RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 RNF14Q9UBS8 474 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 SEPT9Q9UHD8 586 aaPredicted RBP5.95□□□□□ -1.46
VPS13C-204ENST00000395898 PPP2R2CQ9Y2T4 447 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 A0A1W2PQ27 194 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 A0A1W2PQ64 194 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 A0A1W2PQD8 194 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 GREM2Q9H772 168 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.95□□□□□ -1.46
VPS13C-204ENST00000395898 RFX1P22670 979 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 ZMYM1Q5SVZ6 1142 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 PPP4R3CPQ6ZMV5 832 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 SERPINB13Q9UIV8 391 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 HNRNPDLO14979 420 aaKnown RBP5.95□□□□□ -1.46
VPS13C-204ENST00000395898 GSTA1P08263 222 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 GSTA2P09210 222 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 ATF2P15336 505 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 PTH1RQ03431 593 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 PSMD2Q13200 908 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 PRKG1Q13976 671 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 SLC39A14Q15043 492 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 DBN1Q16643 649 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 TTLL7Q6ZT98 887 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 FNBP4Q8N3X1 1017 aaPredicted RBP5.95□□□□□ -1.46
VPS13C-204ENST00000395898 CALR3Q96L12 384 aaKnown RBP5.95□□□□□ -1.46
VPS13C-204ENST00000395898 FANCLQ9NW38 375 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 ZNF148Q9UQR1 794 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 JRKLQ9Y4A0 524 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 TTC36A6NLP5 189 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 EVI5O60447 810 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 ETF1P62495 437 aaKnown RBP5.95□□□□□ -1.46
VPS13C-204ENST00000395898 POLA2Q14181 598 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 ZNF658Q5TYW1 1059 aaPredicted RBP5.95□□□□□ -1.46
VPS13C-204ENST00000395898 DONSONQ9NYP3 566 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 ERVV-1B6SEH8 477 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 IKBKBO14920 756 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 ZNF500O60304 480 aaPredicted RBP5.95□□□□□ -1.46
VPS13C-204ENST00000395898 INHBAP08476 426 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 NR2F2P24468 414 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 MYL7Q01449 175 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 PHLDB3Q6NSJ2 640 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 EFCAB13Q8IY85 973 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 KANSL2Q9H9L4 492 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 SLC39A2Q9NP94 309 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 PI4KBQ9UBF8 816 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 ZNF215Q9UL58 517 aaPredicted RBP5.95□□□□□ -1.46
VPS13C-204ENST00000395898 PCDHA7Q9UN72 937 aa5.95□□□□□ -1.46
VPS13C-204ENST00000395898 PPEF1O14829 653 aaPredicted RBP5.94□□□□□ -1.46
VPS13C-204ENST00000395898 OSBPP22059 807 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 BFSP1Q12934 665 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 ALCAMQ13740 583 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 SLFN13Q68D06 897 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 ANKFY1Q9P2R3 1169 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 IQGAP3Q86VI3 1631 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 BUB1O43683 1085 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 PPFIA2O75334 1257 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 H2AFZP0C0S5 128 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 H2AFVQ71UI9 128 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 SDCCAG3Q96C92 435 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 SLC12A6Q9UHW9 1150 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 MTMR6Q9Y217 621 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 THRAP3Q9Y2W1 955 aaKnown RBP5.94□□□□□ -1.46
VPS13C-204ENST00000395898 ABL1P00519 1130 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 FAM71BQ8TC56 605 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 EDC3Q96F86 508 aaKnown RBP5.94□□□□□ -1.46
VPS13C-204ENST00000395898 PLEKHF1Q96S99 279 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 SUGCTQ9HAC7 445 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 TARBP1Q13395 1621 aaKnown RBP5.94□□□□□ -1.46
VPS13C-204ENST00000395898 RPAP1Q9BWH6 1393 aaPredicted RBP5.94□□□□□ -1.46
VPS13C-204ENST00000395898 SPDYE16A6NNV3 312 aaPredicted RBP5.94□□□□□ -1.46
VPS13C-204ENST00000395898 TCP10L2B9ZVM9 353 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 SGK1O00141 431 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 ADD2P35612 726 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 SURF1Q15526 300 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 SPDYE2Q495Y8 402 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 KAZNQ674X7 775 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 UBE2Q2Q8WVN8 375 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 CAPS2Q9BXY5 557 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 BAG5Q9UL15 447 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 CDK12Q9NYV4 1490 aaPredicted RBP5.94□□□□□ -1.46
VPS13C-204ENST00000395898 MUM1Q2TAK8 710 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 TRIM42Q8IWZ5 723 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 NT5C1BQ96P26 610 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 BCS1LQ9Y276 419 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 PRDM15P57071 1507 aaPredicted RBP5.94□□□□□ -1.46
VPS13C-204ENST00000395898 TMEM232C9JQI7 657 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 AFPP02771 609 aaKnown RBP5.94□□□□□ -1.46
VPS13C-204ENST00000395898 BSPRYQ5W0U4 402 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 FAM196AQ6ZSG2 479 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 PNMA8AQ86V59 439 aaPredicted RBP5.94□□□□□ -1.46
VPS13C-204ENST00000395898 NME8Q8N427 588 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 MGARPQ8TDB4 240 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 LRRC8CQ8TDW0 803 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 MAP2P11137 1827 aaKnown RBP5.94□□□□□ -1.46
VPS13C-204ENST00000395898 TRPM1Q7Z4N2 1603 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 HIP1RO75146 1068 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 ABCA8O94911 1581 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 CCND2P30279 289 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 RAPH1Q70E73 1250 aa5.94□□□□□ -1.46
VPS13C-204ENST00000395898 BZW1Q7L1Q6 419 aaKnown RBP5.94□□□□□ -1.46
VPS13C-204ENST00000395898 DPP9Q86TI2 863 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms