RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 OPLAHO14841 1288 aa13.4□□□□□ -0.26
SHOX-203ENST00000381578 POLR2FP61218 127 aaKnown RBP13.4□□□□□ -0.26
SHOX-203ENST00000381578 ANKRD42Q8N9B4 389 aa13.4□□□□□ -0.26
SHOX-203ENST00000381578 ELAC2Q9BQ52 826 aaKnown RBP13.4□□□□□ -0.26
SHOX-203ENST00000381578 PYM1Q9BRP8 204 aaKnown RBP13.4□□□□□ -0.26
SHOX-203ENST00000381578 TMEM110-MUSTN1A8MSY1 372 aa13.4□□□□□ -0.26
SHOX-203ENST00000381578 PALMO75781 387 aa13.4□□□□□ -0.26
SHOX-203ENST00000381578 TXKP42681 527 aa13.4□□□□□ -0.26
SHOX-203ENST00000381578 AMPD2Q01433 879 aa13.4□□□□□ -0.26
SHOX-203ENST00000381578 ZKSCAN8Q15776 578 aaPredicted RBP13.4□□□□□ -0.26
SHOX-203ENST00000381578 SLC9C1Q4G0N8 1177 aa13.4□□□□□ -0.26
SHOX-203ENST00000381578 NKX2-3Q8TAU0 364 aa13.4□□□□□ -0.26
SHOX-203ENST00000381578 MDM1Q8TC05 714 aa13.4□□□□□ -0.26
SHOX-203ENST00000381578 GREM2Q9H772 168 aa13.4□□□□□ -0.26
SHOX-203ENST00000381578 PXDNLA1KZ92 1463 aa13.4□□□□□ -0.26
SHOX-203ENST00000381578 USP54Q70EL1 1684 aa13.4□□□□□ -0.26
SHOX-203ENST00000381578 KRIT1O00522 736 aa13.4□□□□□ -0.27
SHOX-203ENST00000381578 FOXO4P98177 505 aa13.4□□□□□ -0.27
SHOX-203ENST00000381578 KLHL30Q0D2K2 578 aa13.4□□□□□ -0.27
SHOX-203ENST00000381578 CDKAL1Q5VV42 579 aa13.4□□□□□ -0.27
SHOX-203ENST00000381578 LBHD1Q9BQE6 289 aaPredicted RBP13.4□□□□□ -0.27
SHOX-203ENST00000381578 MLXIPLQ9NP71 852 aa13.4□□□□□ -0.27
SHOX-203ENST00000381578 SPATS2LQ9NUQ6 558 aaKnown RBP13.4□□□□□ -0.27
SHOX-203ENST00000381578 ALS2Q96Q42 1657 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 GLI1P08151 1106 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 SARSP49591 514 aaKnown RBP13.39□□□□□ -0.27
SHOX-203ENST00000381578 DHX9Q08211 1270 aaKnown RBP13.39□□□□□ -0.27
SHOX-203ENST00000381578 ZFYVE27Q5T4F4 411 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 LCORLQ8N3X6 602 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 MARCH10Q8NA82 808 aaPredicted RBP13.39□□□□□ -0.27
SHOX-203ENST00000381578 ADAMTS1Q9UHI8 967 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 SEMA3EO15041 775 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 UQCRFS1P1P0C7P4 283 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 PMS1P54277 932 aaKnown RBP13.39□□□□□ -0.27
SHOX-203ENST00000381578 TBC1D5Q92609 795 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 MKNK2Q9HBH9 465 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 ANO9A1A5B4 782 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 LRRC53A6NM62 1247 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 IRS4O14654 1257 aaPredicted RBP13.39□□□□□ -0.27
SHOX-203ENST00000381578 EEF1GP26641 437 aaKnown RBP13.39□□□□□ -0.27
SHOX-203ENST00000381578 SLC1A4P43007 532 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 AMPD3Q01432 767 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 MAEAQ7L5Y9 396 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
SHOX-203ENST00000381578 CCDC197Q8NCU1 140 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 STRBPQ96SI9 672 aaKnown RBP13.39□□□□□ -0.27
SHOX-203ENST00000381578 DDX47Q9H0S4 455 aaKnown RBP13.39□□□□□ -0.27
SHOX-203ENST00000381578 CAPN11Q9UMQ6 739 aa13.39□□□□□ -0.27
SHOX-203ENST00000381578 SATB1Q01826 763 aa13.38□□□□□ -0.27
SHOX-203ENST00000381578 TRADDQ15628 312 aa13.38□□□□□ -0.27
SHOX-203ENST00000381578 DNAAF5Q86Y56 855 aa13.38□□□□□ -0.27
SHOX-203ENST00000381578 SPATA5Q8NB90 893 aa13.38□□□□□ -0.27
SHOX-203ENST00000381578 BMP2KQ9NSY1 1161 aaPredicted RBP13.38□□□□□ -0.27
SHOX-203ENST00000381578 PALLDQ8WX93 1383 aa13.38□□□□□ -0.27
SHOX-203ENST00000381578 NBPF26B4DH59 902 aa13.38□□□□□ -0.27
SHOX-203ENST00000381578 TECP42680 631 aa13.38□□□□□ -0.27
SHOX-203ENST00000381578 PAPD7Q5XG87 772 aaKnown RBP13.38□□□□□ -0.27
SHOX-203ENST00000381578 NBPF10Q6P3W6 841 aaKnown RBP13.38□□□□□ -0.27
SHOX-203ENST00000381578 NBPF15Q8N660 670 aa13.38□□□□□ -0.27
SHOX-203ENST00000381578 L3MBTL1Q9Y468 752 aa13.38□□□□□ -0.27
SHOX-203ENST00000381578 XDHP47989 1333 aa13.38□□□□□ -0.27
SHOX-203ENST00000381578 BAZ2BQ9UIF8 2168 aaKnown RBP13.38□□□□□ -0.27
SHOX-203ENST00000381578 CCNT1O60563 726 aaKnown RBP13.37□□□□□ -0.27
SHOX-203ENST00000381578 FGFR1OPO95684 399 aaKnown RBP13.37□□□□□ -0.27
SHOX-203ENST00000381578 FCER1AP12319 257 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 GCFC2P16383 781 aaKnown RBP13.37□□□□□ -0.27
SHOX-203ENST00000381578 LIFRP42702 1097 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 NTRK3Q16288 839 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 CABP7Q86V35 215 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 LSM14BQ9BX40 385 aaKnown RBP13.37□□□□□ -0.27
SHOX-203ENST00000381578 MAGEB6P1A0A0J9YX57 407 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 HMGB1P1B2RPK0 211 aaPredicted RBP13.37□□□□□ -0.27
SHOX-203ENST00000381578 KIF5BP33176 963 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 BCAMP50895 628 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 GNPTABQ3T906 1256 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 RABL6Q3YEC7 729 aaPredicted RBP13.37□□□□□ -0.27
SHOX-203ENST00000381578 SFMBT2Q5VUG0 894 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 P2RX5Q93086 422 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 ACTR5Q9H9F9 607 aaPredicted RBP13.37□□□□□ -0.27
SHOX-203ENST00000381578 MPHOSPH10O00566 681 aaKnown RBP13.37□□□□□ -0.27
SHOX-203ENST00000381578 CPP00450 1065 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 NEFHP12036 1026 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 SESN3P58005 492 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 GIGYF2Q6Y7W6 1299 aaKnown RBP13.37□□□□□ -0.27
SHOX-203ENST00000381578 CCDC155Q8N6L0 562 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 NSMCE1Q8WV22 266 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 MIEF2Q96C03 454 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 CDCA7Q9BWT1 371 aaPredicted RBP13.37□□□□□ -0.27
SHOX-203ENST00000381578 KIF9Q9HAQ2 790 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 STRCQ7RTU9 1775 aa13.37□□□□□ -0.27
SHOX-203ENST00000381578 H7C1W4 665 aa13.36□□□□□ -0.27
SHOX-203ENST00000381578 DIAPH2O60879 1101 aa13.36□□□□□ -0.27
SHOX-203ENST00000381578 LACTBP83111 547 aaPredicted RBP13.36□□□□□ -0.27
SHOX-203ENST00000381578 DCAF17Q5H9S7 520 aaPredicted RBP13.36□□□□□ -0.27
SHOX-203ENST00000381578 HAUS3Q68CZ6 603 aa13.36□□□□□ -0.27
SHOX-203ENST00000381578 AENQ8WTP8 325 aaKnown RBP13.36□□□□□ -0.27
SHOX-203ENST00000381578 SEC16BQ96JE7 1060 aa13.36□□□□□ -0.27
SHOX-203ENST00000381578 VCPKMTQ9H867 229 aa13.36□□□□□ -0.27
SHOX-203ENST00000381578 GPR108Q9NPR9 543 aa13.36□□□□□ -0.27
SHOX-203ENST00000381578 TPX2Q9ULW0 747 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms