RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 IQCEQ6IPM2 695 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 KLHL10Q6JEL2 608 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 USP17L2Q6R6M4 530 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 DAGLBQ8NCG7 672 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 PSMD1Q99460 953 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 NUP88Q99567 741 aaPredicted RBP9.97□□□□□ -0.81
GPNMB-202ENST00000381990 RWDD2AQ9UIY3 292 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 GREB1LQ9C091 1923 aaPredicted RBP9.97□□□□□ -0.81
GPNMB-202ENST00000381990 A0A087WUV0 522 aaPredicted RBP9.97□□□□□ -0.81
GPNMB-202ENST00000381990 A0A0U1RQJ8 604 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 YDJCA8MPS7 323 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 STXBP3O00186 592 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 TTLL1O95922 423 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 PDHBP11177 359 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 CD44P16070 742 aaKnown RBP9.97□□□□□ -0.81
GPNMB-202ENST00000381990 KRT31Q15323 416 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 ASPRV1Q53RT3 343 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 PIK3AP1Q6ZUJ8 805 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 HEATR3Q7Z4Q2 680 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 PACS2Q86VP3 889 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 SUGP1Q8IWZ8 645 aaKnown RBP9.97□□□□□ -0.81
GPNMB-202ENST00000381990 ZFPM1Q8IX07 1006 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 ATRIPQ8WXE1 791 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 RRP36Q96EU6 259 aaKnown RBP9.97□□□□□ -0.81
GPNMB-202ENST00000381990 FAM198AQ9UFP1 575 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 HPCAL4Q9UM19 191 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 PCDHAC2Q9Y5I4 1007 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 SAR1BQ9Y6B6 198 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 USP17L5A8MUK1 530 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 PHACTR2O75167 634 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 NDUFA10O95299 355 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 SNHG28P0DPA3 235 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 DPEP1P16444 411 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 GUCY2CP25092 1073 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 PAPD7Q5XG87 772 aaKnown RBP9.97□□□□□ -0.81
GPNMB-202ENST00000381990 TYW1BQ6NUM6 668 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 FOXR1Q6PIV2 292 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 DEF6Q9H4E7 631 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 PI4KBQ9UBF8 816 aa9.97□□□□□ -0.81
GPNMB-202ENST00000381990 EPN1Q9Y6I3 576 aaPredicted RBP9.97□□□□□ -0.81
GPNMB-202ENST00000381990 SIPA1L1O43166 1804 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 KIF13BQ9NQT8 1826 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 A6NNZ2 444 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 WNT7AO00755 349 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 KCNA3P22001 575 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 KRT9P35527 623 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 CACNB3P54284 484 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 KRT83P78385 493 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 ATP2C1P98194 919 aaPredicted RBP9.96□□□□□ -0.81
GPNMB-202ENST00000381990 TCP10Q12799 353 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 STIM1Q13586 685 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 ZNF174Q15697 407 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 TUBB8Q3ZCM7 444 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 GBP6Q6ZN66 633 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 TADA2BQ86TJ2 420 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 CRACR2AQ9BSW2 395 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 RIOX1Q9H6W3 641 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 RMND1Q9NWS8 449 aa9.96□□□□□ -0.81
GPNMB-202ENST00000381990 SEC63Q9UGP8 760 aaKnown RBP9.96□□□□□ -0.81
GPNMB-202ENST00000381990 ANO9A1A5B4 782 aa9.96□□□□□ -0.82
GPNMB-202ENST00000381990 M0R2N6 131 aa9.96□□□□□ -0.82
GPNMB-202ENST00000381990 ADAMTS3O15072 1205 aa9.96□□□□□ -0.82
GPNMB-202ENST00000381990 STX17P56962 302 aa9.96□□□□□ -0.82
GPNMB-202ENST00000381990 TCP11X2Q5H9J9 407 aa9.96□□□□□ -0.82
GPNMB-202ENST00000381990 NCAPH2Q6IBW4 605 aa9.96□□□□□ -0.82
GPNMB-202ENST00000381990 CCDC70Q6NSX1 233 aa9.96□□□□□ -0.82
GPNMB-202ENST00000381990 LRRC47Q8N1G4 583 aaKnown RBP9.96□□□□□ -0.82
GPNMB-202ENST00000381990 VPS33BQ9H267 617 aa9.96□□□□□ -0.82
GPNMB-202ENST00000381990 CPVLQ9H3G5 476 aa9.96□□□□□ -0.82
GPNMB-202ENST00000381990 CCDC194A0A1B0GVG4 234 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 DDTLA6NHG4 134 aaPredicted RBP9.95□□□□□ -0.82
GPNMB-202ENST00000381990 MPHOSPH10O00566 681 aaKnown RBP9.95□□□□□ -0.82
GPNMB-202ENST00000381990 ENTPD3O75355 529 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 AFMP43652 599 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 COPB1P53618 953 aaKnown RBP9.95□□□□□ -0.82
GPNMB-202ENST00000381990 PTGDRQ13258 359 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 TSR1Q2NL82 804 aaKnown RBP9.95□□□□□ -0.82
GPNMB-202ENST00000381990 USP49Q70CQ1 688 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 CLEC10AQ8IUN9 316 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 ZSCAN29Q8IWY8 852 aaPredicted RBP9.95□□□□□ -0.82
GPNMB-202ENST00000381990 OR8K1Q8NGG5 319 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 SYMPKQ92797 1274 aaKnown RBP9.95□□□□□ -0.82
GPNMB-202ENST00000381990 SLF1Q9BQI6 1058 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 ZMYND12Q9H0C1 365 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 DNAJC18Q9H819 358 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 ATRNL1Q5VV63 1379 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 MYH4Q9Y623 1939 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 ZC3H4Q9UPT8 1303 aaKnown RBP9.95□□□□□ -0.82
GPNMB-202ENST00000381990 A0A1W2PQC6 194 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 hCG_1984214I3L0E3 225 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 KRT86O43790 486 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 CCT6AP40227 531 aaKnown RBP9.95□□□□□ -0.82
GPNMB-202ENST00000381990 NAPAP54920 295 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 EIF6P56537 245 aaKnown RBP9.95□□□□□ -0.82
GPNMB-202ENST00000381990 PAK1Q13153 545 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 SEMA3FQ13275 785 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 SOGA3Q5TF21 947 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 RSBN1LQ6PCB5 846 aaPredicted RBP9.95□□□□□ -0.82
GPNMB-202ENST00000381990 SH3BP5LQ7L8J4 393 aa9.95□□□□□ -0.82
GPNMB-202ENST00000381990 LARGE2Q8N3Y3 721 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms