RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 PDLIM1O00151 329 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 PAFAH1B1P43034 410 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 RASSF7Q02833 373 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 RETREG2Q8NC44 543 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 SPIRE2Q8WWL2 714 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 AFF2P51816 1311 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 MYH10P35580 1976 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 CPLX1O14810 134 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 MMEP08473 750 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 PSMC4P43686 418 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 PEX5P50542 639 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 RCN2Q14257 317 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 MUM1Q2TAK8 710 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 KRT71Q3SY84 523 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 EXOC3L1Q86VI1 746 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 NME9Q86XW9 330 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 KLHL7Q8IXQ5 586 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 SUPT20HQ8NEM7 779 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 WHAMMQ8TF30 809 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 KCNN1Q92952 543 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 IFT43Q96FT9 208 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 EEF2KMTQ96G04 330 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 GBP5Q96PP8 586 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 ESF1Q9H501 851 aaKnown RBP13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 HELLSQ9NRZ9 838 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 SCOCQ9UIL1 159 aa13.75□□□□□ -0.21
SLC28A1-203ENST00000394573 MYH7P12883 1935 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 ANO9A1A5B4 782 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 TMEM221A6NGB7 291 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 USO1O60763 962 aaKnown RBP13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 GNAZP19086 355 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 RXRAP19793 462 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 KIF5AQ12840 1032 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 BTG3Q14201 252 aaPredicted RBP13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 CDKAL1Q5VV42 579 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 USPL1Q5W0Q7 1092 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 C14orf80Q86SX3 495 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 NBPF15Q8N660 670 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 DNAJC9Q8WXX5 260 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 MKL1Q969V6 931 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 CTAGE1Q96RT6 745 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 NACA2Q9H009 215 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 GDF3Q9NR23 364 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 TMEM98Q9Y2Y6 226 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 HYOU1Q9Y4L1 999 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 ARHGAP5Q13017 1502 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 MYH13Q9UKX3 1938 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 NPHP3-ACAD11A0A0J9YXS1 232 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 E2F6O75461 281 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 CHN1P15882 459 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 KCNA3P22001 575 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 CACNA2D1P54289 1103 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 PABPC4Q13310 644 aaKnown RBP eCLIP13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 TAF7Q15545 349 aaPredicted RBP13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 TSR1Q2NL82 804 aaKnown RBP13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 INTUQ9ULD6 942 aa13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 LUC7L2Q9Y383 392 aaKnown RBP13.74□□□□□ -0.21
SLC28A1-203ENST00000394573 FLT3P36888 993 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 CCNG1P51959 295 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 COPB1P53618 953 aaKnown RBP13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 KRT83P78385 493 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 SEPT2Q15019 361 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 SLF2Q8IX21 1173 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 KLHDC4Q8TBB5 520 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 FAM129AQ9BZQ8 928 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 AGPAT5Q9NUQ2 364 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 TSKSQ9UJT2 592 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 GOLGA8BA8MQT2 603 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 UBE2Q2LH0YL09 131 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 ANXA1P04083 346 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 PLEKP08567 350 aaPredicted RBP13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 CNPY1Q3B7I2 92 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 ERMARDQ5T6L9 678 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 DUS1LQ6P1R4 473 aaKnown RBP13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 ZNF317Q96PQ6 595 aaPredicted RBP13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 ZFYVE9O95405 1425 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 ASXL2Q76L83 1435 aa13.73□□□□□ -0.21
SLC28A1-203ENST00000394573 CDC42BPGQ6DT37 1551 aa13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 H0YGN5 161 aa13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 LSM1O15116 133 aaKnown RBP13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 MAGEB3O15480 346 aa13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 NDUFB5O43674 189 aa13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 TMCC1O94876 653 aa13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 UBTFL6P0CB48 400 aaPredicted RBP13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 ZCCHC18P0CG32 403 aa13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 GM2AP17900 193 aa13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 ERCC5P28715 1186 aaPredicted RBP13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 PTDSS1P48651 473 aaKnown RBP13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 COPS2P61201 443 aa13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 TTF1Q15361 905 aaPredicted RBP13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 ARHGAP18Q8N392 663 aa13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 CTNNBL1Q8WYA6 563 aaPredicted RBP13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 PRMT1Q99873 361 aaKnown RBP13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 NHEJ1Q9H9Q4 299 aaPredicted RBP13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 PAIP2BQ9ULR5 123 aaKnown RBP13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 NFS1Q9Y697 457 aa13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 BUB1O43683 1085 aa13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 CYP1A1P04798 512 aaPredicted RBP13.72□□□□□ -0.21
SLC28A1-203ENST00000394573 GBP1P32455 592 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms