RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 WDR11Q9BZH6 1224 aa16.4■□□□□ 0.22
VCPKMT-201ENST00000395859 FAM86C1Q9NVL1 165 aa16.4■□□□□ 0.22
VCPKMT-201ENST00000395859 MBTPS2O43462 519 aa16.39■□□□□ 0.21
VCPKMT-201ENST00000395859 EFCAB14O75071 495 aa16.39■□□□□ 0.21
VCPKMT-201ENST00000395859 PARNO95453 639 aaKnown RBP16.39■□□□□ 0.21
VCPKMT-201ENST00000395859 ADD2P35612 726 aa16.39■□□□□ 0.21
VCPKMT-201ENST00000395859 DLX2Q07687 328 aaPredicted RBP16.39■□□□□ 0.21
VCPKMT-201ENST00000395859 MUM1L1Q5H9M0 696 aa16.39■□□□□ 0.21
VCPKMT-201ENST00000395859 LRRC8DQ7L1W4 858 aa16.39■□□□□ 0.21
VCPKMT-201ENST00000395859 GMCL1P1Q8NEA9 526 aa16.39■□□□□ 0.21
VCPKMT-201ENST00000395859 PBXIP1Q96AQ6 731 aa16.39■□□□□ 0.21
VCPKMT-201ENST00000395859 TRERF1Q96PN7 1200 aa16.39■□□□□ 0.21
VCPKMT-201ENST00000395859 POP1Q99575 1024 aaKnown RBP16.39■□□□□ 0.21
VCPKMT-201ENST00000395859 INSL6Q9Y581 213 aa16.39■□□□□ 0.21
VCPKMT-201ENST00000395859 CTDP1Q9Y5B0 961 aaPredicted RBP16.39■□□□□ 0.21
VCPKMT-201ENST00000395859 MBTPS1Q14703 1052 aa16.38■□□□□ 0.21
VCPKMT-201ENST00000395859 PTGISQ16647 500 aa16.38■□□□□ 0.21
VCPKMT-201ENST00000395859 FBXL6Q8N531 539 aa16.38■□□□□ 0.21
VCPKMT-201ENST00000395859 NSUN3Q9H649 340 aaKnown RBP16.38■□□□□ 0.21
VCPKMT-201ENST00000395859 CLIP2Q9UDT6 1046 aa16.38■□□□□ 0.21
VCPKMT-201ENST00000395859 LOC102724159A0A0B4J2E5 919 aa16.37■□□□□ 0.21
VCPKMT-201ENST00000395859 GOLIM4O00461 696 aa16.37■□□□□ 0.21
VCPKMT-201ENST00000395859 KPNA6O60684 536 aa16.37■□□□□ 0.21
VCPKMT-201ENST00000395859 CHGBP05060 677 aa16.37■□□□□ 0.21
VCPKMT-201ENST00000395859 PWP2Q15269 919 aaKnown RBP16.37■□□□□ 0.21
VCPKMT-201ENST00000395859 GDF6Q6KF10 455 aaPredicted RBP16.37■□□□□ 0.21
VCPKMT-201ENST00000395859 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.37■□□□□ 0.21
VCPKMT-201ENST00000395859 RPAINQ86UA6 219 aa16.37■□□□□ 0.21
VCPKMT-201ENST00000395859 OR6J1Q8NGC5 347 aa16.37■□□□□ 0.21
VCPKMT-201ENST00000395859 SAMD11Q96NU1 681 aa16.37■□□□□ 0.21
VCPKMT-201ENST00000395859 CLDND1Q9NY35 253 aa16.37■□□□□ 0.21
VCPKMT-201ENST00000395859 NCK2O43639 380 aa16.36■□□□□ 0.21
VCPKMT-201ENST00000395859 CKBP12277 381 aa16.36■□□□□ 0.21
VCPKMT-201ENST00000395859 VCPP55072 806 aaKnown RBP16.36■□□□□ 0.21
VCPKMT-201ENST00000395859 TRIM71Q2Q1W2 868 aaKnown RBP16.36■□□□□ 0.21
VCPKMT-201ENST00000395859 SBK1Q52WX2 424 aa16.36■□□□□ 0.21
VCPKMT-201ENST00000395859 AACSQ86V21 672 aa16.36■□□□□ 0.21
VCPKMT-201ENST00000395859 AMOTL1Q8IY63 956 aa16.36■□□□□ 0.21
VCPKMT-201ENST00000395859 CCDC155Q8N6L0 562 aa16.36■□□□□ 0.21
VCPKMT-201ENST00000395859 GPHNQ9NQX3 736 aaPredicted RBP16.36■□□□□ 0.21
VCPKMT-201ENST00000395859 MTMR4Q9NYA4 1195 aa16.36■□□□□ 0.21
VCPKMT-201ENST00000395859 NLRC5Q86WI3 1866 aa16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 NCOR2Q9Y618 2525 aa16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 TMEM232C9JQI7 657 aa16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 NKRFO15226 690 aaKnown RBP eCLIP16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 PLA2G6O60733 806 aa16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 BMP3P12645 472 aa16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 ALDH5A1P51649 535 aaPredicted RBP16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 ZXDAP98168 799 aa16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 SMAD4Q13485 552 aaKnown RBP16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 GPM6BQ13491 265 aa16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 IKBKEQ14164 716 aa16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 CBX2Q14781 532 aaPredicted RBP16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 FAM117BQ6P1L5 589 aa16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 ASCL5Q7RTU5 278 aa16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 SUGP1Q8IWZ8 645 aaKnown RBP16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 KAT2BQ92831 832 aa16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 ASIC4Q96FT7 647 aa16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 CEP95Q96GE4 821 aa16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 ARPP21Q9UBL0 812 aaPredicted RBP16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 NOD1Q9Y239 953 aa16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 FRYLO94915 3013 aa16.35■□□□□ 0.21
VCPKMT-201ENST00000395859 RALGAPA2Q2PPJ7 1873 aa16.34■□□□□ 0.21
VCPKMT-201ENST00000395859 TBX10O75333 385 aa16.34■□□□□ 0.21
VCPKMT-201ENST00000395859 ALAS1P13196 640 aa16.34■□□□□ 0.21
VCPKMT-201ENST00000395859 STAT2P52630 851 aa16.34■□□□□ 0.21
VCPKMT-201ENST00000395859 LRRC47Q8N1G4 583 aaKnown RBP16.34■□□□□ 0.21
VCPKMT-201ENST00000395859 COPS5Q92905 334 aa16.34■□□□□ 0.21
VCPKMT-201ENST00000395859 IRF2BPLQ9H1B7 796 aa16.34■□□□□ 0.21
VCPKMT-201ENST00000395859 C1orf115Q9H7X2 142 aa16.34■□□□□ 0.21
VCPKMT-201ENST00000395859 SLC4A4Q9Y6R1 1079 aa16.34■□□□□ 0.21
VCPKMT-201ENST00000395859 LOC730098B7Z3J9 87 aa16.33■□□□□ 0.2
VCPKMT-201ENST00000395859 LINC00271P0C7V0 271 aa16.33■□□□□ 0.2
VCPKMT-201ENST00000395859 EDNRBP24530 442 aa16.33■□□□□ 0.2
VCPKMT-201ENST00000395859 HYAL1Q12794 435 aa16.33■□□□□ 0.2
VCPKMT-201ENST00000395859 UBE3CQ15386 1083 aa16.33■□□□□ 0.2
VCPKMT-201ENST00000395859 BRDTQ58F21 947 aaPredicted RBP16.33■□□□□ 0.2
VCPKMT-201ENST00000395859 SLFN13Q68D06 897 aa16.33■□□□□ 0.2
VCPKMT-201ENST00000395859 FAM160B2Q86V87 743 aa16.33■□□□□ 0.2
VCPKMT-201ENST00000395859 FBXO11Q86XK2 927 aa16.33■□□□□ 0.2
VCPKMT-201ENST00000395859 TMEM192Q8IY95 271 aa16.33■□□□□ 0.2
VCPKMT-201ENST00000395859 TMEM57Q8N5G2 664 aa16.33■□□□□ 0.2
VCPKMT-201ENST00000395859 STAG1Q8WVM7 1258 aa16.33■□□□□ 0.2
VCPKMT-201ENST00000395859 ATOH1Q92858 354 aaPredicted RBP16.33■□□□□ 0.2
VCPKMT-201ENST00000395859 WNT8BQ93098 351 aa16.33■□□□□ 0.2
VCPKMT-201ENST00000395859 PLIN4Q96Q06 1357 aa16.33■□□□□ 0.2
VCPKMT-201ENST00000395859 PRR23AA6NEV1 266 aa16.32■□□□□ 0.2
VCPKMT-201ENST00000395859 STXBP3O00186 592 aa16.32■□□□□ 0.2
VCPKMT-201ENST00000395859 LGR5O75473 907 aa16.32■□□□□ 0.2
VCPKMT-201ENST00000395859 EYA4O95677 639 aa16.32■□□□□ 0.2
VCPKMT-201ENST00000395859 TTLL1O95922 423 aa16.32■□□□□ 0.2
VCPKMT-201ENST00000395859 AVPR2P30518 371 aa16.32■□□□□ 0.2
VCPKMT-201ENST00000395859 CHURC1Q8WUH1 139 aa16.32■□□□□ 0.2
VCPKMT-201ENST00000395859 GMCL1Q96IK5 515 aa16.32■□□□□ 0.2
VCPKMT-201ENST00000395859 MSLNLQ96KJ4 702 aa16.32■□□□□ 0.2
VCPKMT-201ENST00000395859 CRBNQ96SW2 442 aa16.32■□□□□ 0.2
VCPKMT-201ENST00000395859 DNAJC2Q99543 621 aaKnown RBP16.32■□□□□ 0.2
VCPKMT-201ENST00000395859 PUS7LQ9H0K6 701 aaKnown RBP16.32■□□□□ 0.2
VCPKMT-201ENST00000395859 ADD3Q9UEY8 706 aaKnown RBP16.32■□□□□ 0.2
VCPKMT-201ENST00000395859 GTF2IRD1Q9UHL9 959 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms