RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 GPKOWQ92917 476 aaPredicted RBP eCLIP8.97□□□□□ -0.97
ATXN3-203ENST00000393287 MRIQ9BWK5 157 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 GBA2Q9HCG7 927 aaPredicted RBP8.97□□□□□ -0.97
ATXN3-203ENST00000393287 RIC8AQ9NPQ8 531 aa8.97□□□□□ -0.97
ATXN3-203ENST00000393287 TNFAIP3P21580 790 aa8.96□□□□□ -0.97
ATXN3-203ENST00000393287 SPP2Q13103 211 aa8.96□□□□□ -0.97
ATXN3-203ENST00000393287 UTP14CQ5TAP6 766 aaKnown RBP8.96□□□□□ -0.97
ATXN3-203ENST00000393287 METTL13Q8N6R0 699 aa8.96□□□□□ -0.97
ATXN3-203ENST00000393287 OTUD5Q96G74 571 aa8.96□□□□□ -0.97
ATXN3-203ENST00000393287 KATNAL1Q9BW62 490 aa8.96□□□□□ -0.97
ATXN3-203ENST00000393287 FLT1P17948 1338 aa8.96□□□□□ -0.97
ATXN3-203ENST00000393287 KIF5AQ12840 1032 aa8.96□□□□□ -0.97
ATXN3-203ENST00000393287 HS1BP3Q53T59 392 aa8.96□□□□□ -0.97
ATXN3-203ENST00000393287 SPOUT1Q5T280 376 aaKnown RBP8.96□□□□□ -0.97
ATXN3-203ENST00000393287 ZNF280CQ8ND82 737 aa8.96□□□□□ -0.97
ATXN3-203ENST00000393287 SMC1BQ8NDV3 1235 aa8.96□□□□□ -0.97
ATXN3-203ENST00000393287 NSUN7Q8NE18 718 aaKnown RBP8.96□□□□□ -0.97
ATXN3-203ENST00000393287 ZC3H15Q8WU90 426 aaKnown RBP8.96□□□□□ -0.97
ATXN3-203ENST00000393287 SREK1Q8WXA9 508 aaKnown RBP8.96□□□□□ -0.97
ATXN3-203ENST00000393287 ANAPC4Q9UJX5 808 aa8.96□□□□□ -0.97
ATXN3-203ENST00000393287 ECM2O94769 699 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-203ENST00000393287 SLFN12LQ6IEE8 588 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 PPP4R3CPQ6ZMV5 832 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 TXNRD3Q86VQ6 643 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 MAIP1Q8WWC4 291 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 TMEM47Q9BQJ4 181 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.96□□□□□ -0.98
ATXN3-203ENST00000393287 SPZ1Q9BXG8 430 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 A0A1B0GVL5 298 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 GAS8O95995 478 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 FAM83BQ5T0W9 1011 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 MB21D2Q8IYB1 491 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-203ENST00000393287 DNAJC25Q9H1X3 360 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 CGNQ9P2M7 1197 aaKnown RBP8.96□□□□□ -0.98
ATXN3-203ENST00000393287 SEPT9Q9UHD8 586 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-203ENST00000393287 NEFHP12036 1026 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 EEF2P13639 858 aaKnown RBP8.96□□□□□ -0.98
ATXN3-203ENST00000393287 TECP42680 631 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 KIAA0753Q2KHM9 967 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 LRP10Q7Z4F1 713 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 SGMS1Q86VZ5 419 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 METTL23Q86XA0 190 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 NLGN2Q8NFZ4 835 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 NELFBQ8WX92 580 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 CTNNBL1Q8WYA6 563 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-203ENST00000393287 LCMT1Q9UIC8 334 aa8.96□□□□□ -0.98
ATXN3-203ENST00000393287 ZHX1Q9UKY1 873 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-203ENST00000393287 AKR1B15C9JRZ8 316 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 ATP2A1O14983 1001 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 KRT5P13647 590 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 LMAN1P49257 510 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 SLC39A14Q15043 492 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 CCDC14Q49A88 953 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 DACT2Q5SW24 774 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 CYP26C1Q6V0L0 522 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 RPS6KC1Q96S38 1066 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 TSKSQ9UJT2 592 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 SSX2IPQ9Y2D8 614 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 SETD1AO15047 1707 aaKnown RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 TLR3O15455 904 aaKnown RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 KLRK1P26718 216 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 FAM83AQ86UY5 434 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 SCYL3Q8IZE3 742 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 SPICE1Q8N0Z3 855 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 UBXN4Q92575 508 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 CCDC102AQ96A19 550 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 ZC3H4Q9UPT8 1303 aaKnown RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 JAK2O60674 1132 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 USP11P51784 963 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 SEPT14Q6ZU15 432 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 FAM178BQ8IXR5 827 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 REM2Q8IYK8 340 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 SYCE1Q8N0S2 351 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 IPO4Q8TEX9 1081 aaKnown RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 JAKMIP2Q96AA8 810 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 C2orf40Q9H1Z8 148 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 CWC15Q9P013 229 aaKnown RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 GSG1L2A8MUP6 293 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 STK10O94804 968 aaKnown RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 LDHAP00338 332 aaKnown RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 BPIFB4P59827 614 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 SNW1Q13573 536 aaKnown RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 COG2Q14746 738 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 SNRNP48Q6IEG0 339 aaKnown RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 LARP4BQ92615 738 aaKnown RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 DHTKD1Q96HY7 919 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 ANKRD36BP1Q96IX9 119 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 MTUS1Q9ULD2 1270 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 TUBBP07437 444 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 VIL1P09327 827 aaKnown RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 CUL4AQ13619 759 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 TAF1CQ15572 869 aaPredicted RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 GSDMAQ96QA5 445 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 MAK16Q9BXY0 300 aaKnown RBP8.95□□□□□ -0.98
ATXN3-203ENST00000393287 FAM184BQ9ULE4 1060 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 DAAM1Q9Y4D1 1078 aa8.95□□□□□ -0.98
ATXN3-203ENST00000393287 ADD1P35611 737 aaKnown RBP8.94□□□□□ -0.98
ATXN3-203ENST00000393287 PRELPP51888 382 aa8.94□□□□□ -0.98
ATXN3-203ENST00000393287 SEL1L2Q5TEA6 688 aa8.94□□□□□ -0.98
ATXN3-203ENST00000393287 CHADLQ6NUI6 762 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms