO75121 409 aa16.72■□□□□ 0.27
CBX3-202ENST00000396386 TUBB4AP04350 444 aa16.72■□□□□ 0.27
CBX3-202ENST00000396386 CAP2P40123 477 aa16.72■□□□□ 0.27
CBX3-202ENST00000396386 TNIP1Q15025 636 aa16.72■□□□□ 0.27
CBX3-202ENST00000396386 KIAA1755Q5JYT7 1200 aa16.72■□□□□ 0.27
CBX3-202ENST00000396386 MTFR1LQ9H019 292 aa16.72■□□□□ 0.27
CBX3-202ENST00000396386 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.72■□□□□ 0.271e-9■■■□□ 15.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms