RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 ABCB11O95342 1321 aa16.7■□□□□ 0.26
SCFD2-201ENST00000388940 F8W031 263 aaPredicted RBP16.69■□□□□ 0.26
SCFD2-201ENST00000388940 POTEB2H3BUK9 544 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 PPP1R11O60927 126 aaPredicted RBP16.69■□□□□ 0.26
SCFD2-201ENST00000388940 ABL1P00519 1130 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 MRPL12P52815 198 aaKnown RBP16.69■□□□□ 0.26
SCFD2-201ENST00000388940 ZBED6P86452 979 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 CDK17Q00537 523 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 PSMD2Q13200 908 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 MCM6Q14566 821 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 WHAMMP3Q1A5X7 153 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 KRT79Q5XKE5 535 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 APOBEC3HQ6NTF7 200 aaKnown RBP16.69■□□□□ 0.26
SCFD2-201ENST00000388940 RAD54LQ92698 747 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 CDK5RAP3Q96JB5 506 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 NAP1L4Q99733 375 aaKnown RBP16.69■□□□□ 0.26
SCFD2-201ENST00000388940 MRIQ9BWK5 157 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 SEMA6BQ9H3T3 888 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 PES1O00541 588 aaKnown RBP16.69■□□□□ 0.26
SCFD2-201ENST00000388940 ZBTB5O15062 677 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 GCFC2P16383 781 aaKnown RBP16.69■□□□□ 0.26
SCFD2-201ENST00000388940 MTIF2P46199 727 aaKnown RBP16.69■□□□□ 0.26
SCFD2-201ENST00000388940 EIF6P56537 245 aaKnown RBP16.69■□□□□ 0.26
SCFD2-201ENST00000388940 KRT83P78385 493 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 CCDC170Q8IYT3 715 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 NLGN1Q8N2Q7 840 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 GUF1Q8N442 669 aaKnown RBP16.69■□□□□ 0.26
SCFD2-201ENST00000388940 CUL5Q93034 780 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 TEKT1Q969V4 418 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 NOC4LQ9BVI4 516 aaKnown RBP16.69■□□□□ 0.26
SCFD2-201ENST00000388940 GLT8D2Q9H1C3 349 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 BRWD3Q6RI45 1802 aa16.69■□□□□ 0.26
SCFD2-201ENST00000388940 ADAMTSL1Q8N6G6 1762 aa16.68■□□□□ 0.26
SCFD2-201ENST00000388940 FGFR1OPO95684 399 aaKnown RBP16.68■□□□□ 0.26
SCFD2-201ENST00000388940 PLA2G4AP47712 749 aa16.68■□□□□ 0.26
SCFD2-201ENST00000388940 EHHADHQ08426 723 aa16.68■□□□□ 0.26
SCFD2-201ENST00000388940 BRD3Q15059 726 aa16.68■□□□□ 0.26
SCFD2-201ENST00000388940 EPC1Q9H2F5 836 aa16.68■□□□□ 0.26
SCFD2-201ENST00000388940 CCDC151A5D8V7 595 aa16.68■□□□□ 0.26
SCFD2-201ENST00000388940 PSMD14O00487 310 aa16.68■□□□□ 0.26
SCFD2-201ENST00000388940 SLC26A4O43511 780 aa16.68■□□□□ 0.26
SCFD2-201ENST00000388940 TRIM21P19474 475 aaKnown RBP16.68■□□□□ 0.26
SCFD2-201ENST00000388940 AMPD2Q01433 879 aa16.68■□□□□ 0.26
SCFD2-201ENST00000388940 SEPT2Q15019 361 aa16.68■□□□□ 0.26
SCFD2-201ENST00000388940 TTBK2Q6IQ55 1244 aa16.68■□□□□ 0.26
SCFD2-201ENST00000388940 CLEC10AQ8IUN9 316 aa16.68■□□□□ 0.26
SCFD2-201ENST00000388940 PROM2Q8N271 834 aa16.68■□□□□ 0.26
SCFD2-201ENST00000388940 MSANTD4Q8NCY6 345 aa16.68■□□□□ 0.26
SCFD2-201ENST00000388940 SLC39A2Q9NP94 309 aa16.68■□□□□ 0.26
SCFD2-201ENST00000388940 ZNHIT6Q9NWK9 470 aaKnown RBP16.68■□□□□ 0.26
SCFD2-201ENST00000388940 ATF5Q9Y2D1 282 aaPredicted RBP16.68■□□□□ 0.26
SCFD2-201ENST00000388940 ARFGEF1Q9Y6D6 1849 aa16.67■□□□□ 0.26
SCFD2-201ENST00000388940 CYLC1P35663 651 aaPredicted RBP16.67■□□□□ 0.26
SCFD2-201ENST00000388940 TNNI2P48788 182 aa16.67■□□□□ 0.26
SCFD2-201ENST00000388940 LRRC63Q05C16 580 aa16.67■□□□□ 0.26
SCFD2-201ENST00000388940 TERF2Q15554 542 aa16.67■□□□□ 0.26
SCFD2-201ENST00000388940 HYIQ5T013 277 aa16.67■□□□□ 0.26
SCFD2-201ENST00000388940 FKBP15Q5T1M5 1219 aa16.67■□□□□ 0.26
SCFD2-201ENST00000388940 TAF3Q5VWG9 929 aa16.67■□□□□ 0.26
SCFD2-201ENST00000388940 SNX29Q8TEQ0 813 aa16.67■□□□□ 0.26
SCFD2-201ENST00000388940 MKL1Q969V6 931 aa16.67■□□□□ 0.26
SCFD2-201ENST00000388940 UBXN6Q9BZV1 441 aa16.67■□□□□ 0.26
SCFD2-201ENST00000388940 ARFGAP3Q9NP61 516 aa16.67■□□□□ 0.26
SCFD2-201ENST00000388940 SIPA1L1O43166 1804 aa16.67■□□□□ 0.26
SCFD2-201ENST00000388940 POTEMA6NI47 508 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 EIF3CLB5ME19 914 aaKnown RBP16.66■□□□□ 0.26
SCFD2-201ENST00000388940 TRIM37O94972 964 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 TBC1D8O95759 1140 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 PDE6BP35913 854 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 SCNN1DP51172 638 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 HERVK_113P62684 666 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 DOK7Q18PE1 504 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 KRT27Q7Z3Y8 459 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 HNRNPLLQ8WVV9 542 aaKnown RBP16.66■□□□□ 0.26
SCFD2-201ENST00000388940 HAS1Q92839 578 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 ZDHHC15Q96MV8 337 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 EIF3CQ99613 913 aaKnown RBP16.66■□□□□ 0.26
SCFD2-201ENST00000388940 AGPAT5Q9NUQ2 364 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 DDX25Q9UHL0 483 aaKnown RBP16.66■□□□□ 0.26
SCFD2-201ENST00000388940 RAB21Q9UL25 225 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 HNRNPH3P31942 346 aaKnown RBP16.66■□□□□ 0.26
SCFD2-201ENST00000388940 FKBP1AP62942 108 aaKnown RBP16.66■□□□□ 0.26
SCFD2-201ENST00000388940 PODNQ7Z5L7 613 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 NUDT12Q9BQG2 462 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 MXD3Q9BW11 206 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 DHX36Q9H2U1 1008 aaKnown RBP16.66■□□□□ 0.26
SCFD2-201ENST00000388940 PSTPIP2Q9H939 334 aa16.66■□□□□ 0.26
SCFD2-201ENST00000388940 QTRT2Q9H974 415 aaKnown RBP16.66■□□□□ 0.26
SCFD2-201ENST00000388940 COL11A2P13942 1736 aaPredicted RBP16.65■□□□□ 0.26
SCFD2-201ENST00000388940 USP17L10C9JJH3 530 aa16.65■□□□□ 0.26
SCFD2-201ENST00000388940 SEC31AO94979 1220 aaKnown RBP16.65■□□□□ 0.26
SCFD2-201ENST00000388940 UBE2SQ16763 222 aa16.65■□□□□ 0.26
SCFD2-201ENST00000388940 CCDC96Q2M329 555 aa16.65■□□□□ 0.26
SCFD2-201ENST00000388940 VWA3BQ502W6 1294 aa16.65■□□□□ 0.26
SCFD2-201ENST00000388940 EHBP1Q8NDI1 1231 aa16.65■□□□□ 0.26
SCFD2-201ENST00000388940 HPS3Q969F9 1004 aa16.65■□□□□ 0.26
SCFD2-201ENST00000388940 ANKZF1Q9H8Y5 726 aa16.65■□□□□ 0.26
SCFD2-201ENST00000388940 PUF60Q9UHX1 559 aaKnown RBP16.65■□□□□ 0.26
SCFD2-201ENST00000388940 MYO6Q9UM54 1294 aa16.65■□□□□ 0.26
SCFD2-201ENST00000388940 CRKP46108 304 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms