RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 COL22A1Q8NFW1 1626 aaPredicted RBP11.07□□□□□ -0.64
PSEN1-204ENST00000394164 SMCO2A6NFE2 343 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 MPHOSPH10O00566 681 aaKnown RBP11.06□□□□□ -0.64
PSEN1-204ENST00000394164 RPN1P04843 607 aaKnown RBP11.06□□□□□ -0.64
PSEN1-204ENST00000394164 GYPCP04921 128 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 PDHBP11177 359 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 PMS1P54277 932 aaKnown RBP11.06□□□□□ -0.64
PSEN1-204ENST00000394164 BIRC2Q13490 618 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 NEDD9Q14511 834 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 KRT31Q15323 416 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 PDXDC2PQ6P474 469 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 MIEF2Q96C03 454 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 SHOX2O60902 331 aaPredicted RBP11.06□□□□□ -0.64
PSEN1-204ENST00000394164 GYS1P13807 737 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 SLC16A2P36021 539 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 APBA1Q02410 837 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 SF3A3Q12874 501 aaKnown RBP eCLIP11.06□□□□□ -0.64
PSEN1-204ENST00000394164 CCDC178Q5BJE1 867 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 SH3RF1Q7Z6J0 888 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 DGKHQ86XP1 1220 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 SPATA20Q8TB22 786 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 LRRC15Q8TF66 581 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 HDAC7Q8WUI4 952 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 GSDMAQ96QA5 445 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 VEZTQ9HBM0 779 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 LEMD3Q9Y2U8 911 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 A0A1B0GUL6 1792 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 FLT1P17948 1338 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 PARP1P09874 1014 aaKnown RBP11.06□□□□□ -0.64
PSEN1-204ENST00000394164 PCP11498 1178 aaKnown RBP11.06□□□□□ -0.64
PSEN1-204ENST00000394164 CALML3P27482 149 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 ERCC5P28715 1186 aaPredicted RBP11.06□□□□□ -0.64
PSEN1-204ENST00000394164 TXKP42681 527 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 MSL1Q68DK7 614 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 MSL3Q8N5Y2 521 aaKnown RBP11.06□□□□□ -0.64
PSEN1-204ENST00000394164 TRIML1Q8N9V2 468 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 GJD4Q96KN9 370 aaPredicted RBP11.06□□□□□ -0.64
PSEN1-204ENST00000394164 VIPAS39Q9H9C1 493 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 SMARCAL1Q9NZC9 954 aa11.06□□□□□ -0.64
PSEN1-204ENST00000394164 TTF2Q9UNY4 1162 aaKnown RBP11.06□□□□□ -0.64
PSEN1-204ENST00000394164 A0A1B0GTH6 734 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 STXBP3O00186 592 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 SEC24CP53992 1094 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 GSTO1P78417 241 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 AMPD2Q01433 879 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 GUCY1A3Q02108 690 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 IFT88Q13099 833 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 PAK1Q13153 545 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 GRM4Q14833 912 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 FILIP1LQ4L180 1135 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 APTXQ7Z2E3 356 aaKnown RBP11.05□□□□□ -0.64
PSEN1-204ENST00000394164 KCNQ5Q9NR82 932 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 PCDHAC2Q9Y5I4 1007 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 LAMB2P55268 1798 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 IRS2Q9Y4H2 1338 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 G3V3G9 751 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 LDHCP07864 332 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 FNTAP49354 379 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 UBXN1Q04323 297 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 TCP10Q12799 353 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 SHROOM1Q2M3G4 852 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-204ENST00000394164 DCAF8Q5TAQ9 597 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 DPP8Q6V1X1 898 aaPredicted RBP11.05□□□□□ -0.64
PSEN1-204ENST00000394164 C4orf32Q8N8J7 132 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 TBC1D16Q8TBP0 767 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 RNF217Q8TC41 542 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 SGSM3Q96HU1 749 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 JADE2Q9NQC1 790 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 ADD3Q9UEY8 706 aaKnown RBP11.05□□□□□ -0.64
PSEN1-204ENST00000394164 MCM8Q9UJA3 840 aa11.05□□□□□ -0.64
PSEN1-204ENST00000394164 TNRC6CQ9HCJ0 1690 aaKnown RBP11.04□□□□□ -0.64
PSEN1-204ENST00000394164 KCNJ18B7U540 433 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 PDE2AO00408 941 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-204ENST00000394164 PPP1R12BO60237 982 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-204ENST00000394164 BMP15O95972 392 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 CLNS1AP54105 237 aaKnown RBP11.04□□□□□ -0.64
PSEN1-204ENST00000394164 DDR1Q08345 913 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 KCNJ12Q14500 433 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 TXNRD1Q16881 649 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 CEP85LQ5SZL2 805 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 RUFY1Q96T51 708 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 DISC1Q9NRI5 854 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 KLC4Q9NSK0 619 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 SEC63Q9UGP8 760 aaKnown RBP11.04□□□□□ -0.64
PSEN1-204ENST00000394164 SAR1BQ9Y6B6 198 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 COL5A3P25940 1745 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-204ENST00000394164 AFF2P51816 1311 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 SCN7AQ01118 1682 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 NKRFO15226 690 aaKnown RBP eCLIP11.04□□□□□ -0.64
PSEN1-204ENST00000394164 GTPBP6O43824 516 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-204ENST00000394164 KCTD19Q17RG1 926 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-204ENST00000394164 NAALADL2Q58DX5 795 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 CCDC122Q5T0U0 273 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 SOGA3Q5TF21 947 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 DYMQ7RTS9 669 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 TBCKQ8TEA7 893 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 PCMTD1Q96MG8 357 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-204ENST00000394164 BARHL2Q9NY43 387 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 MYH8P13535 1937 aa11.04□□□□□ -0.64
PSEN1-204ENST00000394164 BACH1O14867 736 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms