RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CMTR1Q8N1G2 835 aaKnown RBP35.6■■■■□ 3.29
CMTM4-202ENST00000394106 GLT1D1Q96MS3 346 aa35.6■■■■□ 3.29
CMTM4-202ENST00000394106 GDF15Q99988 308 aa35.6■■■■□ 3.29
CMTM4-202ENST00000394106 PRDM5Q9NQX1 630 aaPredicted RBP35.6■■■■□ 3.29
CMTM4-202ENST00000394106 RBM47A0AV96 593 aaKnown RBP35.59■■■■□ 3.29
CMTM4-202ENST00000394106 EIF2AK2P19525 551 aaKnown RBP35.59■■■■□ 3.29
CMTM4-202ENST00000394106 HOXA13P31271 388 aaPredicted RBP35.59■■■■□ 3.29
CMTM4-202ENST00000394106 NKX3-2P78367 333 aa35.59■■■■□ 3.29
CMTM4-202ENST00000394106 TLE2Q04725 743 aa35.59■■■■□ 3.29
CMTM4-202ENST00000394106 SRBD1Q8N5C6 995 aaKnown RBP35.59■■■■□ 3.29
CMTM4-202ENST00000394106 KCNB2Q92953 911 aa35.59■■■■□ 3.29
CMTM4-202ENST00000394106 SEC63Q9UGP8 760 aaKnown RBP35.59■■■■□ 3.29
CMTM4-202ENST00000394106 Q9Y3F1 56 aa35.59■■■■□ 3.29
CMTM4-202ENST00000394106 HMGB1P09429 215 aaKnown RBP35.58■■■■□ 3.29
CMTM4-202ENST00000394106 SMARCA1P28370 1054 aa35.58■■■■□ 3.29
CMTM4-202ENST00000394106 FANCBQ8NB91 859 aa35.58■■■■□ 3.29
CMTM4-202ENST00000394106 JAKMIP1Q96N16 626 aaKnown RBP35.58■■■■□ 3.29
CMTM4-202ENST00000394106 SNX14Q9Y5W7 946 aa35.58■■■■□ 3.29
CMTM4-202ENST00000394106 PQBP1O60828 265 aaKnown RBP35.57■■■■□ 3.28
CMTM4-202ENST00000394106 CPA1P15085 419 aa35.57■■■■□ 3.28
CMTM4-202ENST00000394106 MDM2Q00987 491 aaPredicted RBP35.57■■■■□ 3.28
CMTM4-202ENST00000394106 GHRHRQ02643 423 aa35.57■■■■□ 3.28
CMTM4-202ENST00000394106 PPP2R5BQ15173 497 aa35.57■■■■□ 3.28
CMTM4-202ENST00000394106 SCFD2Q8WU76 684 aa35.57■■■■□ 3.28
CMTM4-202ENST00000394106 IWS1Q96ST2 819 aa35.57■■■■□ 3.28
CMTM4-202ENST00000394106 PXMP2Q9NR77 195 aa35.57■■■■□ 3.28
CMTM4-202ENST00000394106 GCOM1H8Y6P7 765 aaPredicted RBP35.56■■■■□ 3.28
CMTM4-202ENST00000394106 POLR2MP0CAP2 368 aa35.56■■■■□ 3.28
CMTM4-202ENST00000394106 APOA5Q6Q788 366 aa35.56■■■■□ 3.28
CMTM4-202ENST00000394106 CCDC82Q8N4S0 544 aa35.56■■■■□ 3.28
CMTM4-202ENST00000394106 MAP3K20Q9NYL2 800 aaKnown RBP35.56■■■■□ 3.28
CMTM4-202ENST00000394106 ELP1O95163 1332 aa35.56■■■■□ 3.28
CMTM4-202ENST00000394106 ZEB2O60315 1214 aa35.55■■■■□ 3.28
CMTM4-202ENST00000394106 FGD1P98174 961 aa35.55■■■■□ 3.28
CMTM4-202ENST00000394106 STXBP2Q15833 593 aa35.55■■■■□ 3.28
CMTM4-202ENST00000394106 CXCL17Q6UXB2 119 aa35.55■■■■□ 3.28
CMTM4-202ENST00000394106 SAMD3Q8N6K7 520 aa35.55■■■■□ 3.28
CMTM4-202ENST00000394106 PDLIM7Q9NR12 457 aa35.55■■■■□ 3.28
CMTM4-202ENST00000394106 BRPF3Q9ULD4 1205 aa35.55■■■■□ 3.28
CMTM4-202ENST00000394106 SEPT14Q6ZU15 432 aa35.54■■■■□ 3.28
CMTM4-202ENST00000394106 TMTC3Q6ZXV5 915 aa35.54■■■■□ 3.28
CMTM4-202ENST00000394106 OR6J1Q8NGC5 347 aa35.54■■■■□ 3.28
CMTM4-202ENST00000394106 LBHD1Q9BQE6 289 aaPredicted RBP35.54■■■■□ 3.28
CMTM4-202ENST00000394106 NR3C2P08235 984 aa35.53■■■■□ 3.28
CMTM4-202ENST00000394106 TXNP10599 105 aaKnown RBP35.53■■■■□ 3.28
CMTM4-202ENST00000394106 BMP8BP34820 402 aa35.53■■■■□ 3.28
CMTM4-202ENST00000394106 TTLL4Q14679 1199 aa35.53■■■■□ 3.28
CMTM4-202ENST00000394106 SH3RF1Q7Z6J0 888 aa35.53■■■■□ 3.28
CMTM4-202ENST00000394106 FCHSD1Q86WN1 690 aa35.53■■■■□ 3.28
CMTM4-202ENST00000394106 TRIOBPQ9H2D6 2365 aa35.53■■■■□ 3.28
CMTM4-202ENST00000394106 A0A0U1RQG5 324 aaPredicted RBP35.52■■■■□ 3.28
CMTM4-202ENST00000394106 ZBTB43O43298 467 aa35.52■■■■□ 3.28
CMTM4-202ENST00000394106 BLOC1S2Q6QNY1 142 aa35.52■■■■□ 3.28
CMTM4-202ENST00000394106 COPS5Q92905 334 aa35.52■■■■□ 3.28
CMTM4-202ENST00000394106 UBE2OQ9C0C9 1292 aaKnown RBP35.52■■■■□ 3.28
CMTM4-202ENST00000394106 NAP1L2Q9ULW6 460 aaPredicted RBP35.52■■■■□ 3.28
CMTM4-202ENST00000394106 KLF18A0A0U1RQI7 1052 aa35.51■■■■□ 3.28
CMTM4-202ENST00000394106 hCG_1642624A0A1W2PR95 340 aa35.51■■■■□ 3.28
CMTM4-202ENST00000394106 NKRFO15226 690 aaKnown RBP eCLIP35.51■■■■□ 3.28
CMTM4-202ENST00000394106 CLTBP09497 229 aa35.51■■■■□ 3.28
CMTM4-202ENST00000394106 MYCLP12524 364 aaPredicted RBP35.51■■■■□ 3.28
CMTM4-202ENST00000394106 KIAA1217Q5T5P2 1943 aa35.51■■■■□ 3.27
CMTM4-202ENST00000394106 LTBP2Q14767 1821 aa35.5■■■■□ 3.27
CMTM4-202ENST00000394106 DCDC2CA8MYV0 355 aa35.5■■■■□ 3.27
CMTM4-202ENST00000394106 ARIH2O95376 493 aa35.5■■■■□ 3.27
CMTM4-202ENST00000394106 RTN1Q16799 776 aa35.5■■■■□ 3.27
CMTM4-202ENST00000394106 ANKRD33Q7Z3H0 272 aa35.5■■■■□ 3.27
CMTM4-202ENST00000394106 PDCD2LQ9BRP1 358 aa35.5■■■■□ 3.27
CMTM4-202ENST00000394106 RBM28Q9NW13 759 aaKnown RBP35.5■■■■□ 3.27
CMTM4-202ENST00000394106 A0A1W2PPC1 479 aa35.49■■■■□ 3.27
CMTM4-202ENST00000394106 TRIM43BA6NCK2 446 aa35.49■■■■□ 3.27
CMTM4-202ENST00000394106 EIF3JO75822 258 aaKnown RBP35.49■■■■□ 3.27
CMTM4-202ENST00000394106 CABYRO75952 493 aa35.49■■■■□ 3.27
CMTM4-202ENST00000394106 CPT1AP50416 773 aa35.49■■■■□ 3.27
CMTM4-202ENST00000394106 FXR1P51114 621 aaKnown RBP eCLIP35.49■■■■□ 3.27
CMTM4-202ENST00000394106 Q6ZUG5 572 aa35.49■■■■□ 3.27
CMTM4-202ENST00000394106 TRIM43Q96BQ3 446 aaPredicted RBP35.49■■■■□ 3.27
CMTM4-202ENST00000394106 GOLGA8AA7E2F4 631 aa35.48■■■■□ 3.27
CMTM4-202ENST00000394106 GOLGA8BA8MQT2 603 aa35.48■■■■□ 3.27
CMTM4-202ENST00000394106 ARVCFO00192 962 aa35.48■■■■□ 3.27
CMTM4-202ENST00000394106 PGM5Q15124 567 aa35.48■■■■□ 3.27
CMTM4-202ENST00000394106 TOX2Q96NM4 488 aa35.48■■■■□ 3.27
CMTM4-202ENST00000394106 MROH7Q68CQ1 1323 aa35.48■■■■□ 3.27
CMTM4-202ENST00000394106 MYL3P08590 195 aa35.47■■■■□ 3.27
CMTM4-202ENST00000394106 CASTP20810 708 aaKnown RBP35.47■■■■□ 3.27
CMTM4-202ENST00000394106 PSMA5P28066 241 aa35.47■■■■□ 3.27
CMTM4-202ENST00000394106 CDK7P50613 346 aa35.47■■■■□ 3.27
CMTM4-202ENST00000394106 LY6KQ17RY6 165 aa35.47■■■■□ 3.27
CMTM4-202ENST00000394106 CCDC62Q6P9F0 684 aa35.47■■■■□ 3.27
CMTM4-202ENST00000394106 IL31RAQ8NI17 732 aa35.47■■■■□ 3.27
CMTM4-202ENST00000394106 TMEM39AQ9NV64 488 aa35.47■■■■□ 3.27
CMTM4-202ENST00000394106 EPB41L2O43491 1005 aaKnown RBP35.46■■■■□ 3.27
CMTM4-202ENST00000394106 RPS6KB1P23443 525 aa35.46■■■■□ 3.27
CMTM4-202ENST00000394106 APOBRQ0VD83 1088 aa35.46■■■■□ 3.27
CMTM4-202ENST00000394106 FAAP100Q0VG06 881 aa35.46■■■■□ 3.27
CMTM4-202ENST00000394106 BRDTQ58F21 947 aaPredicted RBP35.46■■■■□ 3.27
CMTM4-202ENST00000394106 SMARCC2Q8TAQ2 1214 aa35.46■■■■□ 3.27
CMTM4-202ENST00000394106 CUL5Q93034 780 aa35.46■■■■□ 3.27
CMTM4-202ENST00000394106 USP26Q9BXU7 913 aa35.46■■■■□ 3.27
CMTM4-202ENST00000394106 PSMC6P62333 389 aa35.45■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms