RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 IGKV6D-41A0A0C4DH26 115 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 ATP2A1O14983 1001 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 PQBP1O60828 265 aaKnown RBP9.18□□□□□ -0.94
TRAV6-201ENST00000390428 SNAI1O95863 264 aaPredicted RBP9.18□□□□□ -0.94
TRAV6-201ENST00000390428 RAG1P15918 1043 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 ACLYP53396 1101 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 EPHB4P54760 987 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 NR6A1Q15406 480 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 C20orf194Q5TEA3 1177 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 MAMDC4Q6UXC1 1216 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 CPXCR1Q8N123 301 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 PRPF38AQ8NAV1 312 aaKnown RBP9.18□□□□□ -0.94
TRAV6-201ENST00000390428 KLHDC9Q8NEP7 349 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 GPKOWQ92917 476 aaPredicted RBP eCLIP9.18□□□□□ -0.94
TRAV6-201ENST00000390428 SYNGAP1Q96PV0 1343 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 TSEN34Q9BSV6 310 aaKnown RBP9.18□□□□□ -0.94
TRAV6-201ENST00000390428 TTYH1Q9H313 450 aaPredicted RBP9.18□□□□□ -0.94
TRAV6-201ENST00000390428 EPB41L4AQ9HCS5 686 aaPredicted RBP9.18□□□□□ -0.94
TRAV6-201ENST00000390428 STARD7Q9NQZ5 370 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 CLIP2Q9UDT6 1046 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 FAM184BQ9ULE4 1060 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 SYNRGQ9UMZ2 1314 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 RIPK3Q9Y572 518 aa9.18□□□□□ -0.94
TRAV6-201ENST00000390428 RNF113AO15541 343 aaKnown RBP9.17□□□□□ -0.94
TRAV6-201ENST00000390428 GPAA1O43292 621 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 ZBED4O75132 1171 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 DUSP11O75319 330 aaKnown RBP9.17□□□□□ -0.94
TRAV6-201ENST00000390428 ZFYP08048 801 aaPredicted RBP9.17□□□□□ -0.94
TRAV6-201ENST00000390428 GNAT2P19087 354 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 TDO2P48775 406 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 FPGSQ05932 587 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 FAAP100Q0VG06 881 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 NNTQ13423 1086 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 KCNA10Q16322 511 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 TSHZ3Q63HK5 1081 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 CCSAPQ6IQ19 270 aaPredicted RBP9.17□□□□□ -0.94
TRAV6-201ENST00000390428 ANKRD33Q7Z3H0 272 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 ZNF444Q8N0Y2 327 aaPredicted RBP9.17□□□□□ -0.94
TRAV6-201ENST00000390428 NUP133Q8WUM0 1156 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 MKL1Q969V6 931 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 KIFC2Q96AC6 838 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 CEP95Q96GE4 821 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 GPATCH3Q96I76 525 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 RNPC3Q96LT9 517 aaKnown RBP9.17□□□□□ -0.94
TRAV6-201ENST00000390428 TOX2Q96NM4 488 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 C1QTNF2Q9BXJ5 285 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 DCTPP1Q9H773 170 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 SLC38A10Q9HBR0 1119 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 ZNF287Q9HBT7 754 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 RAVER2Q9HCJ3 691 aaKnown RBP9.17□□□□□ -0.94
TRAV6-201ENST00000390428 TMEM39AQ9NV64 488 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 FEM1BQ9UK73 627 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 ZHX1Q9UKY1 873 aaPredicted RBP9.17□□□□□ -0.94
TRAV6-201ENST00000390428 SYNPO2Q9UMS6 1093 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 CUL9Q8IWT3 2517 aa9.17□□□□□ -0.94
TRAV6-201ENST00000390428 TMEM265A0A087WTH1 108 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 MYADML2A6NDP7 307 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 DCDC2CA8MYV0 355 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 PATL2C9JE40 543 aaKnown RBP9.16□□□□□ -0.94
TRAV6-201ENST00000390428 M0R2C6 588 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 CAPN5O15484 640 aaPredicted RBP9.16□□□□□ -0.94
TRAV6-201ENST00000390428 PRDM1O75626 825 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 TTLL1O95922 423 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 ADH1CP00326 375 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 CST5P28325 142 aaPredicted RBP9.16□□□□□ -0.94
TRAV6-201ENST00000390428 OAZ1P54368 228 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 ACVR2BQ13705 512 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 ARID5BQ14865 1188 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 IFNL3Q8IZI9 196 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 LRRC47Q8N1G4 583 aaKnown RBP9.16□□□□□ -0.94
TRAV6-201ENST00000390428 GMCL1P1Q8NEA9 526 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 CHST13Q8NET6 341 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 MAFAQ8NHW3 353 aaPredicted RBP9.16□□□□□ -0.94
TRAV6-201ENST00000390428 MYLIPQ8WY64 445 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 FGD4Q96M96 766 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 GLT1D1Q96MS3 346 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 MTMR4Q9NYA4 1195 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 FBXO40Q9UH90 709 aa9.16□□□□□ -0.94
TRAV6-201ENST00000390428 CTDP1Q9Y5B0 961 aaPredicted RBP9.16□□□□□ -0.94
TRAV6-201ENST00000390428 LCTP09848 1927 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 GBF1Q92538 1859 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 PLIN4Q96Q06 1357 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 ELP1O95163 1332 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 MROH7Q68CQ1 1323 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 ADCY6O43306 1168 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 APPP05067 770 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 C6orf222P0C671 652 aaPredicted RBP9.15□□□□□ -0.94
TRAV6-201ENST00000390428 CDK7P50613 346 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 PDXDC2PQ6P474 469 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 ARMCX2Q7L311 632 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 ANKRD35Q8N283 1001 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 PCSK9Q8NBP7 692 aaKnown RBP9.15□□□□□ -0.94
TRAV6-201ENST00000390428 NEDD1Q8NHV4 660 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 EPS8L1Q8TE68 723 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 UPF3AQ9H1J1 476 aaKnown RBP9.15□□□□□ -0.94
TRAV6-201ENST00000390428 ABHD16BQ9H3Z7 469 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 FKBPLQ9UIM3 349 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 TBX21Q9UL17 535 aa9.15□□□□□ -0.94
TRAV6-201ENST00000390428 TTC41PQ6P2S7 1318 aa9.14□□□□□ -0.95
TRAV6-201ENST00000390428 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms