RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 HIPK3Q9H422 1215 aa21.03■□□□□ 0.96
CXCL12-204ENST00000395793 POLR3EQ9NVU0 708 aa21.03■□□□□ 0.96
CXCL12-204ENST00000395793 SCN5AQ14524 2016 aa21.03■□□□□ 0.96
CXCL12-204ENST00000395793 PALM3A6NDB9 673 aaPredicted RBP21.02■□□□□ 0.96
CXCL12-204ENST00000395793 KLRF2D3W0D1 207 aa21.02■□□□□ 0.96
CXCL12-204ENST00000395793 E7EWF7 191 aa21.02■□□□□ 0.96
CXCL12-204ENST00000395793 CPT1AP50416 773 aa21.02■□□□□ 0.96
CXCL12-204ENST00000395793 ANTXR2P58335 489 aa21.02■□□□□ 0.96
CXCL12-204ENST00000395793 CCDC62Q6P9F0 684 aa21.02■□□□□ 0.96
CXCL12-204ENST00000395793 ZNF365Q70YC5 407 aa21.02■□□□□ 0.96
CXCL12-204ENST00000395793 VWCEQ96DN2 955 aa21.02■□□□□ 0.96
CXCL12-204ENST00000395793 ALDH8A1Q9H2A2 487 aaPredicted RBP21.02■□□□□ 0.96
CXCL12-204ENST00000395793 U3KPZ7 1027 aaPredicted RBP21.02■□□□□ 0.96
CXCL12-204ENST00000395793 CDH23Q9H251 3354 aa21.02■□□□□ 0.96
CXCL12-204ENST00000395793 TANC1Q9C0D5 1861 aa21.01■□□□□ 0.95
CXCL12-204ENST00000395793 A6NJR5 290 aa21.01■□□□□ 0.95
CXCL12-204ENST00000395793 NKRFO15226 690 aaKnown RBP eCLIP21.01■□□□□ 0.95
CXCL12-204ENST00000395793 TXNP10599 105 aaKnown RBP21.01■□□□□ 0.95
CXCL12-204ENST00000395793 GRM4Q14833 912 aa21.01■□□□□ 0.95
CXCL12-204ENST00000395793 CHST3Q7LGC8 479 aa21.01■□□□□ 0.95
CXCL12-204ENST00000395793 MPHOSPH6Q99547 160 aaKnown RBP21.01■□□□□ 0.95
CXCL12-204ENST00000395793 MAF1Q9H063 256 aa21.01■□□□□ 0.95
CXCL12-204ENST00000395793 IL23AQ9NPF7 189 aa21.01■□□□□ 0.95
CXCL12-204ENST00000395793 TRMT13Q9NUP7 481 aaKnown RBP21.01■□□□□ 0.95
CXCL12-204ENST00000395793 MRPL11Q9Y3B7 192 aaKnown RBP21.01■□□□□ 0.95
CXCL12-204ENST00000395793 HSFX4A0A1B0GTS1 333 aaPredicted RBP21■□□□□ 0.95
CXCL12-204ENST00000395793 HSFX3A0A1B0GWH4 333 aaPredicted RBP21■□□□□ 0.95
CXCL12-204ENST00000395793 GRXCR1A8MXD5 290 aa21■□□□□ 0.95
CXCL12-204ENST00000395793 DNAJB2P25686 324 aa21■□□□□ 0.95
CXCL12-204ENST00000395793 CCL23P55773 120 aa21■□□□□ 0.95
CXCL12-204ENST00000395793 GHRHRQ02643 423 aa21■□□□□ 0.95
CXCL12-204ENST00000395793 TRDNQ13061 729 aa21■□□□□ 0.95
CXCL12-204ENST00000395793 TTLL4Q14679 1199 aa21■□□□□ 0.95
CXCL12-204ENST00000395793 MCF2L2Q86YR7 1114 aa21■□□□□ 0.95
CXCL12-204ENST00000395793 NSUN6Q8TEA1 469 aaKnown RBP21■□□□□ 0.95
CXCL12-204ENST00000395793 MYLIPQ8WY64 445 aa21■□□□□ 0.95
CXCL12-204ENST00000395793 RMDN3Q96TC7 470 aa21■□□□□ 0.95
CXCL12-204ENST00000395793 MTG1Q9BT17 334 aaPredicted RBP21■□□□□ 0.95
CXCL12-204ENST00000395793 AMNQ9BXJ7 453 aa21■□□□□ 0.95
CXCL12-204ENST00000395793 SEZ6LQ9BYH1 1024 aa21■□□□□ 0.95
CXCL12-204ENST00000395793 MYH7BA7E2Y1 1941 aa21■□□□□ 0.95
CXCL12-204ENST00000395793 IFIT3O14879 490 aaKnown RBP20.99■□□□□ 0.95
CXCL12-204ENST00000395793 CYTH3O43739 400 aa20.99■□□□□ 0.95
CXCL12-204ENST00000395793 CFBP00751 764 aa20.99■□□□□ 0.95
CXCL12-204ENST00000395793 CYP2C9P11712 490 aa20.99■□□□□ 0.95
CXCL12-204ENST00000395793 EIF2AK2P19525 551 aaKnown RBP20.99■□□□□ 0.95
CXCL12-204ENST00000395793 HSD17B4P51659 736 aa20.99■□□□□ 0.95
CXCL12-204ENST00000395793 COL9A3Q14050 684 aaPredicted RBP20.99■□□□□ 0.95
CXCL12-204ENST00000395793 LY6KQ17RY6 165 aa20.99■□□□□ 0.95
CXCL12-204ENST00000395793 NBPF20Q3BBV1 942 aa20.99■□□□□ 0.95
CXCL12-204ENST00000395793 PSRC1Q6PGN9 363 aaPredicted RBP20.99■□□□□ 0.95
CXCL12-204ENST00000395793 SEPT14Q6ZU15 432 aa20.99■□□□□ 0.95
CXCL12-204ENST00000395793 MB21D2Q8IYB1 491 aaPredicted RBP20.99■□□□□ 0.95
CXCL12-204ENST00000395793 MAP4K1Q92918 833 aa20.99■□□□□ 0.95
CXCL12-204ENST00000395793 CXXC1Q9P0U4 656 aaPredicted RBP20.99■□□□□ 0.95
CXCL12-204ENST00000395793 RBM8AQ9Y5S9 174 aaKnown RBP20.99■□□□□ 0.95
CXCL12-204ENST00000395793 TMEM265A0A087WTH1 108 aa20.98■□□□□ 0.95
CXCL12-204ENST00000395793 B4DLN1 442 aa20.98■□□□□ 0.95
CXCL12-204ENST00000395793 ZBTB5O15062 677 aa20.98■□□□□ 0.95
CXCL12-204ENST00000395793 PBX2P40425 430 aa20.98■□□□□ 0.95
CXCL12-204ENST00000395793 MRPL12P52815 198 aaKnown RBP20.98■□□□□ 0.95
CXCL12-204ENST00000395793 ARHGAP1Q07960 439 aa20.98■□□□□ 0.95
CXCL12-204ENST00000395793 TROAPQ12815 778 aa20.98■□□□□ 0.95
CXCL12-204ENST00000395793 NCOA7Q8NI08 942 aa20.98■□□□□ 0.95
CXCL12-204ENST00000395793 SCLYQ96I15 445 aa20.98■□□□□ 0.95
CXCL12-204ENST00000395793 PIGSQ96S52 555 aa20.98■□□□□ 0.95
CXCL12-204ENST00000395793 RIOX1Q9H6W3 641 aa20.98■□□□□ 0.95
CXCL12-204ENST00000395793 PXMP2Q9NR77 195 aa20.98■□□□□ 0.95
CXCL12-204ENST00000395793 WTAPQ15007 396 aa20.97■□□□□ 0.95
CXCL12-204ENST00000395793 ARHGEF16Q5VV41 709 aa20.97■□□□□ 0.95
CXCL12-204ENST00000395793 RALYLQ86SE5 291 aaKnown RBP20.97■□□□□ 0.95
CXCL12-204ENST00000395793 SKAP1Q86WV1 359 aa20.97■□□□□ 0.95
CXCL12-204ENST00000395793 HOMER1Q86YM7 354 aa20.97■□□□□ 0.95
CXCL12-204ENST00000395793 AFG1LQ8WV93 481 aa20.97■□□□□ 0.95
CXCL12-204ENST00000395793 HERVK_113Q902F9 699 aa20.97■□□□□ 0.95
CXCL12-204ENST00000395793 IWS1Q96ST2 819 aa20.97■□□□□ 0.95
CXCL12-204ENST00000395793 PBX4Q9BYU1 374 aa20.97■□□□□ 0.95
CXCL12-204ENST00000395793 GPHNQ9NQX3 736 aaPredicted RBP20.97■□□□□ 0.95
CXCL12-204ENST00000395793 NR3C2P08235 984 aa20.96■□□□□ 0.95
CXCL12-204ENST00000395793 MMP3P08254 477 aa20.96■□□□□ 0.95
CXCL12-204ENST00000395793 GRIN2CQ14957 1233 aa20.96■□□□□ 0.95
CXCL12-204ENST00000395793 STXBP2Q15833 593 aa20.96■□□□□ 0.95
CXCL12-204ENST00000395793 FAM47CQ5HY64 1035 aa20.96■□□□□ 0.95
CXCL12-204ENST00000395793 IL31RAQ8NI17 732 aa20.96■□□□□ 0.95
CXCL12-204ENST00000395793 IGDCC4Q8TDY8 1250 aa20.96■□□□□ 0.95
CXCL12-204ENST00000395793 PCDHA1Q9Y5I3 950 aa20.96■□□□□ 0.95
CXCL12-204ENST00000395793 TRIP12Q14669 1992 aaPredicted RBP20.96■□□□□ 0.95
CXCL12-204ENST00000395793 EYSQ5T1H1 3165 aa20.95■□□□□ 0.94
CXCL12-204ENST00000395793 RGS20O76081 388 aa20.95■□□□□ 0.94
CXCL12-204ENST00000395793 GH1P01241 217 aa20.95■□□□□ 0.94
CXCL12-204ENST00000395793 HOXA13P31271 388 aaPredicted RBP20.95■□□□□ 0.94
CXCL12-204ENST00000395793 BRDTQ58F21 947 aaPredicted RBP20.95■□□□□ 0.94
CXCL12-204ENST00000395793 TMEM67Q5HYA8 995 aa20.95■□□□□ 0.94
CXCL12-204ENST00000395793 OTOP2Q7RTS6 562 aa20.95■□□□□ 0.94
CXCL12-204ENST00000395793 PDCD2LQ9BRP1 358 aa20.95■□□□□ 0.94
CXCL12-204ENST00000395793 LSG1Q9H089 658 aaKnown RBP20.95■□□□□ 0.94
CXCL12-204ENST00000395793 DDX41Q9UJV9 622 aaKnown RBP20.95■□□□□ 0.94
CXCL12-204ENST00000395793 TET1Q8NFU7 2136 aa20.95■□□□□ 0.94
CXCL12-204ENST00000395793 ERICH2A1L162 156 aa20.94■□□□□ 0.94
CXCL12-204ENST00000395793 DLL1O00548 723 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms