RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 NOC4LQ9BVI4 516 aaKnown RBP21.3■■□□□ 1
PDLIM7-205ENST00000393551 WNT8AQ9H1J5 351 aa21.3■■□□□ 1
PDLIM7-205ENST00000393551 A6NJR5 290 aa21.29■■□□□ 1
PDLIM7-205ENST00000393551 SGSM2O43147 1006 aa21.29■■□□□ 1
PDLIM7-205ENST00000393551 PPP2R5BQ15173 497 aa21.29■■□□□ 1
PDLIM7-205ENST00000393551 CCDC62Q6P9F0 684 aa21.29■■□□□ 1
PDLIM7-205ENST00000393551 STOX1Q6ZVD7 989 aa21.29■■□□□ 1
PDLIM7-205ENST00000393551 FBXO11Q86XK2 927 aa21.29■■□□□ 1
PDLIM7-205ENST00000393551 PPP1R13LQ8WUF5 828 aa21.29■■□□□ 1
PDLIM7-205ENST00000393551 SEZ6LQ9BYH1 1024 aa21.29■■□□□ 1
PDLIM7-205ENST00000393551 MAF1Q9H063 256 aa21.29■■□□□ 1
PDLIM7-205ENST00000393551 ALDH8A1Q9H2A2 487 aaPredicted RBP21.29■■□□□ 1
PDLIM7-205ENST00000393551 HIPK3Q9H422 1215 aa21.29■■□□□ 1
PDLIM7-205ENST00000393551 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.28■■□□□ 1
PDLIM7-205ENST00000393551 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.28■■□□□ 1
PDLIM7-205ENST00000393551 PALM3A6NDB9 673 aaPredicted RBP21.28■■□□□ 1
PDLIM7-205ENST00000393551 GRXCR1A8MXD5 290 aa21.28■■□□□ 1
PDLIM7-205ENST00000393551 KLRF2D3W0D1 207 aa21.28■■□□□ 1
PDLIM7-205ENST00000393551 MYL3P08590 195 aa21.28■■□□□ 1
PDLIM7-205ENST00000393551 TXNP10599 105 aaKnown RBP21.28■■□□□ 1
PDLIM7-205ENST00000393551 CPT1AP50416 773 aa21.28■■□□□ 1
PDLIM7-205ENST00000393551 IL23AQ9NPF7 189 aa21.28■■□□□ 1
PDLIM7-205ENST00000393551 TRMT13Q9NUP7 481 aaKnown RBP21.28■■□□□ 1
PDLIM7-205ENST00000393551 POLR3EQ9NVU0 708 aa21.28■■□□□ 1
PDLIM7-205ENST00000393551 GBF1Q92538 1859 aa21.27■■□□□ 1
PDLIM7-205ENST00000393551 NKRFO15226 690 aaKnown RBP eCLIP21.27■■□□□ 1
PDLIM7-205ENST00000393551 DHX16O60231 1041 aaKnown RBP21.27■■□□□ 1
PDLIM7-205ENST00000393551 CCL23P55773 120 aa21.27■■□□□ 1
PDLIM7-205ENST00000393551 RUFY2Q8WXA3 655 aa21.27■■□□□ 1
PDLIM7-205ENST00000393551 MYLIPQ8WY64 445 aa21.27■■□□□ 1
PDLIM7-205ENST00000393551 MPHOSPH6Q99547 160 aaKnown RBP21.27■■□□□ 1
PDLIM7-205ENST00000393551 CXXC1Q9P0U4 656 aaPredicted RBP21.27■■□□□ 1
PDLIM7-205ENST00000393551 MRPL11Q9Y3B7 192 aaKnown RBP21.27■■□□□ 1
PDLIM7-205ENST00000393551 SCN5AQ14524 2016 aa21.27■■□□□ 1
PDLIM7-205ENST00000393551 MYO9BQ13459 2157 aa21.27■■□□□ 1
PDLIM7-205ENST00000393551 E7EWF7 191 aa21.26■□□□□ 0.99
PDLIM7-205ENST00000393551 DNAJB2P25686 324 aa21.26■□□□□ 0.99
PDLIM7-205ENST00000393551 PBX2P40425 430 aa21.26■□□□□ 0.99
PDLIM7-205ENST00000393551 GHRHRQ02643 423 aa21.26■□□□□ 0.99
PDLIM7-205ENST00000393551 NBPF20Q3BBV1 942 aa21.26■□□□□ 0.99
PDLIM7-205ENST00000393551 CHST3Q7LGC8 479 aa21.26■□□□□ 0.99
PDLIM7-205ENST00000393551 MCF2L2Q86YR7 1114 aa21.26■□□□□ 0.99
PDLIM7-205ENST00000393551 NSUN6Q8TEA1 469 aaKnown RBP21.26■□□□□ 0.99
PDLIM7-205ENST00000393551 MAP4K1Q92918 833 aa21.26■□□□□ 0.99
PDLIM7-205ENST00000393551 RMDN3Q96TC7 470 aa21.26■□□□□ 0.99
PDLIM7-205ENST00000393551 MTG1Q9BT17 334 aaPredicted RBP21.26■□□□□ 0.99
PDLIM7-205ENST00000393551 U3KPZ7 1027 aaPredicted RBP21.26■□□□□ 0.99
PDLIM7-205ENST00000393551 SPTBN5Q9NRC6 3674 aaKnown RBP21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 TMEM265A0A087WTH1 108 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 DLL1O00548 723 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 CYP2C9P11712 490 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 HSD17B4P51659 736 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 ANTXR2P58335 489 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 TRDNQ13061 729 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 TTLL4Q14679 1199 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 GRM4Q14833 912 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 GRIN2CQ14957 1233 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 LY6KQ17RY6 165 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 PSRC1Q6PGN9 363 aaPredicted RBP21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 SEPT14Q6ZU15 432 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 HERVK_113Q902F9 699 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 IWS1Q96ST2 819 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 AMNQ9BXJ7 453 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 PBX4Q9BYU1 374 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 MYH7BA7E2Y1 1941 aa21.25■□□□□ 0.99
PDLIM7-205ENST00000393551 B4DLN1 442 aa21.24■□□□□ 0.99
PDLIM7-205ENST00000393551 IFIT3O14879 490 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-205ENST00000393551 ZBTB5O15062 677 aa21.24■□□□□ 0.99
PDLIM7-205ENST00000393551 CYTH3O43739 400 aa21.24■□□□□ 0.99
PDLIM7-205ENST00000393551 CFBP00751 764 aa21.24■□□□□ 0.99
PDLIM7-205ENST00000393551 MRPL12P52815 198 aaKnown RBP21.24■□□□□ 0.99
PDLIM7-205ENST00000393551 ARHGAP1Q07960 439 aa21.24■□□□□ 0.99
PDLIM7-205ENST00000393551 TROAPQ12815 778 aa21.24■□□□□ 0.99
PDLIM7-205ENST00000393551 COL9A3Q14050 684 aaPredicted RBP21.24■□□□□ 0.99
PDLIM7-205ENST00000393551 SCLYQ96I15 445 aa21.24■□□□□ 0.99
PDLIM7-205ENST00000393551 RIOX1Q9H6W3 641 aa21.24■□□□□ 0.99
PDLIM7-205ENST00000393551 PXMP2Q9NR77 195 aa21.24■□□□□ 0.99
PDLIM7-205ENST00000393551 EIF2AK2P19525 551 aaKnown RBP21.23■□□□□ 0.99
PDLIM7-205ENST00000393551 STXBP2Q15833 593 aa21.23■□□□□ 0.99
PDLIM7-205ENST00000393551 MB21D2Q8IYB1 491 aaPredicted RBP21.23■□□□□ 0.99
PDLIM7-205ENST00000393551 NCOA7Q8NI08 942 aa21.23■□□□□ 0.99
PDLIM7-205ENST00000393551 IGDCC4Q8TDY8 1250 aa21.23■□□□□ 0.99
PDLIM7-205ENST00000393551 AFG1LQ8WV93 481 aa21.23■□□□□ 0.99
PDLIM7-205ENST00000393551 PIGSQ96S52 555 aa21.23■□□□□ 0.99
PDLIM7-205ENST00000393551 GPHNQ9NQX3 736 aaPredicted RBP21.23■□□□□ 0.99
PDLIM7-205ENST00000393551 TRIP12Q14669 1992 aaPredicted RBP21.23■□□□□ 0.99
PDLIM7-205ENST00000393551 REV3LO60673 3130 aa21.22■□□□□ 0.99
PDLIM7-205ENST00000393551 TET1Q8NFU7 2136 aa21.22■□□□□ 0.99
PDLIM7-205ENST00000393551 RGS20O76081 388 aa21.22■□□□□ 0.99
PDLIM7-205ENST00000393551 FGBP02675 491 aa21.22■□□□□ 0.99
PDLIM7-205ENST00000393551 NR3C2P08235 984 aa21.22■□□□□ 0.99
PDLIM7-205ENST00000393551 ARHGEF16Q5VV41 709 aa21.22■□□□□ 0.99
PDLIM7-205ENST00000393551 NFRKBQ6P4R8 1299 aa21.22■□□□□ 0.99
PDLIM7-205ENST00000393551 OTOP2Q7RTS6 562 aa21.22■□□□□ 0.99
PDLIM7-205ENST00000393551 KAT2BQ92831 832 aa21.22■□□□□ 0.99
PDLIM7-205ENST00000393551 TIFAQ96CG3 184 aa21.22■□□□□ 0.99
PDLIM7-205ENST00000393551 ZNF576Q9H609 170 aa21.22■□□□□ 0.99
PDLIM7-205ENST00000393551 DDX41Q9UJV9 622 aaKnown RBP21.22■□□□□ 0.99
PDLIM7-205ENST00000393551 PCDHA1Q9Y5I3 950 aa21.22■□□□□ 0.99
PDLIM7-205ENST00000393551 RBM8AQ9Y5S9 174 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms