RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 RASAL3Q86YV0 1011 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 CCAR1Q8IX12 1150 aaKnown RBP12.31□□□□□ -0.44
PDGFD-202ENST00000393158 FAM43AQ8N2R8 423 aa12.31□□□□□ -0.44
PDGFD-202ENST00000393158 ITGB5P18084 799 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 PRPHP41219 470 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 SEMA3FQ13275 785 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 LONRF3Q496Y0 759 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 Q4G0T1 1027 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 SYTL5Q8TDW5 730 aaPredicted RBP12.3□□□□□ -0.44
PDGFD-202ENST00000393158 VAV3Q9UKW4 847 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 VGLL3A8MV65 326 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 IGHA2P01877 340 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 CDC25AP30304 524 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 ARL6IP4Q66PJ3 421 aaKnown RBP12.3□□□□□ -0.44
PDGFD-202ENST00000393158 PDXDC2PQ6P474 469 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 CCDC12Q8WUD4 166 aaPredicted RBP12.3□□□□□ -0.44
PDGFD-202ENST00000393158 TELO2Q9Y4R8 837 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 CUTAO60888 179 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 FAM160A1Q05DH4 1040 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 AP3B2Q13367 1082 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 SAFBQ15424 915 aaKnown RBP eCLIP12.3□□□□□ -0.44
PDGFD-202ENST00000393158 KRI1Q8N9T8 703 aaKnown RBP12.3□□□□□ -0.44
PDGFD-202ENST00000393158 ERCC4Q92889 916 aaPredicted RBP12.3□□□□□ -0.44
PDGFD-202ENST00000393158 CSADQ9Y600 493 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 MYH11P35749 1972 aa12.3□□□□□ -0.44
PDGFD-202ENST00000393158 A0A087WWV3 80 aa12.29□□□□□ -0.44
PDGFD-202ENST00000393158 BTBD19C9JJ37 291 aa12.29□□□□□ -0.44
PDGFD-202ENST00000393158 DHX15O43143 795 aaKnown RBP12.29□□□□□ -0.44
PDGFD-202ENST00000393158 MOXD1Q6UVY6 613 aa12.29□□□□□ -0.44
PDGFD-202ENST00000393158 TEX2Q8IWB9 1127 aa12.29□□□□□ -0.44
PDGFD-202ENST00000393158 CLSTN2Q9H4D0 955 aa12.29□□□□□ -0.44
PDGFD-202ENST00000393158 RPS6P62753 249 aaKnown RBP12.29□□□□□ -0.44
PDGFD-202ENST00000393158 ARHGAP4P98171 946 aa12.29□□□□□ -0.44
PDGFD-202ENST00000393158 SKOR2Q2VWA4 1001 aaPredicted RBP12.29□□□□□ -0.44
PDGFD-202ENST00000393158 SYMPKQ92797 1274 aaKnown RBP12.29□□□□□ -0.44
PDGFD-202ENST00000393158 CYP39A1Q9NYL5 469 aa12.29□□□□□ -0.44
PDGFD-202ENST00000393158 CCPG1Q9ULG6 757 aa12.29□□□□□ -0.44
PDGFD-202ENST00000393158 DNAJC25-GNG10A0A024R161 153 aa12.29□□□□□ -0.44
PDGFD-202ENST00000393158 CCNT1O60563 726 aaKnown RBP12.29□□□□□ -0.44
PDGFD-202ENST00000393158 MBD3O95983 291 aa12.29□□□□□ -0.44
PDGFD-202ENST00000393158 ME1P48163 572 aa12.29□□□□□ -0.44
PDGFD-202ENST00000393158 USP11P51784 963 aa12.29□□□□□ -0.44
PDGFD-202ENST00000393158 A1CFQ9NQ94 594 aaKnown RBP12.29□□□□□ -0.44
PDGFD-202ENST00000393158 IGF2BP3O00425 579 aaKnown RBP eCLIP12.28□□□□□ -0.44
PDGFD-202ENST00000393158 HERVK_113P62684 666 aa12.28□□□□□ -0.44
PDGFD-202ENST00000393158 LETM2Q2VYF4 491 aa12.28□□□□□ -0.44
PDGFD-202ENST00000393158 BICD2Q8TD16 824 aa12.28□□□□□ -0.44
PDGFD-202ENST00000393158 GZF1Q9H116 711 aaPredicted RBP12.28□□□□□ -0.44
PDGFD-202ENST00000393158 CYP2C8P10632 490 aa12.28□□□□□ -0.44
PDGFD-202ENST00000393158 FXR2P51116 673 aaKnown RBP eCLIP12.28□□□□□ -0.44
PDGFD-202ENST00000393158 MRPS27Q92552 414 aaKnown RBP12.28□□□□□ -0.44
PDGFD-202ENST00000393158 BCAS3Q9H6U6 928 aa12.28□□□□□ -0.44
PDGFD-202ENST00000393158 FRMPD3Q5JV73 1810 aa12.28□□□□□ -0.44
PDGFD-202ENST00000393158 SYCE3A1L190 88 aa12.28□□□□□ -0.44
PDGFD-202ENST00000393158 PRR29P0C7W0 189 aa12.28□□□□□ -0.44
PDGFD-202ENST00000393158 SARSP49591 514 aaKnown RBP12.28□□□□□ -0.44
PDGFD-202ENST00000393158 ORC2Q13416 577 aaPredicted RBP12.28□□□□□ -0.44
PDGFD-202ENST00000393158 STK38Q15208 465 aa12.28□□□□□ -0.44
PDGFD-202ENST00000393158 NT5DC1Q5TFE4 455 aa12.28□□□□□ -0.44
PDGFD-202ENST00000393158 ARMC9Q7Z3E5 817 aa12.28□□□□□ -0.44
PDGFD-202ENST00000393158 TRERF1Q96PN7 1200 aa12.28□□□□□ -0.44
PDGFD-202ENST00000393158 TAAR1Q96RJ0 339 aa12.28□□□□□ -0.44
PDGFD-202ENST00000393158 MED15Q96RN5 788 aa12.28□□□□□ -0.44
PDGFD-202ENST00000393158 SLC45A1Q9Y2W3 748 aa12.28□□□□□ -0.44
PDGFD-202ENST00000393158 MYH9P35579 1960 aaKnown RBP12.28□□□□□ -0.44
PDGFD-202ENST00000393158 MSH4O15457 936 aa12.27□□□□□ -0.44
PDGFD-202ENST00000393158 ZNF202O95125 648 aa12.27□□□□□ -0.44
PDGFD-202ENST00000393158 ZBTB48P10074 688 aaPredicted RBP12.27□□□□□ -0.44
PDGFD-202ENST00000393158 MRPL12P52815 198 aaKnown RBP12.27□□□□□ -0.44
PDGFD-202ENST00000393158 FSIP1Q8NA03 581 aa12.27□□□□□ -0.44
PDGFD-202ENST00000393158 PNMA5Q96PV4 448 aa12.27□□□□□ -0.44
PDGFD-202ENST00000393158 CLEC11AQ9Y240 323 aa12.27□□□□□ -0.44
PDGFD-202ENST00000393158 TLL2Q9Y6L7 1015 aa12.27□□□□□ -0.44
PDGFD-202ENST00000393158 CCDC194A0A1B0GVG4 234 aa12.27□□□□□ -0.45
PDGFD-202ENST00000393158 ATP2B1P20020 1258 aa12.27□□□□□ -0.45
PDGFD-202ENST00000393158 PGM5Q15124 567 aa12.27□□□□□ -0.45
PDGFD-202ENST00000393158 KCNK18Q7Z418 384 aa12.27□□□□□ -0.45
PDGFD-202ENST00000393158 ZFP91Q96JP5 570 aaPredicted RBP12.27□□□□□ -0.45
PDGFD-202ENST00000393158 WRAP73Q9P2S5 460 aaPredicted RBP12.27□□□□□ -0.45
PDGFD-202ENST00000393158 ZHX1Q9UKY1 873 aaPredicted RBP12.27□□□□□ -0.45
PDGFD-202ENST00000393158 MEIS1O00470 390 aa12.27□□□□□ -0.45
PDGFD-202ENST00000393158 CTGFP29279 349 aa12.27□□□□□ -0.45
PDGFD-202ENST00000393158 SNRNP48Q6IEG0 339 aaKnown RBP12.27□□□□□ -0.45
PDGFD-202ENST00000393158 RIOX2Q8IUF8 465 aa12.27□□□□□ -0.45
PDGFD-202ENST00000393158 ELOA2Q8IYF1 753 aaPredicted RBP12.27□□□□□ -0.45
PDGFD-202ENST00000393158 ZNF408Q9H9D4 720 aa12.27□□□□□ -0.45
PDGFD-202ENST00000393158 CASP8AP2Q9UKL3 1982 aa12.27□□□□□ -0.45
PDGFD-202ENST00000393158 POTEFA5A3E0 1075 aa12.26□□□□□ -0.45
PDGFD-202ENST00000393158 VWA3AA6NCI4 1184 aa12.26□□□□□ -0.45
PDGFD-202ENST00000393158 EDNRBP24530 442 aa12.26□□□□□ -0.45
PDGFD-202ENST00000393158 CPXCR1Q8N123 301 aa12.26□□□□□ -0.45
PDGFD-202ENST00000393158 FERMT2Q96AC1 680 aa12.26□□□□□ -0.45
PDGFD-202ENST00000393158 MOV10L1Q9BXT6 1211 aaKnown RBP12.26□□□□□ -0.45
PDGFD-202ENST00000393158 HSD3B7Q9H2F3 369 aa12.26□□□□□ -0.45
PDGFD-202ENST00000393158 NEMFO60524 1076 aa12.26□□□□□ -0.45
PDGFD-202ENST00000393158 PSMD10O75832 226 aa12.26□□□□□ -0.45
PDGFD-202ENST00000393158 PTMSP20962 102 aa12.26□□□□□ -0.45
PDGFD-202ENST00000393158 CAMK4Q16566 473 aa12.26□□□□□ -0.45
PDGFD-202ENST00000393158 CCDC183Q5T5S1 534 aa12.26□□□□□ -0.45
PDGFD-202ENST00000393158 SPATC1LQ9H0A9 340 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms